Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044334
CDS Infomation

pacid=37455466 polypeptide=PGSC0003DMP400030075 locus=PGSC0003DMG400017215 ID=PGSC0003DMT400044334.v4.03 annot-version=v4.03
Sequence

ATGTCCCTCTCTCGTCTTCTTTCACTCAAATTGCGACCGTTAATCAACACAGTAGAATGT
AGAAGATGGTGTTCTTCCGTGAATGGTAAGGGTGAAATTTCACAGCCGTTGAAGAAATCA
GAAGTGGTGGAGCAGCTGAAAGCCACGGATGTGGAGATAGCTGAAAAGAAGCTTATGACT
GAAAATGAAGAGGTCTTTCCTAGAGAAACACCTGTCCAGAAGGAAGTAGATCCGTGGAAT
AGTTTGGTAGCGACCTTTCAAATAGCTAAAAAGAAGATATTTGGAAATATTTTGGAGCAG
AAGAGCAGTAGCGCTCATTCATTAACTTCCACTTCCGATCTTAAGGATTCTGATAATGTT
GTATCTGCTTATAGTCATGATAGTGGAAGTATGAATAATCTTAAGAGTACAATTCATTCA
GAAAAGACATCTATAACTACTATGGAAGAAAATGTTGACAGTAAAACATCTCTGTCTTCT
TTTATAGCTGCTGAGATTGTTAATATGAAAAACACTTCAAATACAGCTGTGACTGAGGAA
TTGCTAAATATCTCTTCAAAAGAATGTGAAGGAAGCACTGATTACGGGGTAAATGATATG
TCTTCTGGTGCATCATCTATCTGTGGAAAAGCCGATTCCAACGATGGTGTTCAACCGATT
AATGATTTCCATCTTTCAGAGTTAGTTAAGAAAGAGAGAGAACAATTGCTAGATGAGGAA
GCATCATCAAGTGTACAAATCAGTTCTGGTGAAGAGATCCTGTCAAAATCTGAGAATGCA
TGTATCGTAGAACATCGGATGCAGATTGAGATACCTAGGACATCACATAGAATTTCTGCA
AATAAATCTGGTTCACCTGCATCTGAAAGCCAGGAGGAGGACATTATGAAGAAGTTCAAA
TTTTCGTCAAATTTAAAACATGGACGGAAGGATACCTCTGATTCATCATGTGTCGCAAAG
AGGGTTGCCAGCTTAGTAGATGCTTCTCAGGAAAAAGGAAATAATGAACCAGAGTTGGAG
GCTAAGAATGGCCAAATGCAAAATGAGGAAGTAATATCAGACATTATGTCAGTTTTTGGG
AAAAGAACATCCAATCTCAAGCAGGTCGAATGTTCTAATAGTATCTTACTGAGTGAAACA
ACCAACAAATGGCGGGATGTTCTTGTAAAAAAACCAGTTTCCTCTGCAAACGAACATTAT
CCAGCTAAAGACATCTCTATTCCGATCTCACTTTCTAATACCAAAATGGATGAAATTTCA
TCAGTTTCCCCTGCAAATGAACATTTTCCAGCCAAAGACATCTCTATTCCGATCTCACTT
