Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044455
CDS Infomation

pacid=37454747 polypeptide=PGSC0003DMP400030157 locus=PGSC0003DMG400017254 ID=PGSC0003DMT400044455.v4.03 annot-version=v4.03
Sequence

ATGGTGGCTGAGCCTTGGTGTTTGAGGATGGGTAGTCAGGTAAGTACTAATGTCAAGAAA
CACTCTTTACTTATTGAAAATTCAAAGAAATTATCTATGAAGAAACAAACTCAACAAGAG
AAGTTGTTTATAGGGATATTGTCATTTGAAGTTGCTAATATGATGTCTAAGATTATTCAT
CTTCATAAATCTTTGACTGATTCTGAGATTCTTAAGCTTAAAAATGAGATCTTTAAGTCT
GTAGGAATAAAGGCTTTAGTTTCTGATGATGAAGATAAGCTTCTTGAATTAGTACTTGTT
GAAAAACTTGATGATTTGAATAGGGTTGCTAGTGTAGTATCTAGGCTTGGGAAAAAATGT
ACAATTTCTGCCTTACAAGGGTTTCAGCATGTTTATGGTGATGTTATTTCTGGGGTTATT
GATGTGAAGGATTTGGGATTTTTGGTTAAAGATATGGAGGGGATGGTTAGGAAAATGGAG
AGGTATGTGAATTCTACTGCTAGTTTGTATTGTGAGATGGCTGTTTTGAATGAATTGGAA
GTGGCAACAAAGAAATTTCAGCAGAATCAGCATGAGGAAAGTAGAAAGGCATTTGAGCAG
AAACTTGCTTGGCAGAAACAAGATGTGAGGCATTTAGAAGATGTTTCACTTTGGAATCAG
ACTTATGATAAAGTTGTTGAACTGTTGGCTAGGACTGTGTGTACTGTATATGCTCGGATC
AGTACGGTGTTTGGCAATAATGTTCTCGTAAAGAGGGATCTTTTAGGTAATCGAGGATTC
AATGAGAAGTCTGGTGTAATTGTGGCAGATAGCAAGTCTGAAGTTATGGATGCTGATTTC
AAGAAACCTGTTTTGAGGAACAACAATGGAAGCTATCGATCGGGGTCAATTGAGAGAGGG
GCGTCGGGGAAAAGGAGCATGAACCATAGTACTCAAACTAAGGTTGGAAGAAATGAAGGG
AGCTTATTTGGTACTGAGAATTTTAATTTTGCTTGTGGAATGGGACCCGGGAGACTATTC
ATGGAATGTCTAAGCTTGAGTTCTGCTTCAAAAATGGATTGCGACAATGATGTTGGGACT
GATGACAGAAGTAGTCAGATATCTGGATGTTGTAGTGTTTCAAGTGGTATGAAGAGGGAG
CAATCTAGCGTTTCGGGTTCATTCAATAGGTCCCCTGGTAGTATCCGTTTTAGCGGAGAT
ACCAGACAGCTAAAGAGTTATGTGGCTGATGCTGCTAAACATGGTCCCAAAAGTAGGATA
ACTTTGTATGCTCCTCCTACAACAGTCGGAGGCTCTGCTTTAGCTTTGCATTACGCGAAT
GTGATTATTGTCGTAGAAAAGCTTCTCCAGTACCCACATCTGGTTGGTGATGAGGGGAGG
GATGATCTATATCAGATGTTACCGACAAGCTTAAGAAAGACGTTGAAGGCTAGTCTGAGA
TCTTATATGAAAGGTTTAGCCATATATGATGCGCCTCTTGCGCATGATTGGAAAGAAAGG
CTTGAAGAGATACTCAAATGTCTTGCACCTTTAGCACATAATATGATCAGGTGGCAAAGC
GAACGGAACTTTGAGCAGCAACAGATTGTTAAGAGAACTAATGTTCTCCTTCTTCAGACA
TTGTATTTTGCCGATTGTCAGAAGATGGAGGCAGTAATTTGCGAGGTGCTTATTGGATTA
AACTACATATGCCGGTTTGAGCAACAACAAAATGCTTTATTGGACTGTGCCAGCAGCATT
GATTTTGAAGATTGTATGGAGTGGCAACTGCAATTCGGAGGTTCTTTTCATTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030157
PEP Infomation

pacid=37454747 transcript=PGSC0003DMT400044455 locus=PGSC0003DMG400017254 ID=PGSC0003DMT400044455.v4.03 annot-version=v4.03
Sequence

