Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044551
CDS Infomation

pacid=37432748 polypeptide=PGSC0003DMP400030217 locus=PGSC0003DMG400017294 ID=PGSC0003DMT400044551.v4.03 annot-version=v4.03
Sequence

ATGCCGGCGGTGTCGATAGATGGTTTCTCCATCAGGGAGTATACTGCGAAGATGAGGAGT
GTGGACGTGGTGAAATGCTGGCCGTTCGATGAATCAACGAAGGAAGATCATGTGAGAGCT
ATGTTACCTCCAATTACAGTGAAGAAATTCAGCTGGTGGTTAGATGTACTGGAATCTGAG
GATTCTGATGATGTTGTACCAGTCAGGAGAAATGGAACGGGTAGGAAAGTTAAGTGTGTT
AAGGGAAAAACAAGGGTTCAGAAGAAGAGGTCTATTGTTGACATTTTCGCTGTGGCGCCG
CAAGTTGAGAGAACTGACGGTGATGATGATTATTACGATGATGAGGAGGATGAGGATGAA
GAAGACGATGATAATTGCGCTGTTGTTAATGAAGGGAAAAAGGAATTTTCTGATAGAAAT
GGTAATGCAATTAGAATTCGTAAAAGCAAGAGGAGAATCACTATGAAGAAGAAGAAAACG
ATTGCGAGCAAGTTGAAGGAGGTGAAGAAAACGATGAAGAAGGATAGGAGGTTTAAGCAA
AGGAAGAATGTGAATAGTAGATACCTGGATCTACTAATCCGAAAGAAGGAGAGATTTGAC
AAGCTCAAAGTGCCCAATTCATTTTCAAAACCAAGTTGTTCACAGCATAGAAAGATGTGT
GAGAAGGACATGGAAGATATTAGTCCTACCTACGGGAAGAAACCACAACGGAAACATCTC
GTTTCAGAAAAGAAGCCCAAAGGTCTTACTGATTCCAAGTTCTCAGCGGATGATCAAAGG
ATGATGAATTCAGTTTGTAGCAACCTCAAGAAAAGGACTAAACAATTTCCAGTGGAGAAC
TCGTCAGGTGGGATTTTATCTGGTCCTAATGAGGCAAATTTTTGCAGCAATCAACAAGGC
GACAGACATGTTATCTCAGACGATGCCACAGAGAGAGGAGAGGTTCTATCCCTTGTGGAA
GAGAAAGGAATAAATAAACATATTTTGAGAACTACAGAAAGTGAGCTTACTGTTCAACCA
GGATCCCCAAAGAGGTCCGCCGTGCAAAGTACCGCTGATGCTCCTGGTTTACTTAGGCAC
AATATCGGTACTAAAGATAATTCATCTGAATGCAGTGATGTTTTTAATCAAGTCTCTGAG
GGAAATGACAATTTAAAATTATTCGGAAGAGGTTCTGGAGTGGCATCACACAGTTCACAG
TATTTCTGCAATCCTGGGTCTCTCCATGTGTCTCAACAGATGTATAACCACCAAAAGAAT
GACCAAATAGTTGGAAGTCTAATTAACGCTTGTGGTGCTAGTGAGAGATCACATGACAAG
TTAAGAGGTTCTCCCCCTGAAGTTACTGGAGTTTGCTCTGTGCATTCTGTGAAGGCATAT
CCTCAACATTCAGCAGCTTATGAAAATGTGAACAGGAAGCCAATTTCGCTGCCAGAAACC
ATCGTGGGAAATTGCAGTGGTCATTTCATGCAATATCAGCCACTCCCTCAAATCTGCCAT
CAGGAATTAATGTGCAAAATTTGTTCTTTCCCTGAGTGGAAGCAAAGAGAATCCATGCAT
GGAGAGAAGGGAATTGAAAAGGACTATGTTCGTTTGCCCCTCAACTCTCAAGGGGAATTA
ATCGATCTGAACTCAAATAGTAAAGGAAAGTTGACTCAGCTGCCAAGCTCAAGGAGAATT
GCGGGATCTTCCGGAGGATTAGCTGTAAGCAACGTTTCACACTCAAACATGGACAATATC
TCTGATGCTAGAGGTTGGGATAAACGAGCACCATCCACAGACCAGCTAAAAAGGTCCTCT
GCAGATGATTCAATGGAATGGAGCCCTACTTTTCCAGTACCTTCAAGGTTAGGTATCTAT
GAGTATGACGCTGGAAGAACAAATGTTGAGTTGGATCCGCTAAAGCAAAATAAGGAATCT
