Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044336
CDS Infomation

pacid=37455923 polypeptide=PGSC0003DMP400030077 locus=PGSC0003DMG400017216 ID=PGSC0003DMT400044336.v4.03 annot-version=v4.03
Sequence

ATGAAGTCGAGTACTCGACTTGACTCGGTTGTTTTTCAGCTCACTCCTACTAGAACTAGG
TGTGATCTTTTCATTATAGCCAATGACAAGAAAGAGAAAATAGCTTCTGGATTGCTTACT
CCTTTTCTTGCTCACTTGAGAACTGCTCAGGATCAAATTGCCAAGGGTGGTTACTCAATT
TTTCTGGAACCAGATGCTCACGCTGATGATTCGTGGTTTACAAAGGGCACAGTGGAAAGG
TTTGTTCGCTTTGTGAGCAATCCGGAGGTTTTGGAAAGGGTATACACCATTGAATCTGAG
ATCTTGCAGATTGAGGAAGCAATAGCCCTTCAGGGAAACAATGATAGTGGGCAGGGGCCA
ATTGAATACAAAGAAGCTAAACCAGCAGGAAACTTTGCAGGTACTAAATCTACAGCAGAT
GTCAATGAGGAGAAAGCTATTGTTCTTTACAAGCCGGGGGAACATCAACCTCAAACAGAT
TTGCAGGAAGAAAATTCAAGAGTACAGTTTTTGAAGGTCCTGGAGACCCGCAAGTCTGTG
CTTCAAAAAGAACAAGGAATGGCATTTGCTCGTGCTGTAGCTGCTGGTTTTGATATTGAT
CGTATGGCACAGATGGTATCATTTTCCGAATCTTTTGGTGCCTCACGCTTAAGAGATGCA
TGTGTACGATTTATGGAACTGTGGAAGAAAAAGCATGAAAATGGACAATGGGTTGAAATT
GAAGCTGCAGAAGCAATGGCAAATCAATTAGACATTGCTGCAATGAATGCATCTGGAATT
CTCCTCTCTAATATTGCTAATAAGCAGTTTGATTCCAACAGCGAGATGGCTTCTGAGAAT
TATGTGAAATCAAGCACAGATGGTAATTCAGGAGAAAGGCCTCCATTGGATCAACAAAGT
CCAAATGGTCAACAACAATATCAATTTCTGCATCCAATGTATCCACCCTGGCCAATGCAT
TCTCCTTCCTCTGGCGTACCTTCTTTTCAAGGATATCCCATGCAAGGAGTACCTTACTAT
CCAGCTTATCCAGGAAATGGACATCTCTATCGACCTCCTTATCCAGGAATGGAAGACCCT
CGAACGGGTGTCACTCCGCAGAGTAGAAAGAAAAGACAGTCTTCGGATAGGAGAGAGAGC
AACAGTGATTCAGAGGAAGATGAAGAATTGAACAATGAAGGGTCTTATAGTCAGAGAAAG
AAGGCTGGTCGGTCTAGGAAAAATCAATCAGGAAAGGTTGTTATACGTAACATTAATTAT
ATCACTTCTAAAGCAAAGAACTCTAATGATAGCGAATCAGAAGCAGCTTCTGGTTCGGAA
AATGATGCTGATAGTGAAGATCTAGAAGGCAGCGGTCATGACCTGGTGAAAAAGGGAACT
TCACGGTCATCAAAAACAAGACGAAGCCGCACTGAATCAATTTTATATGATGATGACACT
GTTTGTGAGAAGGAAGCTGATGGTGGGCACTGGCTGGCATTTCAAAATTGTTTATTGAAA
GGTAATGAAGATGACAAAGATGGCATGTTCGCAATGGAGAAAGATGCAAGGAGGAGACCA
AAAAGTACCATTTCCAATGATCCTTTGGCTATTGGTGCCCAAGACGGCATTGAAATGAAG
GATAGGTTGAGTGATATGCATACAGTTGGTGCAAAGATATCTCGCATGTCCAGGGGTTCT
AATGGTGAAGTTCTACTTTCTAGCAGAGGATATGACAATGGACAAGGACTTGGTGACCAC
GTGGACATGCAGTTTACTGAGATAAATGGAAGAAAAGTCATGCGTAGAACTGCAAATGAT
GAATTTATGTTGAATGGTCGAGGAAATCAATCAGGGCTGAGAAATTCATTAGATCCAAAT
