Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044535
CDS Infomation

pacid=37433616 polypeptide=PGSC0003DMP400030204 locus=PGSC0003DMG400017291 ID=PGSC0003DMT400044535.v4.03 annot-version=v4.03
Sequence

ATGAGCATAATGAAGATTTTGTTTCTTCAATCTCTGTTATTTTCTCTTTTTCTTGTTTTC
TTCACAGTTTTAGCAGCAACTTCAAAATCTAAGCTCCCACAAGAAGAAGTGATAGCATTG
AAAGTGATTGCAAAAAAGTTTGGGAAAAAAGATTGGGATTTTAACAAAGATCCTTGTAGT
GGAGAAGGAAATTGGAGTACTGCTATTACTGTTAAAGGATTTGAGAGCTATGTTGCTTGT
GATTGCTCTTTTAACAACAATTCCACCTGCCATATCACCTCCATAGCTTTGAAAGCACAG
AATATTTCAGCAAATATTCCACCAGAATTCGCGCAACTTCGCCATCTTAAGCACTTGGAC
CTCAGTCGCAATTATCTCAATGGTTCAATCCCATTTCAATGGGCGTCACTGCGCTTGCTT
GACCTTTCTTTCATGGGAAACCACTTGTCTGGTCCATTTCCAAAAGTTCTCACCAGAATT
ACGACGCTTAGGAACCTGAGCATTGAAGGAAATAAATTTTCAGGAACAATACCTCCAGAA
ATCGGCAACTTGGTTCATATGGAAAAACTCGTGCTATCGTCAAATAAATTAACCGGAGCT
TTGCCAGCCACACTAGCCAAGCTAACCAACTTAACTGATATGAGGATAAACGACAACAAT
TTTACTGGAAAGATACCAAAATTTATCAGCAGCTGGACAAAAATTGAGAAACTGCATATA
CAAGGCTGTTCTCTTGAGGGTCCCATTCCTTCCTCTATATCTTTCCTGACAAGTTTAATT
GATTTAAGGATCAGTGATCTAAAAAGTGGAAAATCTGGTTTTCCACCATTAGATAACCTA
GAATCCATAAAAATACTAGTACTAAGAAATTGCTTAATTCATGGAGAAATGCCTGAATAT
ATTGGGGAAATGAAGAAATTGAAGACACTGGACCTTAGTTTTAACAGCCTGTCTGGTGAG
ATTCCATCAACTTTTGTACACCTATCCAAAGTAGATTTTATATATTTGACAGCGAACAAA
CTTACTGGACTTGTTCCTGGATGGATTTTAACCAGAAACAAGAACATAGATGTTTCAACT
AACAATTTTACATGGGAAACCTCACCTTTTGAATGTCCCCGTGGAAATCAAAACTTGGTG
GAGAGCTATTCTGCATTGGGACAAGAATCAAACAAAATTCATCCTTGCCTGAAGCAGAAT
TTCCCTTGTTCTGAGCCAATAGATCAGCAACAATATTCTATCCACATTAATTGTGGAGGC
AAAGAGGTAACCATCAAGAATGGTACAAAATACACAAACTATGAAGCTGATTTAGAACCC
AGAGGTGCTTCTATGTACTATTCAAGACATAACTGGGCGTTTAGCAGCACAGGAAATTTT
ATGGACAACGACGTTGAGTCTGATGTCTATATCAATACCAATGTCTCTGCCCTGCAAAAT
GTCAAGGCCCCTGAACTTGAACTATACACTACTGCACGTATATCTCCTCTCTCCCTCACA
TATTATGGACAATGTCTAATGAATGGAAACTACACTGTCAAGCTCCATTTTGCGGAGATA
ATATTCACAAATGATACTTCATTCAACAGCCTTGGAGAGCGTATATTTGATGTCTACTTG
CAGGAAAAGCTGGTGTTGAAGGATTTTAACATTGCAAAAGAGGCTGGTGGGCCTGGTAAG
CCCATTGTGAAGACGTTCACTGTGAATGTGACAAGCCACACGCTGAAGATACATTTTTAC
