Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044419
CDS Infomation

pacid=37456944 polypeptide=PGSC0003DMP400030134 locus=PGSC0003DMG401017241 ID=PGSC0003DMT400044419.v4.03 annot-version=v4.03
Sequence

ATGGATGAGAGAAAAGCTGGTATTAAGGGACTAGTTGACTCTGTAATAGTTGCTGAGGAG
TTGAATATGTGTAAGTCAACTCTACAGGTTCCAGTAGTGGATCTAAGTGGCATAGAAGTT
GAAGATGGGCGTAAGAAGATTGTTGATGAAATAAGGGAAGCATCTGAGAAATGGGGAATT
TTCCAAGTGATAAATCATGGGATTCCTTCAAGTGTTTTGGAAGGAATAATTGATGGGACT
CGTAAATTTCATGAACAAGATGTTGAAGTGAAGAATCAGTACTACACGTCTGATCCAACA
GCAAGACGAGTTAGATATGAGAGCAATCTTCATCTGTACAAAACAAAAGGAAAGACAGCA
AACTCGAAAGATTCATTACACATCCCGTGGCAAGATTCTGGTGACAATGAACCTGAAGAA
ATACCACCAGTTTGCAGAAAACCATCCGTTGAGTACATAAATCATGTCATAAAACTTCAA
CACATTCTTCTTGGCTTACTATCAGAAGCTCTCGGGCTAAATCCAAACCACTTGAAAGCT
ATCGGATGTGACAAAGGACCAGGGTTGGTATGCAATTACTACCCGGCATGCCCACTGCCA
GAGCTAACTCTTGGTAAGCATACAGATCCTGTTTTCCTTACCATTCTGCTTCAAGATCAG
AATGGTGGGCTCCAAGTCATGTGTGATAACCAATGGGCCGATGTTACACCGATTGAACAT
GGTTTAGTTGTTAACAGAGGCGAATCCAGGATTTTAAGAAAACGGGTGCACCATTGCTTT
AAAAATAATATCAAAAAAATTATAATAACAATAACTAAGCGAGCAATACATAAAAATTAC
ATTACCACAAAAAATATCATCAGTTTACAATTGTACTCGACGAGACTTCATATTTTGAAA
ATGATCTATAATAGCATCATTACTTACATTTTCAAATATCTTCCGCTCTATCTTACAAAC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400030134
PEP Infomation

pacid=37456944 transcript=PGSC0003DMT400044419 locus=PGSC0003DMG401017241 ID=PGSC0003DMT400044419.v4.03 annot-version=v4.03
Sequence

MDERKAGIKGLVDSVIVAEELNMCKSTLQVPVVDLSGIEVEDGRKKIVDEIREASEKWGI
FQVINHGIPSSVLEGIIDGTRKFHEQDVEVKNQYYTSDPTARRVRYESNLHLYKTKGKTA
NSKDSLHIPWQDSGDNEPEEIPPVCRKPSVEYINHVIKLQHILLGLLSEALGLNPNHLKA
IGCDKGPGLVCNYYPACPLPELTLGKHTDPVFLTILLQDQNGGLQVMCDNQWADVTPIEH
GLVVNRGESRILRKRVHHCFKNNIKKIIITITKRAIHKNYITTKNIISLQLYSTRLHILK
MIYNSIITYIFKYLPLYLTN*

Transcript Sequence

Transcript ID

PGSC0003DMT400044419
Transcript Infomation

pacid=37456944 locus=PGSC0003DMG401017241 ID=PGSC0003DMT400044419.v4.03 annot-version=v4.03
Sequence

ATGGATGAGAGAAAAGCTGGTATTAAGGGACTAGTTGACTCTGTAATAGTTGCTGAGGAG
TTGAATATGTGTAAGTCAACTCTACAGGTTCCAGTAGTGGATCTAAGTGGCATAGAAGTT
GAAGATGGGCGTAAGAAGATTGTTGATGAAATAAGGGAAGCATCTGAGAAATGGGGAATT
TTCCAAGTGATAAATCATGGGATTCCTTCAAGTGTTTTGGAAGGAATAATTGATGGGACT
CGTAAATTTCATGAACAAGATGTTGAAGTGAAGAATCAGTACTACACGTCTGATCCAACA
GCAAGACGAGTTAGATATGAGAGCAATCTTCATCTGTACAAAACAAAAGGAAAGACAGCA
AACTCGAAAGATTCATTACACATCCCGTGGCAAGATTCTGGTGACAATGAACCTGAAGAA
ATACCACCAGTTTGCAGAAAACCATCCGTTGAGTACATAAATCATGTCATAAAACTTCAA
CACATTCTTCTTGGCTTACTATCAGAAGCTCTCGGGCTAAATCCAAACCACTTGAAAGCT
ATCGGATGTGACAAAGGACCAGGGTTGGTATGCAATTACTACCCGGCATGCCCACTGCCA
GAGCTAACTCTTGGTAAGCATACAGATCCTGTTTTCCTTACCATTCTGCTTCAAGATCAG
AATGGTGGGCTCCAAGTCATGTGTGATAACCAATGGGCCGATGTTACACCGATTGAACAT
GGTTTAGTTGTTAACAGAGGCGAATCCAGGATTTTAAGAAAACGGGTGCACCATTGCTTT
AAAAATAATATCAAAAAAATTATAATAACAATAACTAAGCGAGCAATACATAAAAATTAC
ATTACCACAAAAAATATCATCAGTTTACAATTGTACTCGACGAGACTTCATATTTTGAAA
ATGATCTATAATAGCATCATTACTTACATTTTCAAATATCTTCCGCTCTATCTTACAAAC
TAA