GCATATGAGCATACTAATAAGCTAGACAAAGCTTCCTCACATGATATGACTGATGAGTCT
TTTGTAGTACCTTTTAGGTCAATGTCATTGAATGACGTTGGACCAGATGGTAGAACTGCC
ATTAACATGGACTCTGAGCTTCCATTGGCGCATCAAAAATCAGAAAACAGCTCTGCTGGA
ATTATGAGCTACGAGCCTAATGATTTTAGCTTGATGTCTGAGCGTGGAACAGAGAAAAGG
TTGGGTGTCTATGACCCTGCTTTAGACTATGAAATGCAAGTTTGCAATGAAGGTTCTGCT
TCAAAGGATAAAAGAAAGAATGGAGTCTCCAATGATGTTAAGGAAGATTCAAAAAAATCA
GAGAAAGATCGCAGGTCAAAAGCTACTGTTGATACTTCGGACAAGAAAAGGAGTGGAGGA
CCAATAAGAAAAGGAAAAATGTCAAAGTCAAGTCCTTTGGATGATGCACGAGCACGTGCT
GAGAGGATAAGATCCTTCAAAGCTGATATGCAGAAGATGAAAAAAGAAAAGGAAGAGGCA
GACCAAAAGCGCATTGAAGCATTAAAACTGGAAAGGCAAAAGAGAATTGCATCCAGAGGT
GGCCCCAGCTCTGGTCACTCTCCAGCACCAACAATCCAAACAAGAAAATTGCCAGCAAAA
AGCTCTCCTGGCACCTTCAGGGGATCTAAGTTCAGTGACTCAGAGCCTGGATCCTTGTCA
CCATTGCAAAGAACCAAAATAAGAACTCCGTTGGGGTCAAATGGTGTGCAAAAGGGCTCT
AAAGCCAGCAAATCAACTGATGGCAGCAAATTGGCTGGTAACAAATTGAGTAGATCAGCA
TCATCCTTGTCTGAACCGAAAAAAGAAAACAATGATGTTACTCCTGATTCAAAGGCATCC
ATGGCACGAATAAGAAGACTATCAGAGCCCAAAGCAATCAGCAGCAAGCCTGGTACCTTA
CGGAAGGCACAAAGTGCTGAACTTGTATCAAAGCCCAAGGCTCGGAGTGCCGAACCAGTG
TCTAAGACAAAGCGCTCTGATGTGCCTGAGAGCAAGAAAATATCTGCCATCATAGACCTT
GACAAAAAGAAGGCTGCAACTCTTCCTGAGCTGAAAATCCGAACCACCAAAGAGTCGTCA
GATTTACTACAAGACAAACCAGCTGCGGAGAACATAGCTATGGAGAAGAATGTTAGGCCT
TCTGTAGCATATGAAGTCATTGAATCATACAAGAATGATCTAGATGAAAACATTATTGAG
AAAACTGTTGTTATGCTTGAGAAGGAGAAGAAGCCCTCTTTGGCTGTTCCCAGTTCATCA
TCAGAGAACTTGGCTATGGCAGAATGTGACAACATTAACAGTGTTGAGAGAACTGACTAT
GCCTCTACACGTGACCCACCGTCACCCTTTGAAGGATTTATTAGAGCACCTGCTCCTAGC
CGACTGCAAGAGCTGTCAAATTCCCATGAGACAGGGACGAATTGTGCAGATGACACACCC
AAGTTTGCAAATATCGGAAGTACTGTTTATCGTGCTCCGTATGCTCGTGTCTCATCTGTA
GAGGACCCTTGTACCAGAAACTTGGAGTTTGCTAAAGCATTCCCATCGAGCTCAGACATA
GGATCAACAGTTAAAGAAATTGCCAAAGCTCATGCACCTGATATTCACACTGTTAGAGTA
GATAACAATCCAGAAGCTGCAGAAAGGACTCAAGTGAAGGAATCACCAAAAGGTTTTAAA
CGCCTCCTGAGGTTTGGAAAGAAGAACCACACCTCTGGAGGAGCAGAATCAAATGGTGCA
AGCATGAATAGCATGAAGCAGGATGATAGTGCCACAAATGCTCCCTTGCCTAGTGAAGTT
TTCACTTTGAAGAATTTGATCTCCCAAGATGAAACCCCAACTGCTGGCAATGTTTCACAG
AAGTCTCGCCTCTCTTTGTTATCTCCCTTTCGAAGCAAGACTAGCGAGAATAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400030077
PEP Infomation