TGGGCAGGAAGGGGGACTACAGGAATTCCATTTAGAGGGGTTTATGGTCCTCTAATTTCA
GCTATATCAGTTGTTAATAAGTTTCCCCCTCCTCTGCCTGCTCGTCTGCCTGCTCATCTG
CCTGCAGATCAAAAGAGTAAAATTAATGTTGGCATACTAGCCGGCATAATAGCTGGATCA
GTATTTCTTGTCCTTCTGATTATTGGTATCTTGTACAAGGGAGGCTGTCTAGGCGAAAAT
GTATCTACTGATAGAGAACTTAAAGGACTGGATCTACAAGCTGGACTATTTACTCTCAGA
CAGATCAAAGCCGCGACAAAGAATTTTGACCCAGCAAACAAGATAGGGGAAGGTGGTTTT
GGTTCAGTTTATAAGGGTCTATTATCTGATGGAACAGTAATTGCGGTGAAGCAACTTTCT
GCAAAGTCAAAACAAGGAACTCGAGAATTTTTGAATGAAATAGGGATGATCTCTGCTGTA
CAACATCCAAATCTTGTAAAGCTTTATGGATGTTGCATTCAAGGAAACCAATTATTGCTA
GTCTATGAGTACATGGAAAATAACTGTGTATCTCGTGTTCTTTTTGGCAAAGGTCCAATT
GGCAAAATGAAATTAGACTGGTCTACTCGGAAAAAAATTTGCCTAGGAATTGCAAGAGGT
TTAGCATATCTCCATGAGGAGTCGAGCCTGAAGATAGTCCACAGAGACATCAAGACCAGT
AATATTTTGCTTGACAAGGACTTCAATCCAAAAATATCTGATTTTGGCTTGGCAAAACTA
CATGAGGATGATACTACCCACATTAGTACCAGGATTGCAGGAACTGTGGGTTACATGGCT
CCAGAATATGCGATGCGAGGCTACTTAACTAGCAAAGCAGATATTTACAGCTATGGAGTT
GTTGCATTGGAGATTATTAGTGGGAAAAGCAATACAAATTATAGGCCAACGGAAGATTGT
GTTTATCTTCTTGACTGGGCTTATGTTTTGCAAGAGCGCGGGAGTATATTGGAATTGGTT
GATCCAGACTTGGGTTCTGACTACTCGTCACAAGAAGCAATTGTGTTACTGAATGTTGCC
CTTTTATGCACTAATGCAGCTCCAACACTTAGACCAATAATGTCTCAAGTGGTAAGCATG
CTCCAAGGCCAAACTCTTGTTCAGGATGTCCTTTCTGATCCAGGGATGTCAACAAGCGGT
TCAGGATTCAGATCAACGAGAAGTCACTTCTGGCAAACTCAAAGCCTAACTGATGGTACG
CTTACTGATTCCACTCTCTCAACTGGAAATGCGGAAGAAATTGGCATTCTTCAAAGAGTA
GAGCCTAATGTATCTAACAGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030204
PEP Infomation

pacid=37433616 transcript=PGSC0003DMT400044535 locus=PGSC0003DMG400017291 ID=PGSC0003DMT400044535.v4.03 annot-version=v4.03
Sequence

MSIMKILFLQSLLFSLFLVFFTVLAATSKSKLPQEEVIALKVIAKKFGKKDWDFNKDPCS
GEGNWSTAITVKGFESYVACDCSFNNNSTCHITSIALKAQNISANIPPEFAQLRHLKHLD
LSRNYLNGSIPFQWASLRLLDLSFMGNHLSGPFPKVLTRITTLRNLSIEGNKFSGTIPPE
IGNLVHMEKLVLSSNKLTGALPATLAKLTNLTDMRINDNNFTGKIPKFISSWTKIEKLHI
QGCSLEGPIPSSISFLTSLIDLRISDLKSGKSGFPPLDNLESIKILVLRNCLIHGEMPEY
IGEMKKLKTLDLSFNSLSGEIPSTFVHLSKVDFIYLTANKLTGLVPGWILTRNKNIDVST
NNFTWETSPFECPRGNQNLVESYSALGQESNKIHPCLKQNFPCSEPIDQQQYSIHINCGG