ATTACTCCTTTTGAGTTAGATTGCAGTGTCAGTAATTTGTCCAACCATAGAAGCAAGCTC
AACGATCAGGCCAAGCAACTTGAAACGAGCAGGAGTAAGCAATATGGGAATTCTGATGAT
GTCTCACTGGTTGTTACTCCATCGAAAATGCGTCTGATGGGAAAAGAGTTTACGGTTGAT
AGAAGAGATTTTCATGCACCACTGGATAAAAGGATTTGGACAGATAAGCAGATCATTGCT
GAGAAATTTTCGGCAGAGACTTACAACTACAGTTCAGTGGTTACAAATCATGATCAACAA
AATCTCACCGTGCATCCTGTGCTGGGAACACTGAAAGGCATGGTTGCTTGCTCTCCTAGT
ATCCAAATCAATCAGGCCATTCCAAGGCCTCAAGTTTGTCCTCCTCACTTCAGTCGCCAA
ATTGATTCGGTGCAGCAAAATTGTTTAGGTGCAATCAAACAAATCCCTTTCTCCCTTTAT
AATCAAAAACCAAACTTTGAGGAGCCTTTTCCAGGTGGATATAAATCTTTCACAATCAGC
CCATATGGACCTGTACCAACATTAATGCATCATTACTCCAGTCAGAGTGGGGGCTCGAGC
TCTCTTGATCTGAACAGCACAAGCTGTGCCATCAATTTTCCTTATTTGCGTCCAGATTCC
GGAAGGAACTTCCGACCATCCTGGTCTCAGTTCTCTACAGAAAGCACCCCATGGTTTTCA
GATGCAAAACAAAAGAAACTATTAATGGATTTTCATGAATTATATTCTACATCTGACAGG
AAAAATTATTACTGCAGCAGCATTGCTGGGGATAGCCGTCAAATTGACCCTTCGGTATAT
CTTGCATCAGAGCGCTTCTGTTCTTTCACTCAGCGCCCTCAACATGCATTGGAGAATCCG
GTCTCTCCACCATCTTTAGCTAACTATTCCCCTATGCCACTCCAAATAGGTTCCGGAGTA
AATACTGGCACATACAAAAGACATGGTGACGTGACCAAAATCACATCTACTCCTTGTCTT
AGAGACCTTGGTGACAGCAGAAAGAGCAAAAAGAGGCCATTATCTACATCAGACAATCGT
ACAAATGTGGCGGAGATCCCTAACTTTTGGTTTCGAGAAGATCCTTATGTTGTTTCAGCA
CCATTAAAAAGCTACTCTAATTTTGAAGGTCAATACAGCTGCAGAAAAGGAATTGAATCA
GGTTCAGTTAAAGGCATGTCAAACAGTATTGAGAGTGGCCAAAGTGGAACAACAGAGGCA
CGCCTGGGATCTTTCAAAGATGAAGATACTCTCAAATTTGAATGTACTCTGGGATCTGGG
CCCATTAAATTAACAGCTGGAGCAAAGCATGTGCTTAAGCCCTGCCTGTATAATGATCAG
ACGAACTTCAGTCCAGCTCATTCAACTATCCAATTCGACGCTTCTGCTGCTGGTAGCACA
ACTCAGGAAACTGAGCAATCAACCAAGACATACAAGTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030217
PEP Infomation

pacid=37432748 transcript=PGSC0003DMT400044551 locus=PGSC0003DMG400017294 ID=PGSC0003DMT400044551.v4.03 annot-version=v4.03
Sequence

MPAVSIDGFSIREYTAKMRSVDVVKCWPFDESTKEDHVRAMLPPITVKKFSWWLDVLESE
DSDDVVPVRRNGTGRKVKCVKGKTRVQKKRSIVDIFAVAPQVERTDGDDDYYDDEEDEDE
EDDDNCAVVNEGKKEFSDRNGNAIRIRKSKRRITMKKKKTIASKLKEVKKTMKKDRRFKQ
RKNVNSRYLDLLIRKKERFDKLKVPNSFSKPSCSQHRKMCEKDMEDISPTYGKKPQRKHL
VSEKKPKGLTDSKFSADDQRMMNSVCSNLKKRTKQFPVENSSGGILSGPNEANFCSNQQG
DRHVISDDATERGEVLSLVEEKGINKHILRTTESELTVQPGSPKRSAVQSTADAPGLLRH
NIGTKDNSSECSDVFNQVSEGNDNLKLFGRGSGVASHSSQYFCNPGSLHVSQQMYNHQKN
DQIVGSLINACGASERSHDKLRGSPPEVTGVCSVHSVKAYPQHSAAYENVNRKPISLPET