pacid=37455923 transcript=PGSC0003DMT400044336 locus=PGSC0003DMG400017216 ID=PGSC0003DMT400044336.v4.03 annot-version=v4.03
Sequence

MKSSTRLDSVVFQLTPTRTRCDLFIIANDKKEKIASGLLTPFLAHLRTAQDQIAKGGYSI
FLEPDAHADDSWFTKGTVERFVRFVSNPEVLERVYTIESEILQIEEAIALQGNNDSGQGP
IEYKEAKPAGNFAGTKSTADVNEEKAIVLYKPGEHQPQTDLQEENSRVQFLKVLETRKSV
LQKEQGMAFARAVAAGFDIDRMAQMVSFSESFGASRLRDACVRFMELWKKKHENGQWVEI
EAAEAMANQLDIAAMNASGILLSNIANKQFDSNSEMASENYVKSSTDGNSGERPPLDQQS
PNGQQQYQFLHPMYPPWPMHSPSSGVPSFQGYPMQGVPYYPAYPGNGHLYRPPYPGMEDP
RTGVTPQSRKKRQSSDRRESNSDSEEDEELNNEGSYSQRKKAGRSRKNQSGKVVIRNINY
ITSKAKNSNDSESEAASGSENDADSEDLEGSGHDLVKKGTSRSSKTRRSRTESILYDDDT
VCEKEADGGHWLAFQNCLLKGNEDDKDGMFAMEKDARRRPKSTISNDPLAIGAQDGIEMK
DRLSDMHTVGAKISRMSRGSNGEVLLSSRGYDNGQGLGDHVDMQFTEINGRKVMRRTAND
EFMLNGRGNQSGLRNSLDPNAYEHTNKLDKASSHDMTDESFVVPFRSMSLNDVGPDGRTA
INMDSELPLAHQKSENSSAGIMSYEPNDFSLMSERGTEKRLGVYDPALDYEMQVCNEGSA
SKDKRKNGVSNDVKEDSKKSEKDRRSKATVDTSDKKRSGGPIRKGKMSKSSPLDDARARA
ERIRSFKADMQKMKKEKEEADQKRIEALKLERQKRIASRGGPSSGHSPAPTIQTRKLPAK
SSPGTFRGSKFSDSEPGSLSPLQRTKIRTPLGSNGVQKGSKASKSTDGSKLAGNKLSRSA
SSLSEPKKENNDVTPDSKASMARIRRLSEPKAISSKPGTLRKAQSAELVSKPKARSAEPV
SKTKRSDVPESKKISAIIDLDKKKAATLPELKIRTTKESSDLLQDKPAAENIAMEKNVRP
SVAYEVIESYKNDLDENIIEKTVVMLEKEKKPSLAVPSSSSENLAMAECDNINSVERTDY
ASTRDPPSPFEGFIRAPAPSRLQELSNSHETGTNCADDTPKFANIGSTVYRAPYARVSSV
EDPCTRNLEFAKAFPSSSDIGSTVKEIAKAHAPDIHTVRVDNNPEAAERTQVKESPKGFK
RLLRFGKKNHTSGGAESNGASMNSMKQDDSATNAPLPSEVFTLKNLISQDETPTAGNVSQ
KSRLSLLSPFRSKTSENR*

Transcript Sequence

Transcript ID

PGSC0003DMT400044336
Transcript Infomation

pacid=37455923 locus=PGSC0003DMG400017216 ID=PGSC0003DMT400044336.v4.03 annot-version=v4.03
Sequence