KEVTIKNGTKYTNYEADLEPRGASMYYSRHNWAFSSTGNFMDNDVESDVYINTNVSALQN
VKAPELELYTTARISPLSLTYYGQCLMNGNYTVKLHFAEIIFTNDTSFNSLGERIFDVYL
QEKLVLKDFNIAKEAGGPGKPIVKTFTVNVTSHTLKIHFYWAGRGTTGIPFRGVYGPLIS
AISVVNKFPPPLPARLPAHLPADQKSKINVGILAGIIAGSVFLVLLIIGILYKGGCLGEN
VSTDRELKGLDLQAGLFTLRQIKAATKNFDPANKIGEGGFGSVYKGLLSDGTVIAVKQLS
AKSKQGTREFLNEIGMISAVQHPNLVKLYGCCIQGNQLLLVYEYMENNCVSRVLFGKGPI
GKMKLDWSTRKKICLGIARGLAYLHEESSLKIVHRDIKTSNILLDKDFNPKISDFGLAKL
HEDDTTHISTRIAGTVGYMAPEYAMRGYLTSKADIYSYGVVALEIISGKSNTNYRPTEDC
VYLLDWAYVLQERGSILELVDPDLGSDYSSQEAIVLLNVALLCTNAAPTLRPIMSQVVSM
LQGQTLVQDVLSDPGMSTSGSGFRSTRSHFWQTQSLTDGTLTDSTLSTGNAEEIGILQRV
EPNVSNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400044535
Transcript Infomation

pacid=37433616 locus=PGSC0003DMG400017291 ID=PGSC0003DMT400044535.v4.03 annot-version=v4.03
Sequence

ATGAGCATAATGAAGATTTTGTTTCTTCAATCTCTGTTATTTTCTCTTTTTCTTGTTTTC
TTCACAGTTTTAGCAGCAACTTCAAAATCTAAGCTCCCACAAGAAGAAGTGATAGCATTG
AAAGTGATTGCAAAAAAGTTTGGGAAAAAAGATTGGGATTTTAACAAAGATCCTTGTAGT
GGAGAAGGAAATTGGAGTACTGCTATTACTGTTAAAGGATTTGAGAGCTATGTTGCTTGT
GATTGCTCTTTTAACAACAATTCCACCTGCCATATCACCTCCATAGCTTTGAAAGCACAG
AATATTTCAGCAAATATTCCACCAGAATTCGCGCAACTTCGCCATCTTAAGCACTTGGAC
CTCAGTCGCAATTATCTCAATGGTTCAATCCCATTTCAATGGGCGTCACTGCGCTTGCTT
GACCTTTCTTTCATGGGAAACCACTTGTCTGGTCCATTTCCAAAAGTTCTCACCAGAATT
ACGACGCTTAGGAACCTGAGCATTGAAGGAAATAAATTTTCAGGAACAATACCTCCAGAA
ATCGGCAACTTGGTTCATATGGAAAAACTCGTGCTATCGTCAAATAAATTAACCGGAGCT
TTGCCAGCCACACTAGCCAAGCTAACCAACTTAACTGATATGAGGATAAACGACAACAAT
TTTACTGGAAAGATACCAAAATTTATCAGCAGCTGGACAAAAATTGAGAAACTGCATATA
CAAGGCTGTTCTCTTGAGGGTCCCATTCCTTCCTCTATATCTTTCCTGACAAGTTTAATT
GATTTAAGGATCAGTGATCTAAAAAGTGGAAAATCTGGTTTTCCACCATTAGATAACCTA
GAATCCATAAAAATACTAGTACTAAGAAATTGCTTAATTCATGGAGAAATGCCTGAATAT
ATTGGGGAAATGAAGAAATTGAAGACACTGGACCTTAGTTTTAACAGCCTGTCTGGTGAG
ATTCCATCAACTTTTGTACACCTATCCAAAGTAGATTTTATATATTTGACAGCGAACAAA
CTTACTGGACTTGTTCCTGGATGGATTTTAACCAGAAACAAGAACATAGATGTTTCAACT
AACAATTTTACATGGGAAACCTCACCTTTTGAATGTCCCCGTGGAAATCAAAACTTGGTG
