Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044611
CDS Infomation

pacid=37433066 polypeptide=PGSC0003DMP400030257 locus=PGSC0003DMG400017317 ID=PGSC0003DMT400044611.v4.03 annot-version=v4.03
Sequence

ATGAATCAGGAAAGTTCATTGCTTCCATCCCCAGAAATTATTCGATGGAGTTACGATGTT
TTCTTAAGTTTTAAAGGTGAAGATATACGCAAAACATTTGTTGACCATCTGTATCTTGCT
CTGCAACAAAAGTGCATTAATACCTTCAAAGATGACGAGAAACTAGAGAAAGGAAAGTTC
ATTTCACCGGAACTCGAGAGTTCAATTGAAGAGTCAAGGATAGCTTTGATCATATTCTCT
AAAAACTATGCTAATTCAACATGGTGTTTAGATGAATTGACAAAGATCATGGAGTGCAAG
AATGTGAAAGGACAAATTGTTGTTCCGGTGTTCTATGATGTAGATCCATCAACAGTGAGG
AAACAAAAAACGATATTTGGAGAAGCATTTAGCAAACATGAAGCCCGGTTCCAGGAGGAC
AAGGTGCAAAAATGGAGGGCAGCACTGGAGGAAGCAGCTAATATTTCTGGCTGGGATTTG
CCAAATACTGCCAATGGACATGAAGCTAGAGTCATAGAGAAAATTGCAGAAGATATAATG
GCTAGATTGGGTACTCAGAGACATGCAAGCAATGCTAGAAATCTTGTTGGAATGGAGTTA
CACATGCACCAAGTATATAAAATGCTTGACGTTGGGTCTGGTGGAGTTCGCTTCCTTGGG
ATACTGGGAATGAGTGGAGTGGGGAAGACAACTCTTGCAAGAGTTATTTGTGATAACATT
CGGAGTCAATTTCAAGGTGCATGTTTTCTTCACGAAGTCAGAGACCGTTCAGCAAAACAG
GGACTAGAGCGCTTGCAAGAGATACTTCTTTCTGAGATCCTTGGTGTAAAAAAACTAAGG
ATCAATGATTCGTTTGAAGGAGCTAATATGCAAAAACAAAGACTACGGTATAAAAAGGTT
CTTCTTGTTCTGGATGATGTTGATCACATAGAACAGTTAGACGCATTAGCCGGGGAGCGT
GAATGGTTTGGTGACGGAAGTAGAATCATCATAACAACCAAAGACAAACACTTGCTTGTT
AAGTATGAGACTGAAAAGATATACAGAATGGGAACTTTAGACAAATATGAAAGCTTACAA
CTTTTTAAACAACATGCTTTCAAGAAAAACCACCCTACCAAAGAATTTGAGGATCTATCA
GCTCAAGTGATAGAGCATACTGGTGGACTCCCCCTAGCCCTGAAAGTCCTTGGCAGTTTC
TTGTATGGAAGAGGTTTGGATGAATGGATAAGTGAAGTGGAGCGTTTGAAACAAATCCCA
CAAAATGAAATTTTGAAGAAACTCGAACCAAGTTTCACTCGTCTCAACAATATTGAGCAA
AAGATATTCTTAGACATTGCATGCTTCTTTTCAGGGAAGAACAAAGATTCAGTGACCAGA
ATACTTGAGAGTTTTCATTTTAGCCCTGTCATTGGGATAAAAGTTCTCATGGAGAAATGT
TTGATCACTATATTAAAAGGTCGCATTATAATACACCAATTGATACAAGAAATGGGCTGG
CACATTGTTCGTCAAGAAGCTTCTTACAATCCAAGAATATGTAGTAGGTTGTGGAAGCGC
GAAGATATTTGTCCTGTACTCGAACGAAATTTGGCAACTGACAAGATTGAAGGCATATCG
CTGCACCTGACTAATGAAGAAGAAGTTAATTTTGGTGGCAAGGCCTTCATGCAGATGACC
AGTATGAGGTTTCTCAAATTCCGGAATGCATATGTTTGCCAGGGACCTGAATTTCTTCCT
GATGAGTTGAGGTGGCTTGATTGGCATGGATATCCTTCAAAAAGTCTGCCAAATAGCTTT
AAGGGAGACCAACTTGTTAGTTTGAAATTGAAAAAAAGCCGCATCATACAACTTTGGAAA
ACCTCAAAGGATCTAGGAAAACTGAAGTACATGAACCTTAGCCATTCACAGAAGCTAATA