ATGAAGTCGAGTACTCGACTTGACTCGGTTGTTTTTCAGCTCACTCCTACTAGAACTAGG
TGTGATCTTTTCATTATAGCCAATGACAAGAAAGAGAAAATAGCTTCTGGATTGCTTACT
CCTTTTCTTGCTCACTTGAGAACTGCTCAGGATCAAATTGCCAAGGGTGGTTACTCAATT
TTTCTGGAACCAGATGCTCACGCTGATGATTCGTGGTTTACAAAGGGCACAGTGGAAAGG
TTTGTTCGCTTTGTGAGCAATCCGGAGGTTTTGGAAAGGGTATACACCATTGAATCTGAG
ATCTTGCAGATTGAGGAAGCAATAGCCCTTCAGGGAAACAATGATAGTGGGCAGGGGCCA
ATTGAATACAAAGAAGCTAAACCAGCAGGAAACTTTGCAGGTACTAAATCTACAGCAGAT
GTCAATGAGGAGAAAGCTATTGTTCTTTACAAGCCGGGGGAACATCAACCTCAAACAGAT
TTGCAGGAAGAAAATTCAAGAGTACAGTTTTTGAAGGTCCTGGAGACCCGCAAGTCTGTG
CTTCAAAAAGAACAAGGAATGGCATTTGCTCGTGCTGTAGCTGCTGGTTTTGATATTGAT
CGTATGGCACAGATGGTATCATTTTCCGAATCTTTTGGTGCCTCACGCTTAAGAGATGCA
TGTGTACGATTTATGGAACTGTGGAAGAAAAAGCATGAAAATGGACAATGGGTTGAAATT
GAAGCTGCAGAAGCAATGGCAAATCAATTAGACATTGCTGCAATGAATGCATCTGGAATT
CTCCTCTCTAATATTGCTAATAAGCAGTTTGATTCCAACAGCGAGATGGCTTCTGAGAAT
TATGTGAAATCAAGCACAGATGGTAATTCAGGAGAAAGGCCTCCATTGGATCAACAAAGT
CCAAATGGTCAACAACAATATCAATTTCTGCATCCAATGTATCCACCCTGGCCAATGCAT
TCTCCTTCCTCTGGCGTACCTTCTTTTCAAGGATATCCCATGCAAGGAGTACCTTACTAT
CCAGCTTATCCAGGAAATGGACATCTCTATCGACCTCCTTATCCAGGAATGGAAGACCCT
CGAACGGGTGTCACTCCGCAGAGTAGAAAGAAAAGACAGTCTTCGGATAGGAGAGAGAGC
AACAGTGATTCAGAGGAAGATGAAGAATTGAACAATGAAGGGTCTTATAGTCAGAGAAAG
AAGGCTGGTCGGTCTAGGAAAAATCAATCAGGAAAGGTTGTTATACGTAACATTAATTAT
ATCACTTCTAAAGCAAAGAACTCTAATGATAGCGAATCAGAAGCAGCTTCTGGTTCGGAA
AATGATGCTGATAGTGAAGATCTAGAAGGCAGCGGTCATGACCTGGTGAAAAAGGGAACT
TCACGGTCATCAAAAACAAGACGAAGCCGCACTGAATCAATTTTATATGATGATGACACT
GTTTGTGAGAAGGAAGCTGATGGTGGGCACTGGCTGGCATTTCAAAATTGTTTATTGAAA
GGTAATGAAGATGACAAAGATGGCATGTTCGCAATGGAGAAAGATGCAAGGAGGAGACCA
AAAAGTACCATTTCCAATGATCCTTTGGCTATTGGTGCCCAAGACGGCATTGAAATGAAG
GATAGGTTGAGTGATATGCATACAGTTGGTGCAAAGATATCTCGCATGTCCAGGGGTTCT
AATGGTGAAGTTCTACTTTCTAGCAGAGGATATGACAATGGACAAGGACTTGGTGACCAC
GTGGACATGCAGTTTACTGAGATAAATGGAAGAAAAGTCATGCGTAGAACTGCAAATGAT
GAATTTATGTTGAATGGTCGAGGAAATCAATCAGGGCTGAGAAATTCATTAGATCCAAAT
GCATATGAGCATACTAATAAGCTAGACAAAGCTTCCTCACATGATATGACTGATGAGTCT
