Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044371
CDS Infomation

pacid=37456095 polypeptide=PGSC0003DMP400030107 locus=PGSC0003DMG400017227 ID=PGSC0003DMT400044371.v4.03 annot-version=v4.03
Sequence

ATGTCGAGGAAGAAGGTTATGGATTCTTTTTCTTTAGATGATATAATCAACCGTTTACTT
GAAGTTCGTAATCGACCAGGGAAACAAGTTCAGCTATCTGAGGCTGAAATTAGGTATCTT
TGTCTTGAGTCTAAAGAAATTTTCTTGAAGCAGCCTAATCTTCTTGAGTTGGATGCACCA
ATAAAGATCTGTGGGGATATTCATGGTCAGTATTCTGATCTACTGAGGTTATTCGAATAT
GGTGGATTACCTCCTAGATCCAATTACCTATTCTTGGGCGATTATGTGGATCGTGGGAAG
CAAAGTCTGGAAACAATATGCCTTATGTTTGCATATAAAATAAAGTATCCCGAGAACTTT
TTCCTTTTGAGGGGAAATCATGAATGTGCTTCCATTAATCGTATATATGGATTCTATGAT
GAGTGCAAGCGAAGATTCAATGTTCGATTGTGGAAGATATTCACAGAATGTTTTAACTGC
CTGCCTGTGGCAGCTCTGGTTGATGAAAAGATATTGTGCATGCATGGTGGACTCTCCCCC
GACCTTCATCATCTTGATCAGATACGGAACCTCCATCGACCAACTGATGTTCCAGAAGCT
GGACTGCTTTGTGATCTTTTATGGTCAGATCCTAGTAGGGACGTTAGAGGGTGGGGAATG
AATGATAGGGGTGTTTCCTACACATTTGGTCCAGATAAGGTGACAGAGTATCTTCAGAAG
CTAGATCTTGACCTCATTTGCCGTGCCCATCAGGTCGTGGAAGATGGGTACGAGTTTTTC
GCTGACAGACAGCTAGTGACTATATTCTCAGCCCCTAATTATTGTGGAGAGTTTGACAAT
GCTGGTGCCGTGATGAGTGTGGATGAGACACTGATGTGCTCTTTCCAGATATTAAAGCCT
GCAGAGAAGAAGCCTAAGTTTGGATTTGGAAGCACTACTAAAAATGGAACTTCTCTGACC
AAAACTAAGTCATTTCTGGGTAAAATGGGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400030107
PEP Infomation

pacid=37456095 transcript=PGSC0003DMT400044371 locus=PGSC0003DMG400017227 ID=PGSC0003DMT400044371.v4.03 annot-version=v4.03
Sequence

MSRKKVMDSFSLDDIINRLLEVRNRPGKQVQLSEAEIRYLCLESKEIFLKQPNLLELDAP
IKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLMFAYKIKYPENF
FLLRGNHECASINRIYGFYDECKRRFNVRLWKIFTECFNCLPVAALVDEKILCMHGGLSP
DLHHLDQIRNLHRPTDVPEAGLLCDLLWSDPSRDVRGWGMNDRGVSYTFGPDKVTEYLQK
LDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAVMSVDETLMCSFQILKP
AEKKPKFGFGSTTKNGTSLTKTKSFLGKMG*

Transcript Sequence

Transcript ID

PGSC0003DMT400044371
Transcript Infomation

pacid=37456095 locus=PGSC0003DMG400017227 ID=PGSC0003DMT400044371.v4.03 annot-version=v4.03
Sequence

ATGTCGAGGAAGAAGGTTATGGATTCTTTTTCTTTAGATGATATAATCAACCGTTTACTT
GAAGTTCGTAATCGACCAGGGAAACAAGTTCAGCTATCTGAGGCTGAAATTAGGTATCTT
TGTCTTGAGTCTAAAGAAATTTTCTTGAAGCAGCCTAATCTTCTTGAGTTGGATGCACCA
ATAAAGATCTGTGGGGATATTCATGGTCAGTATTCTGATCTACTGAGGTTATTCGAATAT
GGTGGATTACCTCCTAGATCCAATTACCTATTCTTGGGCGATTATGTGGATCGTGGGAAG
CAAAGTCTGGAAACAATATGCCTTATGTTTGCATATAAAATAAAGTATCCCGAGAACTTT
TTCCTTTTGAGGGGAAATCATGAATGTGCTTCCATTAATCGTATATATGGATTCTATGAT
GAGTGCAAGCGAAGATTCAATGTTCGATTGTGGAAGATATTCACAGAATGTTTTAACTGC
CTGCCTGTGGCAGCTCTGGTTGATGAAAAGATATTGTGCATGCATGGTGGACTCTCCCCC
GACCTTCATCATCTTGATCAGATACGGAACCTCCATCGACCAACTGATGTTCCAGAAGCT
GGACTGCTTTGTGATCTTTTATGGTCAGATCCTAGTAGGGACGTTAGAGGGTGGGGAATG
AATGATAGGGGTGTTTCCTACACATTTGGTCCAGATAAGGTGACAGAGTATCTTCAGAAG
CTAGATCTTGACCTCATTTGCCGTGCCCATCAGGTCGTGGAAGATGGGTACGAGTTTTTC
GCTGACAGACAGCTAGTGACTATATTCTCAGCCCCTAATTATTGTGGAGAGTTTGACAAT
GCTGGTGCCGTGATGAGTGTGGATGAGACACTGATGTGCTCTTTCCAGATATTAAAGCCT
GCAGAGAAGAAGCCTAAGTTTGGATTTGGAAGCACTACTAAAAATGGAACTTCTCTGACC
AAAACTAAGTCATTTCTGGGTAAAATGGGATGA