Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044620
CDS Infomation

pacid=37432495 polypeptide=PGSC0003DMP400030258 locus=PGSC0003DMG400017318 ID=PGSC0003DMT400044620.v4.03 annot-version=v4.03
Sequence

ATGACTTATATTTTCTTTCCTCGTGAAAATTTCTTCAGGCCATCTTCTGAGAGGAAACCA
GATCTTGGATGTTCACAGCTGACTTCCATTTACTGCCCCTCTTTGCAGTACCATAGTTTC
ATAGAGCTCAAGGATACCGCATATTTTTCATTTCAGTATAATCATGAACCAAGTTCGATC
ATATTTTGGCTTGAGGAGAAAAAGTTGGAAGATTGCAAAAGGGCCTGTCTGAGAAACTGT
TCATGCAAAGCTGCTGTTTTTGAATATAATTTGTATGGGAATCGAAGAGGGAGCTGTTTG
TTACTGAATGAAGTCTTCTCTCTCATAGACAACAACGGACAAGGAAGAGGCAAGACAGTA
TTTCTTACGGTGCAGAATCAGTCTTCAATCATTCCTGGAAGAAAGAAATCAAGACCTTTC
CAAGTGATTATAGGATCTACTCTTGCAGCTTTCTTCGGGATAATTTTAAGCATAGCTACT
TGCTTTGTTATCTTCAAAAAGAGGATACATGAGTCCAGAAAGGCTGCGGGTTTTCTTGAT
CTGGAACCAATCTTACCAGGAATTCTAACTCGATTCTCTTACAATGAGCTGAAAGTAATT
ACAAAAGATTTCAGTAGTAAGCTCGGGGAAGGAGGATTTGGATCTGTTTATGAAGGAACA
CTGAGAAATGGCACCAAAATAGCTGTGAAGCATCTGGATGGTCTAGGTCAAGTAAAGGAA
TCATTCTTAACAGAAGTTAAGGCAGTCGGTGGCATTCACCATATCAATCTGGTAAAACTC
ATTGGATTTTGTGCAGAAAAAAGCCACAGGTTTCTTATCTATGAGTACATGGTAAATGGA
TCATTGGATAGGTGGATTACGCATGAGAATCAAGAGAATGGGCTTACATGGAACACGAGG
CAGAGGATAATATCAGATATCGCCAAAGGCTTAGCGTATCTACATGAGGATTGCAGCCAT
AAGATAATTCCTTTGGACATCAAACCACAAAACATCCCTCTAGATCAATATCTCAATGCT
AAGATATCAGATTTTGGGTTGTCGAAGCTAATTGAGAAAGACAAAAGCAAAGTTGTGACT
AGAATGAGAGGAACACGGGGTTATTTAGCCCCTGAATGGTTGAGCTCAGTAATCATTGAG
AAAGTTGATGTTTATGCTTTTGGAATTGTCCTCTTGGAAATTCTCTGTGTGCGAAAGAAT
TTGGATTGGACCCAAGCTGATGAAGAAGATGTCCATTTGCTAAGTGTATTTAGGAGAAAA
GCTGAACAAGAGCAGCTCATGGATATGGTTGACAAAAACAACGAAGATATGCAGCTCCAC
AGGGAAGCAGTGACAGAAATGATGAGCCTAGCTGCATGGTGTCTACAGGGTGATTTTTCC
AAGAGGCCTTCCATGTCATTGGTGGTTAAGTCATTGGAAGGTTTGGTGACTGTTGAAACC
AACTTGGATTATGATTTCACACACGTACCTGAGGTCTGGGCAGGAAACCAACAGAGGGAA
GCCATTATCAGTTCAAAAATTCCTTCAATTTTATCGGGACGAAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030258
PEP Infomation

pacid=37432495 transcript=PGSC0003DMT400044620 locus=PGSC0003DMG400017318 ID=PGSC0003DMT400044620.v4.03 annot-version=v4.03
Sequence