IVGNCSGHFMQYQPLPQICHQELMCKICSFPEWKQRESMHGEKGIEKDYVRLPLNSQGEL
IDLNSNSKGKLTQLPSSRRIAGSSGGLAVSNVSHSNMDNISDARGWDKRAPSTDQLKRSS
ADDSMEWSPTFPVPSRLGIYEYDAGRTNVELDPLKQNKESITPFELDCSVSNLSNHRSKL
NDQAKQLETSRSKQYGNSDDVSLVVTPSKMRLMGKEFTVDRRDFHAPLDKRIWTDKQIIA
EKFSAETYNYSSVVTNHDQQNLTVHPVLGTLKGMVACSPSIQINQAIPRPQVCPPHFSRQ
IDSVQQNCLGAIKQIPFSLYNQKPNFEEPFPGGYKSFTISPYGPVPTLMHHYSSQSGGSS
SLDLNSTSCAINFPYLRPDSGRNFRPSWSQFSTESTPWFSDAKQKKLLMDFHELYSTSDR
KNYYCSSIAGDSRQIDPSVYLASERFCSFTQRPQHALENPVSPPSLANYSPMPLQIGSGV
NTGTYKRHGDVTKITSTPCLRDLGDSRKSKKRPLSTSDNRTNVAEIPNFWFREDPYVVSA
PLKSYSNFEGQYSCRKGIESGSVKGMSNSIESGQSGTTEARLGSFKDEDTLKFECTLGSG
PIKLTAGAKHVLKPCLYNDQTNFSPAHSTIQFDASAAGSTTQETEQSTKTYKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400044551
Transcript Infomation

pacid=37432748 locus=PGSC0003DMG400017294 ID=PGSC0003DMT400044551.v4.03 annot-version=v4.03
Sequence

ATGCCGGCGGTGTCGATAGATGGTTTCTCCATCAGGGAGTATACTGCGAAGATGAGGAGT
GTGGACGTGGTGAAATGCTGGCCGTTCGATGAATCAACGAAGGAAGATCATGTGAGAGCT
ATGTTACCTCCAATTACAGTGAAGAAATTCAGCTGGTGGTTAGATGTACTGGAATCTGAG
GATTCTGATGATGTTGTACCAGTCAGGAGAAATGGAACGGGTAGGAAAGTTAAGTGTGTT
AAGGGAAAAACAAGGGTTCAGAAGAAGAGGTCTATTGTTGACATTTTCGCTGTGGCGCCG
CAAGTTGAGAGAACTGACGGTGATGATGATTATTACGATGATGAGGAGGATGAGGATGAA
GAAGACGATGATAATTGCGCTGTTGTTAATGAAGGGAAAAAGGAATTTTCTGATAGAAAT
GGTAATGCAATTAGAATTCGTAAAAGCAAGAGGAGAATCACTATGAAGAAGAAGAAAACG
ATTGCGAGCAAGTTGAAGGAGGTGAAGAAAACGATGAAGAAGGATAGGAGGTTTAAGCAA
AGGAAGAATGTGAATAGTAGATACCTGGATCTACTAATCCGAAAGAAGGAGAGATTTGAC
AAGCTCAAAGTGCCCAATTCATTTTCAAAACCAAGTTGTTCACAGCATAGAAAGATGTGT
GAGAAGGACATGGAAGATATTAGTCCTACCTACGGGAAGAAACCACAACGGAAACATCTC
GTTTCAGAAAAGAAGCCCAAAGGTCTTACTGATTCCAAGTTCTCAGCGGATGATCAAAGG
ATGATGAATTCAGTTTGTAGCAACCTCAAGAAAAGGACTAAACAATTTCCAGTGGAGAAC
TCGTCAGGTGGGATTTTATCTGGTCCTAATGAGGCAAATTTTTGCAGCAATCAACAAGGC
GACAGACATGTTATCTCAGACGATGCCACAGAGAGAGGAGAGGTTCTATCCCTTGTGGAA
GAGAAAGGAATAAATAAACATATTTTGAGAACTACAGAAAGTGAGCTTACTGTTCAACCA
GGATCCCCAAAGAGGTCCGCCGTGCAAAGTACCGCTGATGCTCCTGGTTTACTTAGGCAC
AATATCGGTACTAAAGATAATTCATCTGAATGCAGTGATGTTTTTAATCAAGTCTCTGAG
GGAAATGACAATTTAAAATTATTCGGAAGAGGTTCTGGAGTGGCATCACACAGTTCACAG
TATTTCTGCAATCCTGGGTCTCTCCATGTGTCTCAACAGATGTATAACCACCAAAAGAAT
