Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044567
CDS Infomation

pacid=37431136 polypeptide=PGSC0003DMP400030231 locus=PGSC0003DMG400017300 ID=PGSC0003DMT400044567.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGTCTCTAAAGAAACTCATTTCAGATGATTCTGAAGTTCCATCAGCAAAGACT
TCTGGTACAGAGAGGAATGCTTGGAAAATTCACCTCGGAACAGCTGCACATCATGCATCA
ACTGATGCAAGCTTGTTTTCTAGCTCGCTGCCTGTTCTGCCACATGCAAAATTAAACTTC
GCTGAATCTGAGAACTACAGTCACTCCACTGATGATAGCTCGCCTAGCTTAAACAGACTT
CATTTAGAAGATGAAATTAAAGACCCACTGGAAGTGGAACCAAGTCCAGATGGGTGTTTT
CTCCCTGGGGATGAAGATGAGCTACTAGCAGGCCTAATGGATGATTTTGATCTTAGTGGG
TTGCCAACTCAGCTGGAGGACTTGGAAGATGATTTTTTTGGCAGTGGCGGAGGACTAGAA
TTGGAATCTGACACTCTTGATAATTCACTTAATGGATTTGCAAAATTAAGCATGTCTGAT
GGTATTCTTGGAAGTATTGTTGGACACCATGTCTTCCCAAACAGTGCTGGAATTGTTACG
GGAGAACACCCGTACGGAGAGCATCCTTCTAGGACACTGTTTGTTCGGAATATTAACAGC
AATGTAGAGGACTCCGAGCTGCGATCTCTCTTTGAGCAATATGGTGATATCAGAACTTTG
TACACTTCATGCAAGCATAGGGGCTTTGTGATGATATCTTACTATGATATCCGAGCTGCT
CGAACCGCAATGCGTATGCTGCAACATAAGCCTCTAAGACGGAGAAAGCTAGACATTCAT
TTTTCAATTCCTAAGGAAAATCCATCGGAGAAAGATATTAACCAAGGAACACTCGTCATT
TTCAACTTGGATCCTTCAGTATCCAATGAGGATCTCCTCCAAATATTTGGGGATTATGGG
GAAGTGAAGGAGATAAGGGAGACACCGCATAAGCGCCATCATAAATTCATTGAGTTTTAC
GATGTTAGAGCAGCTGAGGCTGCCCTCAAGGCTTTAAATAGAAGTGACATAGCTGGTAAG
CGGATCAAGCTTGAACCCAGCCGACCCGGTGGAGCCCGTCGAAGCTTGATGCAGCAACTT
AGTCAAGACTATGAACATGAAGAAGTTCGAACATTTAGGCACTCAGTTGGTTCTCCAATC
GCCTCTCCTCCAGGCAGCTGGTCAAACTTTGGCAGTCCTGTTGAGCACAGCTCATTGCTA
GGTTATAATCAATCACCTGATATGACAAATCTCAGCCCTGTAAATGGCAACCATATGCCA
GGGCTGGCTGCTATTCTTCCTGGCCATTTTTCAAGTCCTAAGATTGCACCCATTGGTAAA
GATCCAGGACGATTTGGTTCTCTGAATCATGCAATTACTAGTCCCAAGTCAGTGCAAGGA
ATGGGTTATCAGCAATCTTATTCAGTTCCTGAGCATAAACCACATTTGAACTTTGGATCT
ATGTCGCTTGGTGAGCCTAAGTCATCTGGGATTGGGACACTTTCTGGCCCACAATTTCTA
TGGGGAAGCCCCCCTATTCAGTCAGAGCGTACAGACTCTTCTGTCTGGTCAAATTCATCA
TTGGCACATCCATTTACATCAAATGAGCAAGGGCAAGGCTATCCATATTCCCGTCGACAG
GGCTTGTTCCTCGGATCACATCATGTGGGATCTGCTCCATCAGGAATTCCTCTGGATAGG
CGTTTGGGTTTTTTCTCGGAGTCTCCTGAAACCTCATATATGAACCAAGTTGCATATGGT
AGTACAGGTTCTAGTCATAGTCATGGTATGAGTATAGGTCGCCTTGGGGCAATGAACATG
GCTGGTTCTCTTGCTCGGAACTTTACTGAAGGTGGTTCTCCTATCTCTAGAATGATCCCA
CTGCCTAGGAACGGGCCTATATTTTTCGGAAATGGCTCATACGGAGGAATAGGAATGACT
AACAATGAAGGGATAACTGAACAAGTTCGAAGTCGAAGAGTTGAGAGTGGAAATGAGATA
GACAACAAAAAACAATATCTGCTTGATTTAAAGAAGATCACGAGTGGAGAAGATGCTAGG
ACTACTTTAATGATTAAAAACATCCCAAACAAGTATACCTCAAGGATGCTACTCACAGCA
ATTGACGAGACTCATAAGAATACATATGATTTCCTCTACTTGCCTATTGACTTCAAGAAC
AAATGTAATGTTGGTTATGCCTTCATTAACATGGTGTCTCCTTCACATATCATTTCCTTT
TATGAGGTATTCAATGGGAAGAAGTGGGAAAAGTTCAACAGTGAAAAGGTTGCCTCCTTG
GCTTATGCGCGTATCCAAGGGAAGGTAGCCCTGGTTGCTCATTTCCAGAACTCAAGCCTA
ATGAACGAAGACAAGCGGTGCCGGCCAATTCTTTTCCAGTCAGAAGGTCAAGAAAGAGCT
GACCAGGAACTGTTGCCAACCAACAATCTGAACATTTGTGTTCGTCTGCCTGATGGATCA
TATTCTGGAGATTCTCTGGATAGTCCAAATAGTGATCTAGATGAGAAGCTCTACATGCAC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400030231
PEP Infomation