MTYIFFPRENFFRPSSERKPDLGCSQLTSIYCPSLQYHSFIELKDTAYFSFQYNHEPSSI
IFWLEEKKLEDCKRACLRNCSCKAAVFEYNLYGNRRGSCLLLNEVFSLIDNNGQGRGKTV
FLTVQNQSSIIPGRKKSRPFQVIIGSTLAAFFGIILSIATCFVIFKKRIHESRKAAGFLD
LEPILPGILTRFSYNELKVITKDFSSKLGEGGFGSVYEGTLRNGTKIAVKHLDGLGQVKE
SFLTEVKAVGGIHHINLVKLIGFCAEKSHRFLIYEYMVNGSLDRWITHENQENGLTWNTR
QRIISDIAKGLAYLHEDCSHKIIPLDIKPQNIPLDQYLNAKISDFGLSKLIEKDKSKVVT
RMRGTRGYLAPEWLSSVIIEKVDVYAFGIVLLEILCVRKNLDWTQADEEDVHLLSVFRRK
AEQEQLMDMVDKNNEDMQLHREAVTEMMSLAAWCLQGDFSKRPSMSLVVKSLEGLVTVET
NLDYDFTHVPEVWAGNQQREAIISSKIPSILSGRR*

Transcript Sequence

Transcript ID

PGSC0003DMT400044620
Transcript Infomation

pacid=37432495 locus=PGSC0003DMG400017318 ID=PGSC0003DMT400044620.v4.03 annot-version=v4.03
Sequence

ATGACTTATATTTTCTTTCCTCGTGAAAATTTCTTCAGGCCATCTTCTGAGAGGAAACCA
GATCTTGGATGTTCACAGCTGACTTCCATTTACTGCCCCTCTTTGCAGTACCATAGTTTC
ATAGAGCTCAAGGATACCGCATATTTTTCATTTCAGTATAATCATGAACCAAGTTCGATC
ATATTTTGGCTTGAGGAGAAAAAGTTGGAAGATTGCAAAAGGGCCTGTCTGAGAAACTGT
TCATGCAAAGCTGCTGTTTTTGAATATAATTTGTATGGGAATCGAAGAGGGAGCTGTTTG
TTACTGAATGAAGTCTTCTCTCTCATAGACAACAACGGACAAGGAAGAGGCAAGACAGTA
TTTCTTACGGTGCAGAATCAGTCTTCAATCATTCCTGGAAGAAAGAAATCAAGACCTTTC
CAAGTGATTATAGGATCTACTCTTGCAGCTTTCTTCGGGATAATTTTAAGCATAGCTACT
TGCTTTGTTATCTTCAAAAAGAGGATACATGAGTCCAGAAAGGCTGCGGGTTTTCTTGAT
CTGGAACCAATCTTACCAGGAATTCTAACTCGATTCTCTTACAATGAGCTGAAAGTAATT
ACAAAAGATTTCAGTAGTAAGCTCGGGGAAGGAGGATTTGGATCTGTTTATGAAGGAACA
CTGAGAAATGGCACCAAAATAGCTGTGAAGCATCTGGATGGTCTAGGTCAAGTAAAGGAA
TCATTCTTAACAGAAGTTAAGGCAGTCGGTGGCATTCACCATATCAATCTGGTAAAACTC
ATTGGATTTTGTGCAGAAAAAAGCCACAGGTTTCTTATCTATGAGTACATGGTAAATGGA
TCATTGGATAGGTGGATTACGCATGAGAATCAAGAGAATGGGCTTACATGGAACACGAGG
CAGAGGATAATATCAGATATCGCCAAAGGCTTAGCGTATCTACATGAGGATTGCAGCCAT
AAGATAATTCCTTTGGACATCAAACCACAAAACATCCCTCTAGATCAATATCTCAATGCT
AAGATATCAGATTTTGGGTTGTCGAAGCTAATTGAGAAAGACAAAAGCAAAGTTGTGACT
AGAATGAGAGGAACACGGGGTTATTTAGCCCCTGAATGGTTGAGCTCAGTAATCATTGAG
AAAGTTGATGTTTATGCTTTTGGAATTGTCCTCTTGGAAATTCTCTGTGTGCGAAAGAAT
TTGGATTGGACCCAAGCTGATGAAGAAGATGTCCATTTGCTAAGTGTATTTAGGAGAAAA
GCTGAACAAGAGCAGCTCATGGATATGGTTGACAAAAACAACGAAGATATGCAGCTCCAC
AGGGAAGCAGTGACAGAAATGATGAGCCTAGCTGCATGGTGTCTACAGGGTGATTTTTCC
AAGAGGCCTTCCATGTCATTGGTGGTTAAGTCATTGGAAGGTTTGGTGACTGTTGAAACC
AACTTGGATTATGATTTCACACACGTACCTGAGGTCTGGGCAGGAAACCAACAGAGGGAA
GCCATTATCAGTTCAAAAATTCCTTCAATTTTATCGGGACGAAGGTAA