AGGATGCCAGATTTTTCAGTTATGCCTAATCTTGAAAGGCTGGTTCTTGAAGAATGCACA
AGTTTGGTAGAAATCAATTTTTCTATTGGAGATCTTGGAAAGCTAGTCTTGCTGAATCTG
AAGAACTGCAGAAATTTGAAGACCATACCAAAGAGAATTCGCTTGGAAAAGCTTGAAATT
CTCGTTCTTTCAGGCTGCTCAAAGTTAAGAACATTCCCGGAAATAGAAGAGAAAATGAAT
CGTTTAGCAGAACTGTATTTGGGCGCGACTGCTTTGAGTGAACTACCTGCATCAGTTGAG
AACTTTTCAGGAGTTGGTGTAATAAATCTAAGTTACTGCAAGCATCTTGAGAGTCTACCT
AGCAGTATTTTTAGGTTGAAATGTCTGAAGACACTCGATGTGTCTGGATGCTCAAAACTT
AAAAATTTACCAGATGATTTGGGACTTTTAGTTGGTTTAGAGGAGCTCCACTGCACTCAC
ACAGCCATCCAAACAATTCCATCCTCTATGTCTCTTCTTAAAAACCTTAAACATTTATAT
CTCCGTGGATGTACTGCTTTGAGTTCACAAGTAAATAGCTCAAGTTGTGGCCAGAAGTCT
ATGGGTGTAAATTTTCAGAATTTGTCGGGTCTTTGTTCATTGATCATGTTGGATCTTAGT
GACTGCAAAATTTCAGATGGAGGCATTTTAAGTAATCTTGGGTTCTTACCGTCTTTGGAG
GGATTGATTCTCGATGGTAACAATTTTTCCAATATTGCGGCTTCAAGCATAAGTCGTCTC
ACTCGACTTATAGCCCTTGCATTGGCTGGTTGTAGGAGACTTGAGAGTTTACCGGAACTT
CCTCCAAGTATAAAAAAGATATATGCTGATGAATGCACGTCTTTGATGAGCATTGATCAG
CTAACCAAATATCCAATGTTGCATAGACTTTCATTCACAAAATGTCATCAACTTGTAAAA
AATAAACAACACGCCTCCATGGTTGATTCATTGTTGAAGCAGATGCACAAGGGACTATAC
ATGAATGGCTCATTTAGTATGTGCTTCCCTGGTGTGGAGATTCCCGAGTGGTTTACATAC
AAGAACTCGGGGACTGAATCAATCTCAGTGGCCCTGCCCAAAAATTGGTACACACCCACA
TTCAGGGGGATAACTATTTGTGTTGTTTTTGACATGATGACTCCTTTCATTTACCGGAAA
TATAAGTCGGATGATGCCTTCAGTATTCTTAATGTCAAATGCCTAAAAAAATTCCAAGGA
CTTGTGATGGGGTTTAGGTTCACAACCCATGACGGTTTTTCACGCAGATTTGGCAAGTGT
GTAGGCTCAATAGGAAGTGAAAAACCTGTTGGTTTAGATAATACTTACCTAGCCCATGTA
CCATTTCATCAGTATCCGAAGTATGATGATAATTACATTTTTAATGACTTCATTCAGCTT
GAGGTTCGTGTCGGTTCTGGTATCATTCATCCGGATTTAGTGGTCAAAGGTTTGGGAGCG
CGTCTTGTGTATGAGAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030257
PEP Infomation

pacid=37433066 transcript=PGSC0003DMT400044611 locus=PGSC0003DMG400017317 ID=PGSC0003DMT400044611.v4.03 annot-version=v4.03
Sequence

MNQESSLLPSPEIIRWSYDVFLSFKGEDIRKTFVDHLYLALQQKCINTFKDDEKLEKGKF
ISPELESSIEESRIALIIFSKNYANSTWCLDELTKIMECKNVKGQIVVPVFYDVDPSTVR
KQKTIFGEAFSKHEARFQEDKVQKWRAALEEAANISGWDLPNTANGHEARVIEKIAEDIM
ARLGTQRHASNARNLVGMELHMHQVYKMLDVGSGGVRFLGILGMSGVGKTTLARVICDNI
RSQFQGACFLHEVRDRSAKQGLERLQEILLSEILGVKKLRINDSFEGANMQKQRLRYKKV
LLVLDDVDHIEQLDALAGEREWFGDGSRIIITTKDKHLLVKYETEKIYRMGTLDKYESLQ
LFKQHAFKKNHPTKEFEDLSAQVIEHTGGLPLALKVLGSFLYGRGLDEWISEVERLKQIP
QNEILKKLEPSFTRLNNIEQKIFLDIACFFSGKNKDSVTRILESFHFSPVIGIKVLMEKC