pacid=37431136 transcript=PGSC0003DMT400044567 locus=PGSC0003DMG400017300 ID=PGSC0003DMT400044567.v4.03 annot-version=v4.03
Sequence

MEKSLKKLISDDSEVPSAKTSGTERNAWKIHLGTAAHHASTDASLFSSSLPVLPHAKLNF
AESENYSHSTDDSSPSLNRLHLEDEIKDPLEVEPSPDGCFLPGDEDELLAGLMDDFDLSG
LPTQLEDLEDDFFGSGGGLELESDTLDNSLNGFAKLSMSDGILGSIVGHHVFPNSAGIVT
GEHPYGEHPSRTLFVRNINSNVEDSELRSLFEQYGDIRTLYTSCKHRGFVMISYYDIRAA
RTAMRMLQHKPLRRRKLDIHFSIPKENPSEKDINQGTLVIFNLDPSVSNEDLLQIFGDYG
EVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSDIAGKRIKLEPSRPGGARRSLMQQL
SQDYEHEEVRTFRHSVGSPIASPPGSWSNFGSPVEHSSLLGYNQSPDMTNLSPVNGNHMP
GLAAILPGHFSSPKIAPIGKDPGRFGSLNHAITSPKSVQGMGYQQSYSVPEHKPHLNFGS
MSLGEPKSSGIGTLSGPQFLWGSPPIQSERTDSSVWSNSSLAHPFTSNEQGQGYPYSRRQ
GLFLGSHHVGSAPSGIPLDRRLGFFSESPETSYMNQVAYGSTGSSHSHGMSIGRLGAMNM
AGSLARNFTEGGSPISRMIPLPRNGPIFFGNGSYGGIGMTNNEGITEQVRSRRVESGNEI
DNKKQYLLDLKKITSGEDARTTLMIKNIPNKYTSRMLLTAIDETHKNTYDFLYLPIDFKN
KCNVGYAFINMVSPSHIISFYEVFNGKKWEKFNSEKVASLAYARIQGKVALVAHFQNSSL
MNEDKRCRPILFQSEGQERADQELLPTNNLNICVRLPDGSYSGDSLDSPNSDLDEKLYMH
*

