Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044411
CDS Infomation

pacid=37458385 polypeptide=PGSC0003DMP400030131 locus=PGSC0003DMG402017239 ID=PGSC0003DMT400044411.v4.03 annot-version=v4.03
Sequence

ATGGATTATGATCCATCAGATGAGAAAAAGGCTATTGATGATGCAAAAGCTGGTGTTAAG
GGACTTGTTGATTCTGGAATAGTCGAGATTCCAAGAATTTTCATTAGGCCACCTCATGAA
CTTGCTGAGGAGTTGAATATGTGCAAGTCAACTTTACAGGTTCCGGTTGTGGATCTAAGT
GGCATACATGTTGAAGATGGGCGTAAGAAGATTGTTGATGAAATAAGGGAAGCATCTGAG
AAATGGGGCCTTTTCCAACTGATAAATCATGGGATTCCTTCTAGTGTTTTGGAAGGAATG
ATTGATGAGACTCGTAAATTTCATGAACAAGATGTTGAAGTGAAGAAAGAGTACTATTCG
TCTGATCCAACAGCCAGACAAGTTAGATATGATTGCAATCTTCATGTGAACAAAACAAAA
GGAAAGATTGCAAACTGGAAGGATACATTATACATCTCTGAGCTAGTTTCTGGTCACATT
GAACCTGAAGAAATACCACAAGTTTGCAGGAAAACATCCGTTGAGTACATAAATCATGTT
GTAAAACTAGAAGATATTCTTCTTGGCTTACTATCAGAAGCTCTCGGACTAAAGCCAAAC
CACTTAAAAGCCACTGAATGTGACAAAAGACAGTTAATGGTATGCCATTACTACCTGGCA
TGCCCACTGCCAGAGCTAACTCTTGGTACCAATAAGCATACAGATCCTGTTTTCGTTACC
ATTCTGTTTCAAGATCAGAATGGTGGGCTCCAAGTCATGCGTGATAACCAATGGGCCGAT
GATACACCGATTGAACATGGTTTGGTTGTTAATATTGGTGACCTCCTTCAGATCCTATCA
AATGACAAGTTTGTGAGTGCAATTCATAGAGTTGTAGCGAAAAAGATAGGACCAAGGATT
TCAGTGGCATGCTTTTCAACGGAGTTTCTACCTCTCCAAAGCTGTATGGTCCAATCAAAG
AGCTCATATCTGAAGAAAACCCCCCACTATATAAAGATTTTCAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030131
PEP Infomation

pacid=37458385 transcript=PGSC0003DMT400044411 locus=PGSC0003DMG402017239 ID=PGSC0003DMT400044411.v4.03 annot-version=v4.03
Sequence

MDYDPSDEKKAIDDAKAGVKGLVDSGIVEIPRIFIRPPHELAEELNMCKSTLQVPVVDLS
GIHVEDGRKKIVDEIREASEKWGLFQLINHGIPSSVLEGMIDETRKFHEQDVEVKKEYYS
SDPTARQVRYDCNLHVNKTKGKIANWKDTLYISELVSGHIEPEEIPQVCRKTSVEYINHV
VKLEDILLGLLSEALGLKPNHLKATECDKRQLMVCHYYLACPLPELTLGTNKHTDPVFVT
ILFQDQNGGLQVMRDNQWADDTPIEHGLVVNIGDLLQILSNDKFVSAIHRVVAKKIGPRI
SVACFSTEFLPLQSCMVQSKSSYLKKTPHYIKIFK*

Transcript Sequence

Transcript ID

PGSC0003DMT400044411
Transcript Infomation

pacid=37458385 locus=PGSC0003DMG402017239 ID=PGSC0003DMT400044411.v4.03 annot-version=v4.03
Sequence

ATGGATTATGATCCATCAGATGAGAAAAAGGCTATTGATGATGCAAAAGCTGGTGTTAAG
GGACTTGTTGATTCTGGAATAGTCGAGATTCCAAGAATTTTCATTAGGCCACCTCATGAA
CTTGCTGAGGAGTTGAATATGTGCAAGTCAACTTTACAGGTTCCGGTTGTGGATCTAAGT
GGCATACATGTTGAAGATGGGCGTAAGAAGATTGTTGATGAAATAAGGGAAGCATCTGAG
AAATGGGGCCTTTTCCAACTGATAAATCATGGGATTCCTTCTAGTGTTTTGGAAGGAATG
ATTGATGAGACTCGTAAATTTCATGAACAAGATGTTGAAGTGAAGAAAGAGTACTATTCG
TCTGATCCAACAGCCAGACAAGTTAGATATGATTGCAATCTTCATGTGAACAAAACAAAA
GGAAAGATTGCAAACTGGAAGGATACATTATACATCTCTGAGCTAGTTTCTGGTCACATT
GAACCTGAAGAAATACCACAAGTTTGCAGGAAAACATCCGTTGAGTACATAAATCATGTT
GTAAAACTAGAAGATATTCTTCTTGGCTTACTATCAGAAGCTCTCGGACTAAAGCCAAAC
CACTTAAAAGCCACTGAATGTGACAAAAGACAGTTAATGGTATGCCATTACTACCTGGCA
TGCCCACTGCCAGAGCTAACTCTTGGTACCAATAAGCATACAGATCCTGTTTTCGTTACC
ATTCTGTTTCAAGATCAGAATGGTGGGCTCCAAGTCATGCGTGATAACCAATGGGCCGAT
GATACACCGATTGAACATGGTTTGGTTGTTAATATTGGTGACCTCCTTCAGATCCTATCA
AATGACAAGTTTGTGAGTGCAATTCATAGAGTTGTAGCGAAAAAGATAGGACCAAGGATT
TCAGTGGCATGCTTTTCAACGGAGTTTCTACCTCTCCAAAGCTGTATGGTCCAATCAAAG
AGCTCATATCTGAAGAAAACCCCCCACTATATAAAGATTTTCAAGTAG