GAGAGCTATTCTGCATTGGGACAAGAATCAAACAAAATTCATCCTTGCCTGAAGCAGAAT
TTCCCTTGTTCTGAGCCAATAGATCAGCAACAATATTCTATCCACATTAATTGTGGAGGC
AAAGAGGTAACCATCAAGAATGGTACAAAATACACAAACTATGAAGCTGATTTAGAACCC
AGAGGTGCTTCTATGTACTATTCAAGACATAACTGGGCGTTTAGCAGCACAGGAAATTTT
ATGGACAACGACGTTGAGTCTGATGTCTATATCAATACCAATGTCTCTGCCCTGCAAAAT
GTCAAGGCCCCTGAACTTGAACTATACACTACTGCACGTATATCTCCTCTCTCCCTCACA
TATTATGGACAATGTCTAATGAATGGAAACTACACTGTCAAGCTCCATTTTGCGGAGATA
ATATTCACAAATGATACTTCATTCAACAGCCTTGGAGAGCGTATATTTGATGTCTACTTG
CAGGAAAAGCTGGTGTTGAAGGATTTTAACATTGCAAAAGAGGCTGGTGGGCCTGGTAAG
CCCATTGTGAAGACGTTCACTGTGAATGTGACAAGCCACACGCTGAAGATACATTTTTAC
TGGGCAGGAAGGGGGACTACAGGAATTCCATTTAGAGGGGTTTATGGTCCTCTAATTTCA
GCTATATCAGTTGTTAATAAGTTTCCCCCTCCTCTGCCTGCTCGTCTGCCTGCTCATCTG
CCTGCAGATCAAAAGAGTAAAATTAATGTTGGCATACTAGCCGGCATAATAGCTGGATCA
GTATTTCTTGTCCTTCTGATTATTGGTATCTTGTACAAGGGAGGCTGTCTAGGCGAAAAT
GTATCTACTGATAGAGAACTTAAAGGACTGGATCTACAAGCTGGACTATTTACTCTCAGA
CAGATCAAAGCCGCGACAAAGAATTTTGACCCAGCAAACAAGATAGGGGAAGGTGGTTTT
GGTTCAGTTTATAAGGGTCTATTATCTGATGGAACAGTAATTGCGGTGAAGCAACTTTCT
GCAAAGTCAAAACAAGGAACTCGAGAATTTTTGAATGAAATAGGGATGATCTCTGCTGTA
CAACATCCAAATCTTGTAAAGCTTTATGGATGTTGCATTCAAGGAAACCAATTATTGCTA
GTCTATGAGTACATGGAAAATAACTGTGTATCTCGTGTTCTTTTTGGCAAAGGTCCAATT
GGCAAAATGAAATTAGACTGGTCTACTCGGAAAAAAATTTGCCTAGGAATTGCAAGAGGT
TTAGCATATCTCCATGAGGAGTCGAGCCTGAAGATAGTCCACAGAGACATCAAGACCAGT
AATATTTTGCTTGACAAGGACTTCAATCCAAAAATATCTGATTTTGGCTTGGCAAAACTA
CATGAGGATGATACTACCCACATTAGTACCAGGATTGCAGGAACTGTGGGTTACATGGCT
CCAGAATATGCGATGCGAGGCTACTTAACTAGCAAAGCAGATATTTACAGCTATGGAGTT
GTTGCATTGGAGATTATTAGTGGGAAAAGCAATACAAATTATAGGCCAACGGAAGATTGT
GTTTATCTTCTTGACTGGGCTTATGTTTTGCAAGAGCGCGGGAGTATATTGGAATTGGTT
GATCCAGACTTGGGTTCTGACTACTCGTCACAAGAAGCAATTGTGTTACTGAATGTTGCC
CTTTTATGCACTAATGCAGCTCCAACACTTAGACCAATAATGTCTCAAGTGGTAAGCATG
CTCCAAGGCCAAACTCTTGTTCAGGATGTCCTTTCTGATCCAGGGATGTCAACAAGCGGT
TCAGGATTCAGATCAACGAGAAGTCACTTCTGGCAAACTCAAAGCCTAACTGATGGTACG
CTTACTGATTCCACTCTCTCAACTGGAAATGCGGAAGAAATTGGCATTCTTCAAAGAGTA
GAGCCTAATGTATCTAACAGTTAA