LITILKGRIIIHQLIQEMGWHIVRQEASYNPRICSRLWKREDICPVLERNLATDKIEGIS
LHLTNEEEVNFGGKAFMQMTSMRFLKFRNAYVCQGPEFLPDELRWLDWHGYPSKSLPNSF
KGDQLVSLKLKKSRIIQLWKTSKDLGKLKYMNLSHSQKLIRMPDFSVMPNLERLVLEECT
SLVEINFSIGDLGKLVLLNLKNCRNLKTIPKRIRLEKLEILVLSGCSKLRTFPEIEEKMN
RLAELYLGATALSELPASVENFSGVGVINLSYCKHLESLPSSIFRLKCLKTLDVSGCSKL
KNLPDDLGLLVGLEELHCTHTAIQTIPSSMSLLKNLKHLYLRGCTALSSQVNSSSCGQKS
MGVNFQNLSGLCSLIMLDLSDCKISDGGILSNLGFLPSLEGLILDGNNFSNIAASSISRL
TRLIALALAGCRRLESLPELPPSIKKIYADECTSLMSIDQLTKYPMLHRLSFTKCHQLVK
NKQHASMVDSLLKQMHKGLYMNGSFSMCFPGVEIPEWFTYKNSGTESISVALPKNWYTPT
FRGITICVVFDMMTPFIYRKYKSDDAFSILNVKCLKKFQGLVMGFRFTTHDGFSRRFGKC
VGSIGSEKPVGLDNTYLAHVPFHQYPKYDDNYIFNDFIQLEVRVGSGIIHPDLVVKGLGA
RLVYEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400044611
Transcript Infomation

pacid=37433066 locus=PGSC0003DMG400017317 ID=PGSC0003DMT400044611.v4.03 annot-version=v4.03
Sequence

ATGAATCAGGAAAGTTCATTGCTTCCATCCCCAGAAATTATTCGATGGAGTTACGATGTT
TTCTTAAGTTTTAAAGGTGAAGATATACGCAAAACATTTGTTGACCATCTGTATCTTGCT
CTGCAACAAAAGTGCATTAATACCTTCAAAGATGACGAGAAACTAGAGAAAGGAAAGTTC
ATTTCACCGGAACTCGAGAGTTCAATTGAAGAGTCAAGGATAGCTTTGATCATATTCTCT
AAAAACTATGCTAATTCAACATGGTGTTTAGATGAATTGACAAAGATCATGGAGTGCAAG
AATGTGAAAGGACAAATTGTTGTTCCGGTGTTCTATGATGTAGATCCATCAACAGTGAGG
AAACAAAAAACGATATTTGGAGAAGCATTTAGCAAACATGAAGCCCGGTTCCAGGAGGAC
AAGGTGCAAAAATGGAGGGCAGCACTGGAGGAAGCAGCTAATATTTCTGGCTGGGATTTG
CCAAATACTGCCAATGGACATGAAGCTAGAGTCATAGAGAAAATTGCAGAAGATATAATG
GCTAGATTGGGTACTCAGAGACATGCAAGCAATGCTAGAAATCTTGTTGGAATGGAGTTA
CACATGCACCAAGTATATAAAATGCTTGACGTTGGGTCTGGTGGAGTTCGCTTCCTTGGG
ATACTGGGAATGAGTGGAGTGGGGAAGACAACTCTTGCAAGAGTTATTTGTGATAACATT
CGGAGTCAATTTCAAGGTGCATGTTTTCTTCACGAAGTCAGAGACCGTTCAGCAAAACAG
GGACTAGAGCGCTTGCAAGAGATACTTCTTTCTGAGATCCTTGGTGTAAAAAAACTAAGG
ATCAATGATTCGTTTGAAGGAGCTAATATGCAAAAACAAAGACTACGGTATAAAAAGGTT
CTTCTTGTTCTGGATGATGTTGATCACATAGAACAGTTAGACGCATTAGCCGGGGAGCGT
GAATGGTTTGGTGACGGAAGTAGAATCATCATAACAACCAAAGACAAACACTTGCTTGTT
AAGTATGAGACTGAAAAGATATACAGAATGGGAACTTTAGACAAATATGAAAGCTTACAA
CTTTTTAAACAACATGCTTTCAAGAAAAACCACCCTACCAAAGAATTTGAGGATCTATCA
GCTCAAGTGATAGAGCATACTGGTGGACTCCCCCTAGCCCTGAAAGTCCTTGGCAGTTTC
TTGTATGGAAGAGGTTTGGATGAATGGATAAGTGAAGTGGAGCGTTTGAAACAAATCCCA
