Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044607
CDS Infomation

pacid=37434585 polypeptide=PGSC0003DMP400030254 locus=PGSC0003DMG400017314 ID=PGSC0003DMT400044607.v4.03 annot-version=v4.03
Sequence

ATGGATTGTGTTCAATTTATAGTAATATCATCTTGTTCTGCCATAGCGATTACTCTATTG
TTGTGTCTATGGAGAGTTCTGAACTGGATTTGGTTCAGGCCGAAGAAATTGGAGAAGTTA
CTGAAAGAACAAGGCGTGAAGGGCAATTCGTACTCGATATTGTATGGGGACACAAAAGAA
CTTTCTCTGAGGATTAAAGAAGTTACATCCAAATCCATGAGTCTTTACGATGATGATATA
GCACAAAGATCGATGCCTTTCTTTCTTGACACCATCAAGAAATATGGGAAGAAATCATTT
ATATGGTTGGGTCCAAAACCACTGGTGTTCATCATGGATCCTGACCTTATAAAGGAAGTA
TTCACAAAAACATACATTTATCAAAAGACGAAAACAAATCCGTTAACCAAGTTACTTGCA
CAAGGACTAGTAAGAGAGGAGGGAGACAAATGGGCTAAACATAGAAAAATCATCAATCCC
GCCTTCCATCTAGAGAAGCTAAAGCATATGCTTCCAGCTTTTTGTTTGAGCTGTACTGAG
ATGCTAAGTAAATGGGAAGACATTGTTTCGGTTGAGAGAGCATACGAGATAGATGTATGG
CCTCACCTTCAACAATTGACTAGTGATGTGATCTCTCGAACAGCTTTTGGCAGTAGTTAC
GAAGAAGGTAGAAGAATATTTGAACTTCAAACAGAACAAGCTCAGTATTTCATTGAAGCT
GTACGCTCGGTTTATATCCCAGGGTGGAGTTTTTTGCCAACAAAGAGGAATCGAAGAATG
AAGGAAATCGAAAGGCATGTTCAGGCTACAATTAGAGGTATTATTGATAAAAGAGTGAAG
GCAATGAAAGGAGGAGAGGCGAATAACGAGGATCTACTTGGTATATTGCTCGAATCAAAT
TTTAAAGAAATCGAACAGCATGGAGACAAGAATTTCGGACTTAGCATTGAAGAAGTCATT
GAAGAATGCAAGTTGTTCTATTTTGCTGGACAAGAAACTACATCGGCGTTGCTTGTATGG
ACTCTAATTTTGTTGTGCAGGCATCATGATTGGCAGACACGGGCAAGAGAAGAGGTGTTG
CAAGTGTTTGGGAATCGGAAACCAGATTTTGATGGACTGAATCATCTAAAAGTTGTGACA
ATGATCTTGTACGAGTCGTTAAGGTTATACCCTCCAGTAATGACAGTTACACGCCGGCTT
AATGAAGACACTGTACTAGGAGATATGTCTCTACCAGCAGGTGTGCTACTCTCCTTACCA
GCGGTCTTATTACATCACGATGAAGAGATATGGGGTGAAGATGCAAAGAAATTCAATCCA
GAGAGATTTAGAGAAGGTGTCTCAAGTGCAACGAAGGGTCAAGTCACTTTCTTCCCATTT
ACATGGGGTCCTAGAATATGCATTGGACAAAACTTCGCCATGTTAGAAGCAAAGATGGTG
TTGGCTATGATCCTACAACGTTTCTCGTTCGATTTATCTTCATCTTATGCTCATGCTCCT
CATTCCGTTATAACTACGCAACCCCAATATGGTGCTCCACTTATTCTGCACAGACTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400030254
PEP Infomation

pacid=37434585 transcript=PGSC0003DMT400044607 locus=PGSC0003DMG400017314 ID=PGSC0003DMT400044607.v4.03 annot-version=v4.03
Sequence