TCTAATACCAAAATGGACGAAATTTCATCAGTCTCCAATAGGTCTTCTCACATGGAGGCC
AATCATCGAGCAATCAATCAGATTGTTGCCCCAAAGAGTGAAAAATCTGTACCTAGAGAG
TTTGAGCACCTTAATGAAACTTCTCAGAATACTTTCGGCAAGAGTGGCGACATAAAGGGC
TTAATAGAATGTATTAGGGTGCTCCCTCCTCAGAATCATTCTGTTGTTAGGCCTGAGGAA
ATTGTTGTTGACAGAAGTGTTGACAGATATAGTGAAAGAAAGGCAAGTAACAGCACCCAA
GCACAAACTAACAAGCAGTCAACTGACAGGAAAAAAAGAAAGACTTCATCTCAGGGTGTG
ATTGGAAAGAAGGGTGGGATATCTAGCGAAGTCGTTGAAGATCTCAACCCGGGTGATGAA
AGAACAGAGATCAGGAATACTGCACCTCGTGATTTCTTCAAGTCAATAGAAACTGAAGAG
ATTACATCTTTGAGGGAAAAGGGTAACCTGAACAAGGATGAGGATGCCTCTTTATCTGAA
AACTTATCAGATGAAAACAAAATGACTATAAAGTTTGTGAATGTAAAAGCTACAGAACAG
GATGTCTGTGACGGTTTCAAGGGTTGTGGGGCTATTACAAAGGTTGTGTTTCCAAGTGTC
ATATCAACTAATTATAAAGTTGCACACATTTATTTTGAGTCTAAAAAAGGAAAGCAAAAG
GCTCTTAAATGGTCTGATACGGTCATTAGGAATGTAGTAGTTGTGGAGGCCACTTTTCCT
CCGAAAGGGAGAGAGAGGATGTGTATACCTGATTTAATTGGTCATCCAGAAGTTCCCACC
TCATTAGTAAAGCATCCTTCAAGGACAGTTATGATAAAAGAATTGAAGCACAATGTGTCC
TTTCATGACATCGAAGAAGTTCTTGCCTTTTGCGGAAGCAACATAACTGGAATTTTCTTT
GGTTCGTCAAGCTCCGTTGCTTATGTGGAATTTGAGACAGTAGAGGGCAAAGAAATTGCT
ATTGCGAAACATTCATTGATCATGCTTGGAGAGACACTATCAATCTTGCGAATCGATGCA
CCAAGAACAACCATTGTAAGGATATCAAATATCCCTGTCACTTCCAGGGCCAAAGTGATC
TCCTTTTGCAAAAAACTGGGACAGACTAGGTACTTCTTCACGAAAGCTTTTGGCGTCATG
GACGTGCATTTCAAATTTGCTGAATGGCCACGAATGTTAGAGATTATAAACAGGCTGAAC
GGAATTGAAGTAGATGGTCAGCAGTTGGTAGCTAAGCCTGCACCGATCTATCCCCCAGAT
GTCCTTAAGGTTCTCTGGAGTCAACCAGAGGGGAGAAAGCATTTGAAAACCACATTCAAC
AGCTTGCTGCAGAAAGTAGGAGGAGGGAGTACAGTTGGTTTAACAGAACTTGTAGATAAA
TTTTATGCTGATGTACAAGAAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400030075
PEP Infomation

