Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044693
CDS Infomation

pacid=37433711 polypeptide=PGSC0003DMP400030297 locus=PGSC0003DMG400017338 ID=PGSC0003DMT400044693.v4.03 annot-version=v4.03
Sequence

ATGCAGGGCCAAGATATATACAATTCAAAACAAGTGAGGGATAAACAAATAGTTCGCATC
CTTGGAAAGGCACCTGTAATTGCTGCAGCTGCCTACTTGAGGATGGCTGGAAGGCCACCT
GTTCTTCCATCCAACAACCTCTCTTATGCAGAGAACTTCTTGTACATGCTAGATTCATTA
GGTAATAGGTCTTACAAACCCAACCCTCGACTTGCTCGTGTAGTGGACATTCTCTTCATT
TTACATGCGGAGCATGAAATGAATTGCTCAACAGCAGCTGCGTGTCATCTTGCATCAAGC
GGTGTTGATGTGTACACAGCTATAGCTGGAGCGGTTGGTGCTTTGTATGGCCCCCTTCAT
GGAGGTGCAAATGAGGCCGTGCTCAGGATGCTCAGCGAGATTGCAAGTATTGACAATATT
CCAGAGTTCATTGAGGGCGTGAAAAACAGGAAGCGTAAGATGTCCGGTTTCGGGCACCGT
GTCTACAAAAATTATGATCCTAGAGCAAAAGTGATTAAGAAGCTAGCAGAAGAAGTATTT
TCCATTGTTGGCCGCGATCCTTTAATTGAGGTTGCTGTTGCTCTAGAAAAAGCTGCACTC
TCAGATGAGTATTTTGTAGAAAGGAAGTTGTACCCGAATGTCGATTTCTACTCTGGTTTA
ATCTACAGGGCAATAGGATTTCCCACGGAGTTCTTTCCGGTTTTATTCGCAATTCCTCGC
ATGGCTGGTTACTTAGCTCATTGGCGCGAGTCCCTTGACGATCCTGACACCAAGATAATG
AGACCAGCACAGGTGTATACTGGTGTATGGTTGCGTCACTATATGCCCCTCCAAGATCGA
TCACCTTCAGCCGAGACGGATAAGTTCGGTCAGGTATCAGTCTCCAACGCCACCAGGCGG
AGGTTAGCTGGTTCAGGTGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030297
PEP Infomation

pacid=37433711 transcript=PGSC0003DMT400044693 locus=PGSC0003DMG400017338 ID=PGSC0003DMT400044693.v4.03 annot-version=v4.03
Sequence

MQGQDIYNSKQVRDKQIVRILGKAPVIAAAAYLRMAGRPPVLPSNNLSYAENFLYMLDSL
GNRSYKPNPRLARVVDILFILHAEHEMNCSTAAACHLASSGVDVYTAIAGAVGALYGPLH
GGANEAVLRMLSEIASIDNIPEFIEGVKNRKRKMSGFGHRVYKNYDPRAKVIKKLAEEVF
SIVGRDPLIEVAVALEKAALSDEYFVERKLYPNVDFYSGLIYRAIGFPTEFFPVLFAIPR
MAGYLAHWRESLDDPDTKIMRPAQVYTGVWLRHYMPLQDRSPSAETDKFGQVSVSNATRR
RLAGSGD*

Transcript Sequence

Transcript ID

PGSC0003DMT400044693
Transcript Infomation

pacid=37433711 locus=PGSC0003DMG400017338 ID=PGSC0003DMT400044693.v4.03 annot-version=v4.03
Sequence

ATGCAGGGCCAAGATATATACAATTCAAAACAAGTGAGGGATAAACAAATAGTTCGCATC
CTTGGAAAGGCACCTGTAATTGCTGCAGCTGCCTACTTGAGGATGGCTGGAAGGCCACCT
GTTCTTCCATCCAACAACCTCTCTTATGCAGAGAACTTCTTGTACATGCTAGATTCATTA
GGTAATAGGTCTTACAAACCCAACCCTCGACTTGCTCGTGTAGTGGACATTCTCTTCATT
TTACATGCGGAGCATGAAATGAATTGCTCAACAGCAGCTGCGTGTCATCTTGCATCAAGC
GGTGTTGATGTGTACACAGCTATAGCTGGAGCGGTTGGTGCTTTGTATGGCCCCCTTCAT
GGAGGTGCAAATGAGGCCGTGCTCAGGATGCTCAGCGAGATTGCAAGTATTGACAATATT
CCAGAGTTCATTGAGGGCGTGAAAAACAGGAAGCGTAAGATGTCCGGTTTCGGGCACCGT
GTCTACAAAAATTATGATCCTAGAGCAAAAGTGATTAAGAAGCTAGCAGAAGAAGTATTT
TCCATTGTTGGCCGCGATCCTTTAATTGAGGTTGCTGTTGCTCTAGAAAAAGCTGCACTC
TCAGATGAGTATTTTGTAGAAAGGAAGTTGTACCCGAATGTCGATTTCTACTCTGGTTTA
ATCTACAGGGCAATAGGATTTCCCACGGAGTTCTTTCCGGTTTTATTCGCAATTCCTCGC
ATGGCTGGTTACTTAGCTCATTGGCGCGAGTCCCTTGACGATCCTGACACCAAGATAATG
AGACCAGCACAGGTGTATACTGGTGTATGGTTGCGTCACTATATGCCCCTCCAAGATCGA
TCACCTTCAGCCGAGACGGATAAGTTCGGTCAGGTATCAGTCTCCAACGCCACCAGGCGG
AGGTTAGCTGGTTCAGGTGACTAG