CAAAATGAAATTTTGAAGAAACTCGAACCAAGTTTCACTCGTCTCAACAATATTGAGCAA
AAGATATTCTTAGACATTGCATGCTTCTTTTCAGGGAAGAACAAAGATTCAGTGACCAGA
ATACTTGAGAGTTTTCATTTTAGCCCTGTCATTGGGATAAAAGTTCTCATGGAGAAATGT
TTGATCACTATATTAAAAGGTCGCATTATAATACACCAATTGATACAAGAAATGGGCTGG
CACATTGTTCGTCAAGAAGCTTCTTACAATCCAAGAATATGTAGTAGGTTGTGGAAGCGC
GAAGATATTTGTCCTGTACTCGAACGAAATTTGGCAACTGACAAGATTGAAGGCATATCG
CTGCACCTGACTAATGAAGAAGAAGTTAATTTTGGTGGCAAGGCCTTCATGCAGATGACC
AGTATGAGGTTTCTCAAATTCCGGAATGCATATGTTTGCCAGGGACCTGAATTTCTTCCT
GATGAGTTGAGGTGGCTTGATTGGCATGGATATCCTTCAAAAAGTCTGCCAAATAGCTTT
AAGGGAGACCAACTTGTTAGTTTGAAATTGAAAAAAAGCCGCATCATACAACTTTGGAAA
ACCTCAAAGGATCTAGGAAAACTGAAGTACATGAACCTTAGCCATTCACAGAAGCTAATA
AGGATGCCAGATTTTTCAGTTATGCCTAATCTTGAAAGGCTGGTTCTTGAAGAATGCACA
AGTTTGGTAGAAATCAATTTTTCTATTGGAGATCTTGGAAAGCTAGTCTTGCTGAATCTG
AAGAACTGCAGAAATTTGAAGACCATACCAAAGAGAATTCGCTTGGAAAAGCTTGAAATT
CTCGTTCTTTCAGGCTGCTCAAAGTTAAGAACATTCCCGGAAATAGAAGAGAAAATGAAT
CGTTTAGCAGAACTGTATTTGGGCGCGACTGCTTTGAGTGAACTACCTGCATCAGTTGAG
AACTTTTCAGGAGTTGGTGTAATAAATCTAAGTTACTGCAAGCATCTTGAGAGTCTACCT
AGCAGTATTTTTAGGTTGAAATGTCTGAAGACACTCGATGTGTCTGGATGCTCAAAACTT
AAAAATTTACCAGATGATTTGGGACTTTTAGTTGGTTTAGAGGAGCTCCACTGCACTCAC
ACAGCCATCCAAACAATTCCATCCTCTATGTCTCTTCTTAAAAACCTTAAACATTTATAT
CTCCGTGGATGTACTGCTTTGAGTTCACAAGTAAATAGCTCAAGTTGTGGCCAGAAGTCT
ATGGGTGTAAATTTTCAGAATTTGTCGGGTCTTTGTTCATTGATCATGTTGGATCTTAGT
GACTGCAAAATTTCAGATGGAGGCATTTTAAGTAATCTTGGGTTCTTACCGTCTTTGGAG
GGATTGATTCTCGATGGTAACAATTTTTCCAATATTGCGGCTTCAAGCATAAGTCGTCTC
ACTCGACTTATAGCCCTTGCATTGGCTGGTTGTAGGAGACTTGAGAGTTTACCGGAACTT
CCTCCAAGTATAAAAAAGATATATGCTGATGAATGCACGTCTTTGATGAGCATTGATCAG
CTAACCAAATATCCAATGTTGCATAGACTTTCATTCACAAAATGTCATCAACTTGTAAAA
AATAAACAACACGCCTCCATGGTTGATTCATTGTTGAAGCAGATGCACAAGGGACTATAC
ATGAATGGCTCATTTAGTATGTGCTTCCCTGGTGTGGAGATTCCCGAGTGGTTTACATAC
AAGAACTCGGGGACTGAATCAATCTCAGTGGCCCTGCCCAAAAATTGGTACACACCCACA
TTCAGGGGGATAACTATTTGTGTTGTTTTTGACATGATGACTCCTTTCATTTACCGGAAA
TATAAGTCGGATGATGCCTTCAGTATTCTTAATGTCAAATGCCTAAAAAAATTCCAAGGA
CTTGTGATGGGGTTTAGGTTCACAACCCATGACGGTTTTTCACGCAGATTTGGCAAGTGT
GTAGGCTCAATAGGAAGTGAAAAACCTGTTGGTTTAGATAATACTTACCTAGCCCATGTA
CCATTTCATCAGTATCCGAAGTATGATGATAATTACATTTTTAATGACTTCATTCAGCTT
GAGGTTCGTGTCGGTTCTGGTATCATTCATCCGGATTTAGTGGTCAAAGGTTTGGGAGCG
CGTCTTGTGTATGAGAATTGA