GACCAAATAGTTGGAAGTCTAATTAACGCTTGTGGTGCTAGTGAGAGATCACATGACAAG
TTAAGAGGTTCTCCCCCTGAAGTTACTGGAGTTTGCTCTGTGCATTCTGTGAAGGCATAT
CCTCAACATTCAGCAGCTTATGAAAATGTGAACAGGAAGCCAATTTCGCTGCCAGAAACC
ATCGTGGGAAATTGCAGTGGTCATTTCATGCAATATCAGCCACTCCCTCAAATCTGCCAT
CAGGAATTAATGTGCAAAATTTGTTCTTTCCCTGAGTGGAAGCAAAGAGAATCCATGCAT
GGAGAGAAGGGAATTGAAAAGGACTATGTTCGTTTGCCCCTCAACTCTCAAGGGGAATTA
ATCGATCTGAACTCAAATAGTAAAGGAAAGTTGACTCAGCTGCCAAGCTCAAGGAGAATT
GCGGGATCTTCCGGAGGATTAGCTGTAAGCAACGTTTCACACTCAAACATGGACAATATC
TCTGATGCTAGAGGTTGGGATAAACGAGCACCATCCACAGACCAGCTAAAAAGGTCCTCT
GCAGATGATTCAATGGAATGGAGCCCTACTTTTCCAGTACCTTCAAGGTTAGGTATCTAT
GAGTATGACGCTGGAAGAACAAATGTTGAGTTGGATCCGCTAAAGCAAAATAAGGAATCT
ATTACTCCTTTTGAGTTAGATTGCAGTGTCAGTAATTTGTCCAACCATAGAAGCAAGCTC
AACGATCAGGCCAAGCAACTTGAAACGAGCAGGAGTAAGCAATATGGGAATTCTGATGAT
GTCTCACTGGTTGTTACTCCATCGAAAATGCGTCTGATGGGAAAAGAGTTTACGGTTGAT
AGAAGAGATTTTCATGCACCACTGGATAAAAGGATTTGGACAGATAAGCAGATCATTGCT
GAGAAATTTTCGGCAGAGACTTACAACTACAGTTCAGTGGTTACAAATCATGATCAACAA
AATCTCACCGTGCATCCTGTGCTGGGAACACTGAAAGGCATGGTTGCTTGCTCTCCTAGT
ATCCAAATCAATCAGGCCATTCCAAGGCCTCAAGTTTGTCCTCCTCACTTCAGTCGCCAA
ATTGATTCGGTGCAGCAAAATTGTTTAGGTGCAATCAAACAAATCCCTTTCTCCCTTTAT
AATCAAAAACCAAACTTTGAGGAGCCTTTTCCAGGTGGATATAAATCTTTCACAATCAGC
CCATATGGACCTGTACCAACATTAATGCATCATTACTCCAGTCAGAGTGGGGGCTCGAGC
TCTCTTGATCTGAACAGCACAAGCTGTGCCATCAATTTTCCTTATTTGCGTCCAGATTCC
GGAAGGAACTTCCGACCATCCTGGTCTCAGTTCTCTACAGAAAGCACCCCATGGTTTTCA
GATGCAAAACAAAAGAAACTATTAATGGATTTTCATGAATTATATTCTACATCTGACAGG
AAAAATTATTACTGCAGCAGCATTGCTGGGGATAGCCGTCAAATTGACCCTTCGGTATAT
CTTGCATCAGAGCGCTTCTGTTCTTTCACTCAGCGCCCTCAACATGCATTGGAGAATCCG
GTCTCTCCACCATCTTTAGCTAACTATTCCCCTATGCCACTCCAAATAGGTTCCGGAGTA
AATACTGGCACATACAAAAGACATGGTGACGTGACCAAAATCACATCTACTCCTTGTCTT
AGAGACCTTGGTGACAGCAGAAAGAGCAAAAAGAGGCCATTATCTACATCAGACAATCGT
ACAAATGTGGCGGAGATCCCTAACTTTTGGTTTCGAGAAGATCCTTATGTTGTTTCAGCA
CCATTAAAAAGCTACTCTAATTTTGAAGGTCAATACAGCTGCAGAAAAGGAATTGAATCA
GGTTCAGTTAAAGGCATGTCAAACAGTATTGAGAGTGGCCAAAGTGGAACAACAGAGGCA
CGCCTGGGATCTTTCAAAGATGAAGATACTCTCAAATTTGAATGTACTCTGGGATCTGGG
CCCATTAAATTAACAGCTGGAGCAAAGCATGTGCTTAAGCCCTGCCTGTATAATGATCAG
ACGAACTTCAGTCCAGCTCATTCAACTATCCAATTCGACGCTTCTGCTGCTGGTAGCACA
ACTCAGGAAACTGAGCAATCAACCAAGACATACAAGTTCTAG