Transcript Sequence

Transcript ID

PGSC0003DMT400044567
Transcript Infomation

pacid=37431136 locus=PGSC0003DMG400017300 ID=PGSC0003DMT400044567.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGTCTCTAAAGAAACTCATTTCAGATGATTCTGAAGTTCCATCAGCAAAGACT
TCTGGTACAGAGAGGAATGCTTGGAAAATTCACCTCGGAACAGCTGCACATCATGCATCA
ACTGATGCAAGCTTGTTTTCTAGCTCGCTGCCTGTTCTGCCACATGCAAAATTAAACTTC
GCTGAATCTGAGAACTACAGTCACTCCACTGATGATAGCTCGCCTAGCTTAAACAGACTT
CATTTAGAAGATGAAATTAAAGACCCACTGGAAGTGGAACCAAGTCCAGATGGGTGTTTT
CTCCCTGGGGATGAAGATGAGCTACTAGCAGGCCTAATGGATGATTTTGATCTTAGTGGG
TTGCCAACTCAGCTGGAGGACTTGGAAGATGATTTTTTTGGCAGTGGCGGAGGACTAGAA
TTGGAATCTGACACTCTTGATAATTCACTTAATGGATTTGCAAAATTAAGCATGTCTGAT
GGTATTCTTGGAAGTATTGTTGGACACCATGTCTTCCCAAACAGTGCTGGAATTGTTACG
GGAGAACACCCGTACGGAGAGCATCCTTCTAGGACACTGTTTGTTCGGAATATTAACAGC
AATGTAGAGGACTCCGAGCTGCGATCTCTCTTTGAGCAATATGGTGATATCAGAACTTTG
TACACTTCATGCAAGCATAGGGGCTTTGTGATGATATCTTACTATGATATCCGAGCTGCT
CGAACCGCAATGCGTATGCTGCAACATAAGCCTCTAAGACGGAGAAAGCTAGACATTCAT
TTTTCAATTCCTAAGGAAAATCCATCGGAGAAAGATATTAACCAAGGAACACTCGTCATT
TTCAACTTGGATCCTTCAGTATCCAATGAGGATCTCCTCCAAATATTTGGGGATTATGGG
GAAGTGAAGGAGATAAGGGAGACACCGCATAAGCGCCATCATAAATTCATTGAGTTTTAC
GATGTTAGAGCAGCTGAGGCTGCCCTCAAGGCTTTAAATAGAAGTGACATAGCTGGTAAG
CGGATCAAGCTTGAACCCAGCCGACCCGGTGGAGCCCGTCGAAGCTTGATGCAGCAACTT
AGTCAAGACTATGAACATGAAGAAGTTCGAACATTTAGGCACTCAGTTGGTTCTCCAATC
GCCTCTCCTCCAGGCAGCTGGTCAAACTTTGGCAGTCCTGTTGAGCACAGCTCATTGCTA
GGTTATAATCAATCACCTGATATGACAAATCTCAGCCCTGTAAATGGCAACCATATGCCA
GGGCTGGCTGCTATTCTTCCTGGCCATTTTTCAAGTCCTAAGATTGCACCCATTGGTAAA
GATCCAGGACGATTTGGTTCTCTGAATCATGCAATTACTAGTCCCAAGTCAGTGCAAGGA
ATGGGTTATCAGCAATCTTATTCAGTTCCTGAGCATAAACCACATTTGAACTTTGGATCT
ATGTCGCTTGGTGAGCCTAAGTCATCTGGGATTGGGACACTTTCTGGCCCACAATTTCTA
TGGGGAAGCCCCCCTATTCAGTCAGAGCGTACAGACTCTTCTGTCTGGTCAAATTCATCA
TTGGCACATCCATTTACATCAAATGAGCAAGGGCAAGGCTATCCATATTCCCGTCGACAG
GGCTTGTTCCTCGGATCACATCATGTGGGATCTGCTCCATCAGGAATTCCTCTGGATAGG
CGTTTGGGTTTTTTCTCGGAGTCTCCTGAAACCTCATATATGAACCAAGTTGCATATGGT
AGTACAGGTTCTAGTCATAGTCATGGTATGAGTATAGGTCGCCTTGGGGCAATGAACATG
GCTGGTTCTCTTGCTCGGAACTTTACTGAAGGTGGTTCTCCTATCTCTAGAATGATCCCA
CTGCCTAGGAACGGGCCTATATTTTTCGGAAATGGCTCATACGGAGGAATAGGAATGACT
AACAATGAAGGGATAACTGAACAAGTTCGAAGTCGAAGAGTTGAGAGTGGAAATGAGATA
GACAACAAAAAACAATATCTGCTTGATTTAAAGAAGATCACGAGTGGAGAAGATGCTAGG
ACTACTTTAATGATTAAAAACATCCCAAACAAGTATACCTCAAGGATGCTACTCACAGCA
ATTGACGAGACTCATAAGAATACATATGATTTCCTCTACTTGCCTATTGACTTCAAGAAC
AAATGTAATGTTGGTTATGCCTTCATTAACATGGTGTCTCCTTCACATATCATTTCCTTT
TATGAGGTATTCAATGGGAAGAAGTGGGAAAAGTTCAACAGTGAAAAGGTTGCCTCCTTG
GCTTATGCGCGTATCCAAGGGAAGGTAGCCCTGGTTGCTCATTTCCAGAACTCAAGCCTA
ATGAACGAAGACAAGCGGTGCCGGCCAATTCTTTTCCAGTCAGAAGGTCAAGAAAGAGCT
GACCAGGAACTGTTGCCAACCAACAATCTGAACATTTGTGTTCGTCTGCCTGATGGATCA
TATTCTGGAGATTCTCTGGATAGTCCAAATAGTGATCTAGATGAGAAGCTCTACATGCAC
TGA