pacid=37455466 transcript=PGSC0003DMT400044334 locus=PGSC0003DMG400017215 ID=PGSC0003DMT400044334.v4.03 annot-version=v4.03
Sequence

MSLSRLLSLKLRPLINTVECRRWCSSVNGKGEISQPLKKSEVVEQLKATDVEIAEKKLMT
ENEEVFPRETPVQKEVDPWNSLVATFQIAKKKIFGNILEQKSSSAHSLTSTSDLKDSDNV
VSAYSHDSGSMNNLKSTIHSEKTSITTMEENVDSKTSLSSFIAAEIVNMKNTSNTAVTEE
LLNISSKECEGSTDYGVNDMSSGASSICGKADSNDGVQPINDFHLSELVKKEREQLLDEE
ASSSVQISSGEEILSKSENACIVEHRMQIEIPRTSHRISANKSGSPASESQEEDIMKKFK
FSSNLKHGRKDTSDSSCVAKRVASLVDASQEKGNNEPELEAKNGQMQNEEVISDIMSVFG
KRTSNLKQVECSNSILLSETTNKWRDVLVKKPVSSANEHYPAKDISIPISLSNTKMDEIS
SVSPANEHFPAKDISIPISLSNTKMDEISSVSNRSSHMEANHRAINQIVAPKSEKSVPRE
FEHLNETSQNTFGKSGDIKGLIECIRVLPPQNHSVVRPEEIVVDRSVDRYSERKASNSTQ
AQTNKQSTDRKKRKTSSQGVIGKKGGISSEVVEDLNPGDERTEIRNTAPRDFFKSIETEE
ITSLREKGNLNKDEDASLSENLSDENKMTIKFVNVKATEQDVCDGFKGCGAITKVVFPSV
ISTNYKVAHIYFESKKGKQKALKWSDTVIRNVVVVEATFPPKGRERMCIPDLIGHPEVPT
SLVKHPSRTVMIKELKHNVSFHDIEEVLAFCGSNITGIFFGSSSSVAYVEFETVEGKEIA
IAKHSLIMLGETLSILRIDAPRTTIVRISNIPVTSRAKVISFCKKLGQTRYFFTKAFGVM
DVHFKFAEWPRMLEIINRLNGIEVDGQQLVAKPAPIYPPDVLKVLWSQPEGRKHLKTTFN
SLLQKVGGGSTVGLTELVDKFYADVQET*

Transcript Sequence

Transcript ID

PGSC0003DMT400044334
Transcript Infomation

pacid=37455466 locus=PGSC0003DMG400017215 ID=PGSC0003DMT400044334.v4.03 annot-version=v4.03
Sequence

