Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044420
CDS Infomation

pacid=37456519 polypeptide=PGSC0003DMP400030135 locus=PGSC0003DMG402017241 ID=PGSC0003DMT400044420.v4.03 annot-version=v4.03
Sequence

ATGGATTATGATCCATGGGATGAGGTTAAGGCTATTGATGATACAAAGGCTGGTATTAAG
GGACTAGTTGATTCTGGAGTAGTCGAGATTCCAAGAATTTTCATTAGGCCACCTCATGAA
CTTGCTGAGGAGTTGAATATGTGCAAGTCGACTCTACAGGTTCCAGTGGTGGATCTCAGT
GGCATACAAGTTGAAGATGGGCGTAAGAAGATTGTTGATGAAATAAGGGAAGCATCAGAG
AAATGGGGCTTTTTCCAAGTGATAAATCATGGGGTTCCTTCAAGTGTTTTGGAAGGAATG
ATCGATGGGACTCGTAAATTTCATGAACAAGATGTTGAAGTGAAGAAAGAGTACTATTCG
TCTAATCCAACCAGAGGAGTTAGATATGAGAGCAATCTTCAACTGTTGACAACAAAAGGA
AGGACTGCAACCTGGAAGGATTCATTACATATCTCTGCGCTAGTTTCTGGATACATTGAA
CCTGAAGAAATACCACCAGTTTGCAGGAGAACATTCCTTGAGTACAAAAATCATGTCACA
AAACTAGGAGACATTCTTCTTGGCTTACTATCAGAAGCTCTTGGGCTAAAACCTGACCAC
TTGAAAGCTGCGGAATGTGACAAAGGACTAGGGTTGGCATGCCATTACTACCCGGCATGC
CCACAGCCAGAGCTAACTCTTGGTAGTGGTAAGCATACAGATCCTGTTTTCCTTACCATT
CTGCTTCAAGATCAGATTGGTGGGCTCCAAGTCATGTGTGATAACCAATGGGCCGATGTT
GAACCGATTGAACATGGTCTGGTTGTTAATATTGGTGACCTTCTTCAGATCCTATCAAAT
GACAAGTTTGTAAGTGTGATTCATAGAGCTGTAGCGAAAAAGGTAGGACCAAGGATTTCA
GTGGCTTGCTTCTTCACTGGAGATTCTTCACCTCCGAAGATGTATGGTCCAATCAAAGAG
CTCATATCAGAAGAAAACCCCCCACTATATGAAGACTTTCTAGTAGCTGATTATTTCGCT
AAGTATTTGTCCAGGCCTCTTGATAATACTGGTCTTGATCTTTTCAGACTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030135
PEP Infomation

pacid=37456519 transcript=PGSC0003DMT400044420 locus=PGSC0003DMG402017241 ID=PGSC0003DMT400044420.v4.03 annot-version=v4.03
Sequence

MDYDPWDEVKAIDDTKAGIKGLVDSGVVEIPRIFIRPPHELAEELNMCKSTLQVPVVDLS
GIQVEDGRKKIVDEIREASEKWGFFQVINHGVPSSVLEGMIDGTRKFHEQDVEVKKEYYS
SNPTRGVRYESNLQLLTTKGRTATWKDSLHISALVSGYIEPEEIPPVCRRTFLEYKNHVT
KLGDILLGLLSEALGLKPDHLKAAECDKGLGLACHYYPACPQPELTLGSGKHTDPVFLTI
LLQDQIGGLQVMCDNQWADVEPIEHGLVVNIGDLLQILSNDKFVSVIHRAVAKKVGPRIS
VACFFTGDSSPPKMYGPIKELISEENPPLYEDFLVADYFAKYLSRPLDNTGLDLFRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400044420
Transcript Infomation

pacid=37456519 locus=PGSC0003DMG402017241 ID=PGSC0003DMT400044420.v4.03 annot-version=v4.03
Sequence

ATGGATTATGATCCATGGGATGAGGTTAAGGCTATTGATGATACAAAGGCTGGTATTAAG
GGACTAGTTGATTCTGGAGTAGTCGAGATTCCAAGAATTTTCATTAGGCCACCTCATGAA
CTTGCTGAGGAGTTGAATATGTGCAAGTCGACTCTACAGGTTCCAGTGGTGGATCTCAGT
GGCATACAAGTTGAAGATGGGCGTAAGAAGATTGTTGATGAAATAAGGGAAGCATCAGAG
AAATGGGGCTTTTTCCAAGTGATAAATCATGGGGTTCCTTCAAGTGTTTTGGAAGGAATG
ATCGATGGGACTCGTAAATTTCATGAACAAGATGTTGAAGTGAAGAAAGAGTACTATTCG
TCTAATCCAACCAGAGGAGTTAGATATGAGAGCAATCTTCAACTGTTGACAACAAAAGGA
AGGACTGCAACCTGGAAGGATTCATTACATATCTCTGCGCTAGTTTCTGGATACATTGAA
CCTGAAGAAATACCACCAGTTTGCAGGAGAACATTCCTTGAGTACAAAAATCATGTCACA
AAACTAGGAGACATTCTTCTTGGCTTACTATCAGAAGCTCTTGGGCTAAAACCTGACCAC
TTGAAAGCTGCGGAATGTGACAAAGGACTAGGGTTGGCATGCCATTACTACCCGGCATGC
CCACAGCCAGAGCTAACTCTTGGTAGTGGTAAGCATACAGATCCTGTTTTCCTTACCATT
CTGCTTCAAGATCAGATTGGTGGGCTCCAAGTCATGTGTGATAACCAATGGGCCGATGTT
GAACCGATTGAACATGGTCTGGTTGTTAATATTGGTGACCTTCTTCAGATCCTATCAAAT
GACAAGTTTGTAAGTGTGATTCATAGAGCTGTAGCGAAAAAGGTAGGACCAAGGATTTCA
GTGGCTTGCTTCTTCACTGGAGATTCTTCACCTCCGAAGATGTATGGTCCAATCAAAGAG
CTCATATCAGAAGAAAACCCCCCACTATATGAAGACTTTCTAGTAGCTGATTATTTCGCT
AAGTATTTGTCCAGGCCTCTTGATAATACTGGTCTTGATCTTTTCAGACTGTGA