TTTGTAGTACCTTTTAGGTCAATGTCATTGAATGACGTTGGACCAGATGGTAGAACTGCC
ATTAACATGGACTCTGAGCTTCCATTGGCGCATCAAAAATCAGAAAACAGCTCTGCTGGA
ATTATGAGCTACGAGCCTAATGATTTTAGCTTGATGTCTGAGCGTGGAACAGAGAAAAGG
TTGGGTGTCTATGACCCTGCTTTAGACTATGAAATGCAAGTTTGCAATGAAGGTTCTGCT
TCAAAGGATAAAAGAAAGAATGGAGTCTCCAATGATGTTAAGGAAGATTCAAAAAAATCA
GAGAAAGATCGCAGGTCAAAAGCTACTGTTGATACTTCGGACAAGAAAAGGAGTGGAGGA
CCAATAAGAAAAGGAAAAATGTCAAAGTCAAGTCCTTTGGATGATGCACGAGCACGTGCT
GAGAGGATAAGATCCTTCAAAGCTGATATGCAGAAGATGAAAAAAGAAAAGGAAGAGGCA
GACCAAAAGCGCATTGAAGCATTAAAACTGGAAAGGCAAAAGAGAATTGCATCCAGAGGT
GGCCCCAGCTCTGGTCACTCTCCAGCACCAACAATCCAAACAAGAAAATTGCCAGCAAAA
AGCTCTCCTGGCACCTTCAGGGGATCTAAGTTCAGTGACTCAGAGCCTGGATCCTTGTCA
CCATTGCAAAGAACCAAAATAAGAACTCCGTTGGGGTCAAATGGTGTGCAAAAGGGCTCT
AAAGCCAGCAAATCAACTGATGGCAGCAAATTGGCTGGTAACAAATTGAGTAGATCAGCA
TCATCCTTGTCTGAACCGAAAAAAGAAAACAATGATGTTACTCCTGATTCAAAGGCATCC
ATGGCACGAATAAGAAGACTATCAGAGCCCAAAGCAATCAGCAGCAAGCCTGGTACCTTA
CGGAAGGCACAAAGTGCTGAACTTGTATCAAAGCCCAAGGCTCGGAGTGCCGAACCAGTG
TCTAAGACAAAGCGCTCTGATGTGCCTGAGAGCAAGAAAATATCTGCCATCATAGACCTT
GACAAAAAGAAGGCTGCAACTCTTCCTGAGCTGAAAATCCGAACCACCAAAGAGTCGTCA
GATTTACTACAAGACAAACCAGCTGCGGAGAACATAGCTATGGAGAAGAATGTTAGGCCT
TCTGTAGCATATGAAGTCATTGAATCATACAAGAATGATCTAGATGAAAACATTATTGAG
AAAACTGTTGTTATGCTTGAGAAGGAGAAGAAGCCCTCTTTGGCTGTTCCCAGTTCATCA
TCAGAGAACTTGGCTATGGCAGAATGTGACAACATTAACAGTGTTGAGAGAACTGACTAT
GCCTCTACACGTGACCCACCGTCACCCTTTGAAGGATTTATTAGAGCACCTGCTCCTAGC
CGACTGCAAGAGCTGTCAAATTCCCATGAGACAGGGACGAATTGTGCAGATGACACACCC
AAGTTTGCAAATATCGGAAGTACTGTTTATCGTGCTCCGTATGCTCGTGTCTCATCTGTA
GAGGACCCTTGTACCAGAAACTTGGAGTTTGCTAAAGCATTCCCATCGAGCTCAGACATA
GGATCAACAGTTAAAGAAATTGCCAAAGCTCATGCACCTGATATTCACACTGTTAGAGTA
GATAACAATCCAGAAGCTGCAGAAAGGACTCAAGTGAAGGAATCACCAAAAGGTTTTAAA
CGCCTCCTGAGGTTTGGAAAGAAGAACCACACCTCTGGAGGAGCAGAATCAAATGGTGCA
AGCATGAATAGCATGAAGCAGGATGATAGTGCCACAAATGCTCCCTTGCCTAGTGAAGTT
TTCACTTTGAAGAATTTGATCTCCCAAGATGAAACCCCAACTGCTGGCAATGTTTCACAG
AAGTCTCGCCTCTCTTTGTTATCTCCCTTTCGAAGCAAGACTAGCGAGAATAGGTGA