ATGTCCCTCTCTCGTCTTCTTTCACTCAAATTGCGACCGTTAATCAACACAGTAGAATGT
AGAAGATGGTGTTCTTCCGTGAATGGTAAGGGTGAAATTTCACAGCCGTTGAAGAAATCA
GAAGTGGTGGAGCAGCTGAAAGCCACGGATGTGGAGATAGCTGAAAAGAAGCTTATGACT
GAAAATGAAGAGGTCTTTCCTAGAGAAACACCTGTCCAGAAGGAAGTAGATCCGTGGAAT
AGTTTGGTAGCGACCTTTCAAATAGCTAAAAAGAAGATATTTGGAAATATTTTGGAGCAG
AAGAGCAGTAGCGCTCATTCATTAACTTCCACTTCCGATCTTAAGGATTCTGATAATGTT
GTATCTGCTTATAGTCATGATAGTGGAAGTATGAATAATCTTAAGAGTACAATTCATTCA
GAAAAGACATCTATAACTACTATGGAAGAAAATGTTGACAGTAAAACATCTCTGTCTTCT
TTTATAGCTGCTGAGATTGTTAATATGAAAAACACTTCAAATACAGCTGTGACTGAGGAA
TTGCTAAATATCTCTTCAAAAGAATGTGAAGGAAGCACTGATTACGGGGTAAATGATATG
TCTTCTGGTGCATCATCTATCTGTGGAAAAGCCGATTCCAACGATGGTGTTCAACCGATT
AATGATTTCCATCTTTCAGAGTTAGTTAAGAAAGAGAGAGAACAATTGCTAGATGAGGAA
GCATCATCAAGTGTACAAATCAGTTCTGGTGAAGAGATCCTGTCAAAATCTGAGAATGCA
TGTATCGTAGAACATCGGATGCAGATTGAGATACCTAGGACATCACATAGAATTTCTGCA
AATAAATCTGGTTCACCTGCATCTGAAAGCCAGGAGGAGGACATTATGAAGAAGTTCAAA
TTTTCGTCAAATTTAAAACATGGACGGAAGGATACCTCTGATTCATCATGTGTCGCAAAG
AGGGTTGCCAGCTTAGTAGATGCTTCTCAGGAAAAAGGAAATAATGAACCAGAGTTGGAG
GCTAAGAATGGCCAAATGCAAAATGAGGAAGTAATATCAGACATTATGTCAGTTTTTGGG
AAAAGAACATCCAATCTCAAGCAGGTCGAATGTTCTAATAGTATCTTACTGAGTGAAACA
ACCAACAAATGGCGGGATGTTCTTGTAAAAAAACCAGTTTCCTCTGCAAACGAACATTAT
CCAGCTAAAGACATCTCTATTCCGATCTCACTTTCTAATACCAAAATGGATGAAATTTCA
TCAGTTTCCCCTGCAAATGAACATTTTCCAGCCAAAGACATCTCTATTCCGATCTCACTT
TCTAATACCAAAATGGACGAAATTTCATCAGTCTCCAATAGGTCTTCTCACATGGAGGCC
AATCATCGAGCAATCAATCAGATTGTTGCCCCAAAGAGTGAAAAATCTGTACCTAGAGAG
TTTGAGCACCTTAATGAAACTTCTCAGAATACTTTCGGCAAGAGTGGCGACATAAAGGGC
TTAATAGAATGTATTAGGGTGCTCCCTCCTCAGAATCATTCTGTTGTTAGGCCTGAGGAA
ATTGTTGTTGACAGAAGTGTTGACAGATATAGTGAAAGAAAGGCAAGTAACAGCACCCAA
GCACAAACTAACAAGCAGTCAACTGACAGGAAAAAAAGAAAGACTTCATCTCAGGGTGTG
ATTGGAAAGAAGGGTGGGATATCTAGCGAAGTCGTTGAAGATCTCAACCCGGGTGATGAA
AGAACAGAGATCAGGAATACTGCACCTCGTGATTTCTTCAAGTCAATAGAAACTGAAGAG
ATTACATCTTTGAGGGAAAAGGGTAACCTGAACAAGGATGAGGATGCCTCTTTATCTGAA
AACTTATCAGATGAAAACAAAATGACTATAAAGTTTGTGAATGTAAAAGCTACAGAACAG
GATGTCTGTGACGGTTTCAAGGGTTGTGGGGCTATTACAAAGGTTGTGTTTCCAAGTGTC
ATATCAACTAATTATAAAGTTGCACACATTTATTTTGAGTCTAAAAAAGGAAAGCAAAAG
GCTCTTAAATGGTCTGATACGGTCATTAGGAATGTAGTAGTTGTGGAGGCCACTTTTCCT
CCGAAAGGGAGAGAGAGGATGTGTATACCTGATTTAATTGGTCATCCAGAAGTTCCCACC
TCATTAGTAAAGCATCCTTCAAGGACAGTTATGATAAAAGAATTGAAGCACAATGTGTCC
TTTCATGACATCGAAGAAGTTCTTGCCTTTTGCGGAAGCAACATAACTGGAATTTTCTTT
GGTTCGTCAAGCTCCGTTGCTTATGTGGAATTTGAGACAGTAGAGGGCAAAGAAATTGCT
ATTGCGAAACATTCATTGATCATGCTTGGAGAGACACTATCAATCTTGCGAATCGATGCA
CCAAGAACAACCATTGTAAGGATATCAAATATCCCTGTCACTTCCAGGGCCAAAGTGATC
TCCTTTTGCAAAAAACTGGGACAGACTAGGTACTTCTTCACGAAAGCTTTTGGCGTCATG
GACGTGCATTTCAAATTTGCTGAATGGCCACGAATGTTAGAGATTATAAACAGGCTGAAC
GGAATTGAAGTAGATGGTCAGCAGTTGGTAGCTAAGCCTGCACCGATCTATCCCCCAGAT
GTCCTTAAGGTTCTCTGGAGTCAACCAGAGGGGAGAAAGCATTTGAAAACCACATTCAAC
AGCTTGCTGCAGAAAGTAGGAGGAGGGAGTACAGTTGGTTTAACAGAACTTGTAGATAAA
TTTTATGCTGATGTACAAGAAACATAA