MVAEPWCLRMGSQVSTNVKKHSLLIENSKKLSMKKQTQQEKLFIGILSFEVANMMSKIIH
LHKSLTDSEILKLKNEIFKSVGIKALVSDDEDKLLELVLVEKLDDLNRVASVVSRLGKKC
TISALQGFQHVYGDVISGVIDVKDLGFLVKDMEGMVRKMERYVNSTASLYCEMAVLNELE
VATKKFQQNQHEESRKAFEQKLAWQKQDVRHLEDVSLWNQTYDKVVELLARTVCTVYARI
STVFGNNVLVKRDLLGNRGFNEKSGVIVADSKSEVMDADFKKPVLRNNNGSYRSGSIERG
ASGKRSMNHSTQTKVGRNEGSLFGTENFNFACGMGPGRLFMECLSLSSASKMDCDNDVGT
DDRSSQISGCCSVSSGMKREQSSVSGSFNRSPGSIRFSGDTRQLKSYVADAAKHGPKSRI
TLYAPPTTVGGSALALHYANVIIVVEKLLQYPHLVGDEGRDDLYQMLPTSLRKTLKASLR
SYMKGLAIYDAPLAHDWKERLEEILKCLAPLAHNMIRWQSERNFEQQQIVKRTNVLLLQT
LYFADCQKMEAVICEVLIGLNYICRFEQQQNALLDCASSIDFEDCMEWQLQFGGSFHS*

Transcript Sequence

Transcript ID

PGSC0003DMT400044455
Transcript Infomation

pacid=37454747 locus=PGSC0003DMG400017254 ID=PGSC0003DMT400044455.v4.03 annot-version=v4.03
Sequence

ATGGTGGCTGAGCCTTGGTGTTTGAGGATGGGTAGTCAGGTAAGTACTAATGTCAAGAAA
CACTCTTTACTTATTGAAAATTCAAAGAAATTATCTATGAAGAAACAAACTCAACAAGAG
AAGTTGTTTATAGGGATATTGTCATTTGAAGTTGCTAATATGATGTCTAAGATTATTCAT
CTTCATAAATCTTTGACTGATTCTGAGATTCTTAAGCTTAAAAATGAGATCTTTAAGTCT
GTAGGAATAAAGGCTTTAGTTTCTGATGATGAAGATAAGCTTCTTGAATTAGTACTTGTT
GAAAAACTTGATGATTTGAATAGGGTTGCTAGTGTAGTATCTAGGCTTGGGAAAAAATGT
ACAATTTCTGCCTTACAAGGGTTTCAGCATGTTTATGGTGATGTTATTTCTGGGGTTATT
GATGTGAAGGATTTGGGATTTTTGGTTAAAGATATGGAGGGGATGGTTAGGAAAATGGAG
AGGTATGTGAATTCTACTGCTAGTTTGTATTGTGAGATGGCTGTTTTGAATGAATTGGAA
GTGGCAACAAAGAAATTTCAGCAGAATCAGCATGAGGAAAGTAGAAAGGCATTTGAGCAG
AAACTTGCTTGGCAGAAACAAGATGTGAGGCATTTAGAAGATGTTTCACTTTGGAATCAG
ACTTATGATAAAGTTGTTGAACTGTTGGCTAGGACTGTGTGTACTGTATATGCTCGGATC
AGTACGGTGTTTGGCAATAATGTTCTCGTAAAGAGGGATCTTTTAGGTAATCGAGGATTC
AATGAGAAGTCTGGTGTAATTGTGGCAGATAGCAAGTCTGAAGTTATGGATGCTGATTTC
AAGAAACCTGTTTTGAGGAACAACAATGGAAGCTATCGATCGGGGTCAATTGAGAGAGGG
GCGTCGGGGAAAAGGAGCATGAACCATAGTACTCAAACTAAGGTTGGAAGAAATGAAGGG
AGCTTATTTGGTACTGAGAATTTTAATTTTGCTTGTGGAATGGGACCCGGGAGACTATTC
ATGGAATGTCTAAGCTTGAGTTCTGCTTCAAAAATGGATTGCGACAATGATGTTGGGACT
GATGACAGAAGTAGTCAGATATCTGGATGTTGTAGTGTTTCAAGTGGTATGAAGAGGGAG
CAATCTAGCGTTTCGGGTTCATTCAATAGGTCCCCTGGTAGTATCCGTTTTAGCGGAGAT
ACCAGACAGCTAAAGAGTTATGTGGCTGATGCTGCTAAACATGGTCCCAAAAGTAGGATA
ACTTTGTATGCTCCTCCTACAACAGTCGGAGGCTCTGCTTTAGCTTTGCATTACGCGAAT
GTGATTATTGTCGTAGAAAAGCTTCTCCAGTACCCACATCTGGTTGGTGATGAGGGGAGG
GATGATCTATATCAGATGTTACCGACAAGCTTAAGAAAGACGTTGAAGGCTAGTCTGAGA
TCTTATATGAAAGGTTTAGCCATATATGATGCGCCTCTTGCGCATGATTGGAAAGAAAGG
CTTGAAGAGATACTCAAATGTCTTGCACCTTTAGCACATAATATGATCAGGTGGCAAAGC
GAACGGAACTTTGAGCAGCAACAGATTGTTAAGAGAACTAATGTTCTCCTTCTTCAGACA
TTGTATTTTGCCGATTGTCAGAAGATGGAGGCAGTAATTTGCGAGGTGCTTATTGGATTA
AACTACATATGCCGGTTTGAGCAACAACAAAATGCTTTATTGGACTGTGCCAGCAGCATT
GATTTTGAAGATTGTATGGAGTGGCAACTGCAATTCGGAGGTTCTTTTCATTCTTGA