Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044370
CDS Infomation

pacid=37454971 polypeptide=PGSC0003DMP400030106 locus=PGSC0003DMG400017226 ID=PGSC0003DMT400044370.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGATTTGCAAGTGCTAAATGCACTAGATGTGGCAAAGACACAACTGTATCAC
TTCACAGCAATTGTGATTGCTGGGATGGGGTTTTTTACTGATGCTTATGACCTTTTCTGC
ATTTCTATGGTCACTAAATTGCTTGGTCGTATTTACTACCATCATGACAATGCATTGAAA
CCTGGCTCTCTGCCCCCTAATGTTTCAGCAGCTGTTAATGGAGTCGCCTTCTGTGGCACC
CTTGCTGGACAGTTGTTCTTCGGGTGGCTTGGAGATAAAATGGGAAGGAAGAAAGTCTAT
GGAATGACCCTTATGATTATGGTCATTTGTTCAATTGCCTCGGGGCTTTCATTTGGTCAT
ACACCAAAAAGTGTTATGACTACGCTTTGTTTCTTCAGATTCTGGCTAGGATTTGGCATT
GGTGGTGATTATCCCCTTTCTGCCACCATCATGTCTGAGTACGCTAACAAAAAGACTCGT
GGAGCGTTCATTGCTGCTGTGTTTGCTATGCAAGGTTTCGGAATTCTGGCTGGTGGAATG
GTGGCAATCATTGTTTCTTCAGCATTCAAGGGAGCATTCCCTGCACCAGCATATGAGGTT
GATGCTCTTGCTTCAACAGTTTCTCAGGCTGATTTCGTGTGGCGTATAATTCTCATGTTC
GGTGCAATCCCTGCTGGACTTACTTATTACTGGCGTATGAAGATGCCTGAAACTGCTCGT
TACACTGCCTTGGTCGCCAAGAACTTGAAACAGGCAGCTAACGACATGTCCAAGGTGTTG
CAAGTCGAAATTGAAGCAGAGCCAGAGAAAGTTGCAGCTATTTCTGTAGCAAATGGAGCC
AATGAATTTGGTTTGTTCAGTAAGGAGTTCCTCCGTCGCCATGGACTTCACTTGCTTGGA
ACTGCTAGCACGTGGTTCTTGTTGGACATTGCTTTCTACAGTCAAAACCTTTTCCAGAAG
GACATTTTCAGTGCAATTGGATGGATCCCACCAGCACAAACCATGAACGCGTTGGAAGAA
GTTTACAAGATTGCAAGGGCACAAACTCTTATTGCTCTTTGTAGTACTGTTCCTGGTTAC
TGGTTCACAGTTGCATTCATTGATAGGATTGGTCGATTCGCAATTCAGTTGATGGGATTC
TTCTTCATGACAGTCTTCATGTTTGCCTTAGCCCTTCCATACCATCACTGGACTCTCAAG
GATAACAGAATCGGCTTCGTGGTCATGTACTCACTCACCTTTTTCTTCGCCAACTTTGGT
CCAAACGCCACAACATTCGTCGTCCCTGCTGAGATTTTCCCAGCCAGGCTTAGGTCCACA
TGCCATGGAATATCAGCAGCAGCAGGAAAAGCAGGAGCTATGGTTGGTGCATTCGGATTC
TTGTACGCTGCTCAGCCCACAGATCCAAAAAAGACTGATGCTGGTTACCCTGCTGGCATT
GGTGTGAGGAACTCGTTGATCGTCCTTGGTTGCGTTAACTTCCTTGGTATGTTGTTCACA
TTCTTGGTTCCAGAATCGAAAGGGAAGTCATTGGAAGAAATGTCGAGGGAAAACGAAGGG
GAAGAGGAAACTGTAGCTGAAATGAGAGCAACAAGTGGAAGGACAGTTCCTGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030106
PEP Infomation

pacid=37454971 transcript=PGSC0003DMT400044370 locus=PGSC0003DMG400017226 ID=PGSC0003DMT400044370.v4.03 annot-version=v4.03
Sequence

MANDLQVLNALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISMVTKLLGRIYYHHDNALK
PGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMIMVICSIASGLSFGH
TPKSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGM
VAIIVSSAFKGAFPAPAYEVDALASTVSQADFVWRIILMFGAIPAGLTYYWRMKMPETAR
YTALVAKNLKQAANDMSKVLQVEIEAEPEKVAAISVANGANEFGLFSKEFLRRHGLHLLG
TASTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQTMNALEEVYKIARAQTLIALCSTVPGY
WFTVAFIDRIGRFAIQLMGFFFMTVFMFALALPYHHWTLKDNRIGFVVMYSLTFFFANFG
PNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAAQPTDPKKTDAGYPAGI
GVRNSLIVLGCVNFLGMLFTFLVPESKGKSLEEMSRENEGEEETVAEMRATSGRTVPV*

Transcript Sequence

Transcript ID

PGSC0003DMT400044370
Transcript Infomation

pacid=37454971 locus=PGSC0003DMG400017226 ID=PGSC0003DMT400044370.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGATTTGCAAGTGCTAAATGCACTAGATGTGGCAAAGACACAACTGTATCAC
TTCACAGCAATTGTGATTGCTGGGATGGGGTTTTTTACTGATGCTTATGACCTTTTCTGC
ATTTCTATGGTCACTAAATTGCTTGGTCGTATTTACTACCATCATGACAATGCATTGAAA
CCTGGCTCTCTGCCCCCTAATGTTTCAGCAGCTGTTAATGGAGTCGCCTTCTGTGGCACC
CTTGCTGGACAGTTGTTCTTCGGGTGGCTTGGAGATAAAATGGGAAGGAAGAAAGTCTAT
GGAATGACCCTTATGATTATGGTCATTTGTTCAATTGCCTCGGGGCTTTCATTTGGTCAT
ACACCAAAAAGTGTTATGACTACGCTTTGTTTCTTCAGATTCTGGCTAGGATTTGGCATT
GGTGGTGATTATCCCCTTTCTGCCACCATCATGTCTGAGTACGCTAACAAAAAGACTCGT
GGAGCGTTCATTGCTGCTGTGTTTGCTATGCAAGGTTTCGGAATTCTGGCTGGTGGAATG
GTGGCAATCATTGTTTCTTCAGCATTCAAGGGAGCATTCCCTGCACCAGCATATGAGGTT
GATGCTCTTGCTTCAACAGTTTCTCAGGCTGATTTCGTGTGGCGTATAATTCTCATGTTC
GGTGCAATCCCTGCTGGACTTACTTATTACTGGCGTATGAAGATGCCTGAAACTGCTCGT
TACACTGCCTTGGTCGCCAAGAACTTGAAACAGGCAGCTAACGACATGTCCAAGGTGTTG
CAAGTCGAAATTGAAGCAGAGCCAGAGAAAGTTGCAGCTATTTCTGTAGCAAATGGAGCC
AATGAATTTGGTTTGTTCAGTAAGGAGTTCCTCCGTCGCCATGGACTTCACTTGCTTGGA
ACTGCTAGCACGTGGTTCTTGTTGGACATTGCTTTCTACAGTCAAAACCTTTTCCAGAAG
GACATTTTCAGTGCAATTGGATGGATCCCACCAGCACAAACCATGAACGCGTTGGAAGAA
GTTTACAAGATTGCAAGGGCACAAACTCTTATTGCTCTTTGTAGTACTGTTCCTGGTTAC
TGGTTCACAGTTGCATTCATTGATAGGATTGGTCGATTCGCAATTCAGTTGATGGGATTC
TTCTTCATGACAGTCTTCATGTTTGCCTTAGCCCTTCCATACCATCACTGGACTCTCAAG
GATAACAGAATCGGCTTCGTGGTCATGTACTCACTCACCTTTTTCTTCGCCAACTTTGGT
CCAAACGCCACAACATTCGTCGTCCCTGCTGAGATTTTCCCAGCCAGGCTTAGGTCCACA
TGCCATGGAATATCAGCAGCAGCAGGAAAAGCAGGAGCTATGGTTGGTGCATTCGGATTC
TTGTACGCTGCTCAGCCCACAGATCCAAAAAAGACTGATGCTGGTTACCCTGCTGGCATT
GGTGTGAGGAACTCGTTGATCGTCCTTGGTTGCGTTAACTTCCTTGGTATGTTGTTCACA
TTCTTGGTTCCAGAATCGAAAGGGAAGTCATTGGAAGAAATGTCGAGGGAAAACGAAGGG
GAAGAGGAAACTGTAGCTGAAATGAGAGCAACAAGTGGAAGGACAGTTCCTGTTTAA