Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044423
CDS Infomation

pacid=37458344 polypeptide=PGSC0003DMP400030136 locus=PGSC0003DMG403017241 ID=PGSC0003DMT400044423.v4.03 annot-version=v4.03
Sequence

ATGTCCAGAATTGCAGAGTCTCAAGCTGAATTAACAATGGAATATGATCGATTGAAGGAG
TTAAAGGCTTTCGATGATACAAAAGCCGGTGTTAAAGGATTAGTTGATTCCGGAATTGTG
GAAATTCCAAGAATATTCATTAGGCCACCTGATGAACTTGTTGAAGAGTTGACTCAGGGT
AAGTCAACTCTACATTGTCCTGTTATAGATTTCAGTGGCATAGAAGTTCAAGATCATCGT
AAGAAGGTTGTCGATGAAATAAGGGAAGCATCGGAGAAGTGGGGATTTTTCCAACTTATA
AATCATGGGATTTCTTCAAGTGTATTGGAAGGAATGATTGATGGGATTCGTAAATTTCAC
GAACAAGATGCTGAGGTAAAGAAAGAGTACTATTCGCGTGATTTCACATCGAGAAGAGTA
AGATATGAGAGCAACTTTGATCTTTATCAGTCAAAAGCTGCAAACTGGAGGGATACATTG
AACATTTCTTTGCTACATTCAAGTCATATTGAACCGGAAGAAATACCAGCAGTTTGCAGG
AACGTAATCGTTGAGTATATAAATCATGTCACAAAGCTAGGAGAAACTATATTCAGCATT
TTATCAGAAGCACTCGGGCTAAAACCAGATCACTTGAAAGATATGGAATGTACTAAAGGA
AAATCAGTAGTATGTCATTACTATCCAGCATGTCCACAGCCAGAGCTAACTCTTGGCGCT
GCGAACCATACAGATCCTGCTTTCCTTACTGTTCTTCTTCAAGATCAAATTGGTGGCCTT
CAAGTCATGCACAATTACCAATGGATCGATGTTAAACCGGTTTCACAAGGATTGGTTGTT
AATATTGGCGAAGCACTTCAGATCCTATCAAATGACAAGTTTGTGAGTGCAAATCATAGA
GTTATAGCGAATGGGGTAGGACCAAGAATGTCAGTGGCATGCTTCTTCAATGGTAGTTTT
GCACAACCAAAGATCTACGGTCCGACCAAAGATCTAATATCAGAAGAAAATCCCCTTTTG
TATAAAGAATTTACAGTAACTGATTACATTGCTAAGTTTATGTCCAGGCCTCTTGGTACA
TGTGCCCTTGACCTTTTCAGACTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030136
PEP Infomation

pacid=37458344 transcript=PGSC0003DMT400044423 locus=PGSC0003DMG403017241 ID=PGSC0003DMT400044423.v4.03 annot-version=v4.03
Sequence

MSRIAESQAELTMEYDRLKELKAFDDTKAGVKGLVDSGIVEIPRIFIRPPDELVEELTQG
KSTLHCPVIDFSGIEVQDHRKKVVDEIREASEKWGFFQLINHGISSSVLEGMIDGIRKFH
EQDAEVKKEYYSRDFTSRRVRYESNFDLYQSKAANWRDTLNISLLHSSHIEPEEIPAVCR
NVIVEYINHVTKLGETIFSILSEALGLKPDHLKDMECTKGKSVVCHYYPACPQPELTLGA
ANHTDPAFLTVLLQDQIGGLQVMHNYQWIDVKPVSQGLVVNIGEALQILSNDKFVSANHR
VIANGVGPRMSVACFFNGSFAQPKIYGPTKDLISEENPLLYKEFTVTDYIAKFMSRPLGT
CALDLFRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400044423
Transcript Infomation

pacid=37458344 locus=PGSC0003DMG403017241 ID=PGSC0003DMT400044423.v4.03 annot-version=v4.03
Sequence

ATGTCCAGAATTGCAGAGTCTCAAGCTGAATTAACAATGGAATATGATCGATTGAAGGAG
TTAAAGGCTTTCGATGATACAAAAGCCGGTGTTAAAGGATTAGTTGATTCCGGAATTGTG
GAAATTCCAAGAATATTCATTAGGCCACCTGATGAACTTGTTGAAGAGTTGACTCAGGGT
AAGTCAACTCTACATTGTCCTGTTATAGATTTCAGTGGCATAGAAGTTCAAGATCATCGT
AAGAAGGTTGTCGATGAAATAAGGGAAGCATCGGAGAAGTGGGGATTTTTCCAACTTATA
AATCATGGGATTTCTTCAAGTGTATTGGAAGGAATGATTGATGGGATTCGTAAATTTCAC
GAACAAGATGCTGAGGTAAAGAAAGAGTACTATTCGCGTGATTTCACATCGAGAAGAGTA
AGATATGAGAGCAACTTTGATCTTTATCAGTCAAAAGCTGCAAACTGGAGGGATACATTG
AACATTTCTTTGCTACATTCAAGTCATATTGAACCGGAAGAAATACCAGCAGTTTGCAGG
AACGTAATCGTTGAGTATATAAATCATGTCACAAAGCTAGGAGAAACTATATTCAGCATT
TTATCAGAAGCACTCGGGCTAAAACCAGATCACTTGAAAGATATGGAATGTACTAAAGGA
AAATCAGTAGTATGTCATTACTATCCAGCATGTCCACAGCCAGAGCTAACTCTTGGCGCT
GCGAACCATACAGATCCTGCTTTCCTTACTGTTCTTCTTCAAGATCAAATTGGTGGCCTT
CAAGTCATGCACAATTACCAATGGATCGATGTTAAACCGGTTTCACAAGGATTGGTTGTT
AATATTGGCGAAGCACTTCAGATCCTATCAAATGACAAGTTTGTGAGTGCAAATCATAGA
GTTATAGCGAATGGGGTAGGACCAAGAATGTCAGTGGCATGCTTCTTCAATGGTAGTTTT
GCACAACCAAAGATCTACGGTCCGACCAAAGATCTAATATCAGAAGAAAATCCCCTTTTG
TATAAAGAATTTACAGTAACTGATTACATTGCTAAGTTTATGTCCAGGCCTCTTGGTACA
TGTGCCCTTGACCTTTTCAGACTGTGA