Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044435
CDS Infomation

pacid=37458127 polypeptide=PGSC0003DMP400030143 locus=PGSC0003DMG400017245 ID=PGSC0003DMT400044435.v4.03 annot-version=v4.03
Sequence

ATGGAAAAAGTAGAAGAGAAGATGGTTTTCTCCAGAGATGAAGAATTTCAGGCTACATTA
CAACCAAATTATGATAAACATAGTGAATTAAAAGCCTTTGATGACACAAAAGCTGGTGTC
AAAGGGCTTGTTGATGCTGGAAATAGTACTGAAGTGCCTCGGATATTCGTTCATCCACGA
GAAAGCATACATGACTCCTCAGGCTTTACTGAGAAGGAGTTTGTTTTTCCAGTAATAGAT
CTTGAAGGCATTGATAATCCAATGAGGCATAAAGAGATTGTTGACAAAGTTCGAGATGCA
TCGGAGACATGGGGATTTTTTCAAGTGGTCAATCATGGCATTCCATTACCTGTCCTTGAA
GAAATGTTGCAAGGAGCACGAAGATTTTTCGAGCAAGATGTGGAGATAAAGAAACAATAT
TATACTCGAGATACTACGAAGAAAGTAGCACATGTTAGCAATTTTGATTTGTTTAGCCCC
TCTGTTCCAGCAGCAAGCTGGAGAGACTCACTTTACTGCTTTATGTGTCCTAATCCTCCT
AGTCCAGAGGAATTTCCAACAGCATGCAGGGAGATTTTGATTGAATTCTCTAAGAAGATG
ATGAAATTGGGCTACTCATTATTCGAATTATTGTCCGAGGGTCTTGGTCTCAATCCTTGT
CATCTTAAAGATATGAACTGTGCTGAGGGGCTATCAATTGCCCAACATTACTATCCAGCA
TGTCCTCAGCCAGAACTCACCATAGGCACCAGACAGCATTCGGACTGTGTTTTTATCACA
GTGCTTCTACAAGATGATATAGGAGGTCTCCAAGTCCGTCACCAAAATCAGTGGATTGAT
GTTCCTCCTACACCTGGTGCTCTAGTAGTAAATATTGGAGATCTGTTACAGCTCATATCA
AATGACAAGTATATAAGTGTTGAGCACAGAGTATTGTCAAACAAAGTAGGTCCAAGAATA
TCAGTGCCATGTTTCTTCAGCACTGGTGCATTTCCCTCTCCAAGGATTTATGGACCAATT
AAGGAATTGTCATCAGAATGTAATCCGCCAAAGTATCGTGCAACCACAGTGAAGGAATAT
ACTGACTACTTCCGCAAGAAAGGCTTTGATGGAACTTCTACACTGCTGGATTACAAGATC
CTGTCCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030143
PEP Infomation

pacid=37458127 transcript=PGSC0003DMT400044435 locus=PGSC0003DMG400017245 ID=PGSC0003DMT400044435.v4.03 annot-version=v4.03
Sequence

MEKVEEKMVFSRDEEFQATLQPNYDKHSELKAFDDTKAGVKGLVDAGNSTEVPRIFVHPR
ESIHDSSGFTEKEFVFPVIDLEGIDNPMRHKEIVDKVRDASETWGFFQVVNHGIPLPVLE
EMLQGARRFFEQDVEIKKQYYTRDTTKKVAHVSNFDLFSPSVPAASWRDSLYCFMCPNPP
SPEEFPTACREILIEFSKKMMKLGYSLFELLSEGLGLNPCHLKDMNCAEGLSIAQHYYPA
CPQPELTIGTRQHSDCVFITVLLQDDIGGLQVRHQNQWIDVPPTPGALVVNIGDLLQLIS
NDKYISVEHRVLSNKVGPRISVPCFFSTGAFPSPRIYGPIKELSSECNPPKYRATTVKEY
TDYFRKKGFDGTSTLLDYKILS*

Transcript Sequence

Transcript ID

PGSC0003DMT400044435
Transcript Infomation

pacid=37458127 locus=PGSC0003DMG400017245 ID=PGSC0003DMT400044435.v4.03 annot-version=v4.03
Sequence

ATGGAAAAAGTAGAAGAGAAGATGGTTTTCTCCAGAGATGAAGAATTTCAGGCTACATTA
CAACCAAATTATGATAAACATAGTGAATTAAAAGCCTTTGATGACACAAAAGCTGGTGTC
AAAGGGCTTGTTGATGCTGGAAATAGTACTGAAGTGCCTCGGATATTCGTTCATCCACGA
GAAAGCATACATGACTCCTCAGGCTTTACTGAGAAGGAGTTTGTTTTTCCAGTAATAGAT
CTTGAAGGCATTGATAATCCAATGAGGCATAAAGAGATTGTTGACAAAGTTCGAGATGCA
TCGGAGACATGGGGATTTTTTCAAGTGGTCAATCATGGCATTCCATTACCTGTCCTTGAA
GAAATGTTGCAAGGAGCACGAAGATTTTTCGAGCAAGATGTGGAGATAAAGAAACAATAT
TATACTCGAGATACTACGAAGAAAGTAGCACATGTTAGCAATTTTGATTTGTTTAGCCCC
TCTGTTCCAGCAGCAAGCTGGAGAGACTCACTTTACTGCTTTATGTGTCCTAATCCTCCT
AGTCCAGAGGAATTTCCAACAGCATGCAGGGAGATTTTGATTGAATTCTCTAAGAAGATG
ATGAAATTGGGCTACTCATTATTCGAATTATTGTCCGAGGGTCTTGGTCTCAATCCTTGT
CATCTTAAAGATATGAACTGTGCTGAGGGGCTATCAATTGCCCAACATTACTATCCAGCA
TGTCCTCAGCCAGAACTCACCATAGGCACCAGACAGCATTCGGACTGTGTTTTTATCACA
GTGCTTCTACAAGATGATATAGGAGGTCTCCAAGTCCGTCACCAAAATCAGTGGATTGAT
GTTCCTCCTACACCTGGTGCTCTAGTAGTAAATATTGGAGATCTGTTACAGCTCATATCA
AATGACAAGTATATAAGTGTTGAGCACAGAGTATTGTCAAACAAAGTAGGTCCAAGAATA
TCAGTGCCATGTTTCTTCAGCACTGGTGCATTTCCCTCTCCAAGGATTTATGGACCAATT
AAGGAATTGTCATCAGAATGTAATCCGCCAAAGTATCGTGCAACCACAGTGAAGGAATAT
ACTGACTACTTCCGCAAGAAAGGCTTTGATGGAACTTCTACACTGCTGGATTACAAGATC
CTGTCCTAA