MDCVQFIVISSCSAIAITLLLCLWRVLNWIWFRPKKLEKLLKEQGVKGNSYSILYGDTKE
LSLRIKEVTSKSMSLYDDDIAQRSMPFFLDTIKKYGKKSFIWLGPKPLVFIMDPDLIKEV
FTKTYIYQKTKTNPLTKLLAQGLVREEGDKWAKHRKIINPAFHLEKLKHMLPAFCLSCTE
MLSKWEDIVSVERAYEIDVWPHLQQLTSDVISRTAFGSSYEEGRRIFELQTEQAQYFIEA
VRSVYIPGWSFLPTKRNRRMKEIERHVQATIRGIIDKRVKAMKGGEANNEDLLGILLESN
FKEIEQHGDKNFGLSIEEVIEECKLFYFAGQETTSALLVWTLILLCRHHDWQTRAREEVL
QVFGNRKPDFDGLNHLKVVTMILYESLRLYPPVMTVTRRLNEDTVLGDMSLPAGVLLSLP
AVLLHHDEEIWGEDAKKFNPERFREGVSSATKGQVTFFPFTWGPRICIGQNFAMLEAKMV
LAMILQRFSFDLSSSYAHAPHSVITTQPQYGAPLILHRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400044607
Transcript Infomation

pacid=37434585 locus=PGSC0003DMG400017314 ID=PGSC0003DMT400044607.v4.03 annot-version=v4.03
Sequence

ATGGATTGTGTTCAATTTATAGTAATATCATCTTGTTCTGCCATAGCGATTACTCTATTG
TTGTGTCTATGGAGAGTTCTGAACTGGATTTGGTTCAGGCCGAAGAAATTGGAGAAGTTA
CTGAAAGAACAAGGCGTGAAGGGCAATTCGTACTCGATATTGTATGGGGACACAAAAGAA
CTTTCTCTGAGGATTAAAGAAGTTACATCCAAATCCATGAGTCTTTACGATGATGATATA
GCACAAAGATCGATGCCTTTCTTTCTTGACACCATCAAGAAATATGGGAAGAAATCATTT
ATATGGTTGGGTCCAAAACCACTGGTGTTCATCATGGATCCTGACCTTATAAAGGAAGTA
TTCACAAAAACATACATTTATCAAAAGACGAAAACAAATCCGTTAACCAAGTTACTTGCA
CAAGGACTAGTAAGAGAGGAGGGAGACAAATGGGCTAAACATAGAAAAATCATCAATCCC
GCCTTCCATCTAGAGAAGCTAAAGCATATGCTTCCAGCTTTTTGTTTGAGCTGTACTGAG
ATGCTAAGTAAATGGGAAGACATTGTTTCGGTTGAGAGAGCATACGAGATAGATGTATGG
CCTCACCTTCAACAATTGACTAGTGATGTGATCTCTCGAACAGCTTTTGGCAGTAGTTAC
GAAGAAGGTAGAAGAATATTTGAACTTCAAACAGAACAAGCTCAGTATTTCATTGAAGCT
GTACGCTCGGTTTATATCCCAGGGTGGAGTTTTTTGCCAACAAAGAGGAATCGAAGAATG
AAGGAAATCGAAAGGCATGTTCAGGCTACAATTAGAGGTATTATTGATAAAAGAGTGAAG
GCAATGAAAGGAGGAGAGGCGAATAACGAGGATCTACTTGGTATATTGCTCGAATCAAAT
TTTAAAGAAATCGAACAGCATGGAGACAAGAATTTCGGACTTAGCATTGAAGAAGTCATT
GAAGAATGCAAGTTGTTCTATTTTGCTGGACAAGAAACTACATCGGCGTTGCTTGTATGG
ACTCTAATTTTGTTGTGCAGGCATCATGATTGGCAGACACGGGCAAGAGAAGAGGTGTTG
CAAGTGTTTGGGAATCGGAAACCAGATTTTGATGGACTGAATCATCTAAAAGTTGTGACA
ATGATCTTGTACGAGTCGTTAAGGTTATACCCTCCAGTAATGACAGTTACACGCCGGCTT
AATGAAGACACTGTACTAGGAGATATGTCTCTACCAGCAGGTGTGCTACTCTCCTTACCA
GCGGTCTTATTACATCACGATGAAGAGATATGGGGTGAAGATGCAAAGAAATTCAATCCA
GAGAGATTTAGAGAAGGTGTCTCAAGTGCAACGAAGGGTCAAGTCACTTTCTTCCCATTT
ACATGGGGTCCTAGAATATGCATTGGACAAAACTTCGCCATGTTAGAAGCAAAGATGGTG
TTGGCTATGATCCTACAACGTTTCTCGTTCGATTTATCTTCATCTTATGCTCATGCTCCT
CATTCCGTTATAACTACGCAACCCCAATATGGTGCTCCACTTATTCTGCACAGACTATAG