Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044438
CDS Infomation

pacid=37457122 polypeptide=PGSC0003DMP400030145 locus=PGSC0003DMG400017246 ID=PGSC0003DMT400044438.v4.03 annot-version=v4.03
Sequence

ATGGTACTCTCTAGCACTGATGATTTTCAGGTCACAGTGGAGAAAAGTTATGACAAAATG
AGTGAATTAAAAGCCTTTGATGATACTAAGGCTGGTGTCAAAGGGCTTGTTGATGCTGGA
ATCACTAAAATACCTCAAATATTCATTCTACCACCAAAAAACAGGCCGGAGTTATCGGAT
ACAAATGAAACACAATTCATTTTCCCTGTGATAGATCTTGAAGGCATCGACGAGGACTCA
ATCAAGCATAAAGAGATCGCGGACAAAGTTCGAGATGCATCGGAGACATGGGGTTTCTTC
CAAGTGGTGAATCATGGGATTCCAACATCCGTCCTGGAAGAAATGCTGCAAGGAACACGG
CAGTTTTTTGAGCAAGATGTCGAGATTAAGAAACAGCATTACAGTAGAGATAGTACGAAA
AGAGTGATTCATACTAGCAATTTTGATTTGTATAGCCCTTCTGTTCCAGCTGCAAATTGG
AGAGACACACTTTTCTGTTTAATGGCTCCTGATCCTCCCAGTCCACAAGAATTGCCAACA
GCATGCGGAGAAATACTAATGGAGTACTCTAAGGATGTGATGAAATTAGGCTTCTCCTTA
CTTGAATTATTATCAGAAGGTCTTGGTCTTGATCGTTGCCATCTCAAAGATATGGATTGT
GCGGAGGGGCTAGGTATTTTGGGACATTACTATCCAGCATGCCCTCAGCCAGAACTCGCG
ATAGGCACCAACAAACATTCTGACAATGATTTTATCACAGTTCTTATACAAGATCATATC
GGAGGACTTCAAGTGCTTCACCAGAATCAGTGGGTTGATGTTCCTCCTACACCTGGTGCT
CTTGTTGTGAACATCGGAGATCTTCTGCAGGCTAGTATTCTTTGTTTTTCTATACCATAT
ACGACTACGATCAATAAGAGGCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030145
PEP Infomation

pacid=37457122 transcript=PGSC0003DMT400044438 locus=PGSC0003DMG400017246 ID=PGSC0003DMT400044438.v4.03 annot-version=v4.03
Sequence

MVLSSTDDFQVTVEKSYDKMSELKAFDDTKAGVKGLVDAGITKIPQIFILPPKNRPELSD
TNETQFIFPVIDLEGIDEDSIKHKEIADKVRDASETWGFFQVVNHGIPTSVLEEMLQGTR
QFFEQDVEIKKQHYSRDSTKRVIHTSNFDLYSPSVPAANWRDTLFCLMAPDPPSPQELPT
ACGEILMEYSKDVMKLGFSLLELLSEGLGLDRCHLKDMDCAEGLGILGHYYPACPQPELA
IGTNKHSDNDFITVLIQDHIGGLQVLHQNQWVDVPPTPGALVVNIGDLLQASILCFSIPY
TTTINKRH*

Transcript Sequence

Transcript ID

PGSC0003DMT400044438
Transcript Infomation

pacid=37457122 locus=PGSC0003DMG400017246 ID=PGSC0003DMT400044438.v4.03 annot-version=v4.03
Sequence

ATGGTACTCTCTAGCACTGATGATTTTCAGGTCACAGTGGAGAAAAGTTATGACAAAATG
AGTGAATTAAAAGCCTTTGATGATACTAAGGCTGGTGTCAAAGGGCTTGTTGATGCTGGA
ATCACTAAAATACCTCAAATATTCATTCTACCACCAAAAAACAGGCCGGAGTTATCGGAT
ACAAATGAAACACAATTCATTTTCCCTGTGATAGATCTTGAAGGCATCGACGAGGACTCA
ATCAAGCATAAAGAGATCGCGGACAAAGTTCGAGATGCATCGGAGACATGGGGTTTCTTC
CAAGTGGTGAATCATGGGATTCCAACATCCGTCCTGGAAGAAATGCTGCAAGGAACACGG
CAGTTTTTTGAGCAAGATGTCGAGATTAAGAAACAGCATTACAGTAGAGATAGTACGAAA
AGAGTGATTCATACTAGCAATTTTGATTTGTATAGCCCTTCTGTTCCAGCTGCAAATTGG
AGAGACACACTTTTCTGTTTAATGGCTCCTGATCCTCCCAGTCCACAAGAATTGCCAACA
GCATGCGGAGAAATACTAATGGAGTACTCTAAGGATGTGATGAAATTAGGCTTCTCCTTA
CTTGAATTATTATCAGAAGGTCTTGGTCTTGATCGTTGCCATCTCAAAGATATGGATTGT
GCGGAGGGGCTAGGTATTTTGGGACATTACTATCCAGCATGCCCTCAGCCAGAACTCGCG
ATAGGCACCAACAAACATTCTGACAATGATTTTATCACAGTTCTTATACAAGATCATATC
GGAGGACTTCAAGTGCTTCACCAGAATCAGTGGGTTGATGTTCCTCCTACACCTGGTGCT
CTTGTTGTGAACATCGGAGATCTTCTGCAGGCTAGTATTCTTTGTTTTTCTATACCATAT
ACGACTACGATCAATAAGAGGCACTGA