Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044326
CDS Infomation

pacid=37458508 polypeptide=PGSC0003DMP400030070 locus=PGSC0003DMG400017211 ID=PGSC0003DMT400044326.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAAGGCTCATCCTTTACTTAGAGGAGGAAGAAGAGAAACAAAATATAGCCAT
GGATTTTCTTCATCAGAAATAGAAACTTTAACATCTATTTGTGAAACAATTCTTCCCCCT
CTTCCTCTAAATTCACTTCAAGAAAATAACAAAAAAATTCAAAACTTTCATAAAGTTTCT
GGCTCTCAATATCCAATTCCTGATGAGGTTGCTGAGATTGTGATGAAAAGGGCTTTTTTT
GAAGCAAGAATGTTGGTGAGGGGTTTGTTAAGAATTCTATCAACAAGAATTGGGAGTTTG
TTACTTTGTGGATTATTTTGTTTTGGAAAAAGTTGGCCTTATATTAACAAATTCTCTGAT
ATTTCATTGGATAAAAGAGAAATTGTGATGCAAAAATGGTTCAACAACAGATTTTTTACT
CCTGTTAGATTGGCATTTGTGTTTGTCAAATTCTTGTGTCTATACATCTTCTTTACTCAG
GTTGGTGAAGATTCAAAAAATCCAGCATGGGATGACATTGGATATCAAGTAGACAATGAA
GAGAACTCTTCAGAAACACCTGATGAGAGACCTCTTCAGAAGGGAATCATCGAAACTATA
TACGAGACAGAATCAACCATTGTAAAATCCCTTGTCGAAAAAGGCCTAAAAGTCACAGAA
GACACAAAAAACAACATGTACAAGGTTCAATGTGATGTTGTCATTGTTGGTTCAGGCTGT
GGTGGAGGTGTTGCAGCAAGTGTTCTTGCAAGTTCTGGCCAGAAAGTCGTTGTTCTCGAG
AAAGGAAACTACTTCGCGAAATCAGACTATTCTTCCCTTGAAGGACCTTCACAGTCTCAA
ATGTATGAATCAGGAGGTATATTCTCAACTTTGGATGGTAAAGTTATGATCTTGGCAGGT
TCAACAGTTGGTGGTGGCTCTGCTGTTAACTGGTCAGCTTGCATTAAGACCCCTGACTCC
ATTATACAAGAATGGGGCGATGATAAAAGAATCTCCATGTTCAAAACCCCTGAGTATGTA
TCAGCTATGGACAAAGTTTGTGAACGAATCAACGTGACAGAGAAATGCACACAAGAAGGT
CTACAGAATCAGATTCTCCAAAAAGGGTGTGAAAGACTTGGTCTTGAAGTTGAAGGCGTG
GCAAGAAACTCATCCGAGGATCATTATTGTGGCTCGTGTTGTTACGGATGTAGAAGAGGT
GAGAAGAAAGGAACTGATACAACTTGGCTAGTCGATGCTGTGGACTGTGGAGCAGTGATT
ATAACAGGATGCAAAGCCGAGAGATTCATACTCGAAAATAAAAAGTATGGGAAAACAAGA
AGCAAGAAATGCTTAGGAGTGATTTCAACTAGTATGAATAAGGATATCACAAAGAGTATA
TGTATTGAGGCAAAAGTAACCATTTCAGCTTGTGGTTCTCTTTTGACCCCTCCACTTATG
ATCTCTAGTGGATTGAAAAATCGAAACATTGGTAGAAATCTCCATCTTCATCCAGTCATA
ATGGCGTGGGGGTACTTCCCTGAGTCCAACTCTGATCTCAAGGGAAAAATATACGAAGGA
GGAATCATTACCTCGGTACACAAAGTGGGGAGTCATGATTCGAATGTAAGAGCTATTATA
GAAGCTCCTGCTTTAGGACCGGGATCATTTGCTGCTTTATGTCCTTGGACATCAGGAGAG
GACATAAAGAATAGATTACTCAAGTATGACAGAACAGCTCATTTATTTGCAATGGTTAAA
GATGTTGGATCGGGGGAAGTTAGGTCCGAAGGAAGAATTAACTACACGTTCAATGGCACG
GACAAAGAAAGTTTGAAACTCGGGCTAAGACAAGCTTTAAGGATCTTGATAGCAGCAGGA
GCTGCTGAGGTAGGTACTCAACGTAGCGATGGACAGAGAATCAAATGTAAAGGACAAAGT
GAAAAAGCACTCGAGTCTTTTCTTGATACAGTCACAGCAGCTGAGGGACCAAAGTCACTT
GTAAAGGATTTCACAACTTATTGTTCTGCTCATCAAATGGGGAGCTGCAGGATGGGAATG
AACGAAAAGGACAGTGCAGTCGATGAGAACGGGGAGAGTTGGGAAGCAGAAGGACTATTT
GTTTGTGATGCTAGTGTTCTTCCAGGCGCTGTTGGTGTAAATCCAATGATCACTATACAG
TCTACTGCATATTGCCTATCCAAGAAGATAGCAGAGATGATAAAAGATGGAAGGTTCTCA
AGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400030070
PEP Infomation

pacid=37458508 transcript=PGSC0003DMT400044326 locus=PGSC0003DMG400017211 ID=PGSC0003DMT400044326.v4.03 annot-version=v4.03
Sequence

MEKKAHPLLRGGRRETKYSHGFSSSEIETLTSICETILPPLPLNSLQENNKKIQNFHKVS
GSQYPIPDEVAEIVMKRAFFEARMLVRGLLRILSTRIGSLLLCGLFCFGKSWPYINKFSD
ISLDKREIVMQKWFNNRFFTPVRLAFVFVKFLCLYIFFTQVGEDSKNPAWDDIGYQVDNE
ENSSETPDERPLQKGIIETIYETESTIVKSLVEKGLKVTEDTKNNMYKVQCDVVIVGSGC
GGGVAASVLASSGQKVVVLEKGNYFAKSDYSSLEGPSQSQMYESGGIFSTLDGKVMILAG
STVGGGSAVNWSACIKTPDSIIQEWGDDKRISMFKTPEYVSAMDKVCERINVTEKCTQEG
LQNQILQKGCERLGLEVEGVARNSSEDHYCGSCCYGCRRGEKKGTDTTWLVDAVDCGAVI
ITGCKAERFILENKKYGKTRSKKCLGVISTSMNKDITKSICIEAKVTISACGSLLTPPLM
ISSGLKNRNIGRNLHLHPVIMAWGYFPESNSDLKGKIYEGGIITSVHKVGSHDSNVRAII
EAPALGPGSFAALCPWTSGEDIKNRLLKYDRTAHLFAMVKDVGSGEVRSEGRINYTFNGT
DKESLKLGLRQALRILIAAGAAEVGTQRSDGQRIKCKGQSEKALESFLDTVTAAEGPKSL
VKDFTTYCSAHQMGSCRMGMNEKDSAVDENGESWEAEGLFVCDASVLPGAVGVNPMITIQ
STAYCLSKKIAEMIKDGRFSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400044326
Transcript Infomation

pacid=37458508 locus=PGSC0003DMG400017211 ID=PGSC0003DMT400044326.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAAAGGCTCATCCTTTACTTAGAGGAGGAAGAAGAGAAACAAAATATAGCCAT
GGATTTTCTTCATCAGAAATAGAAACTTTAACATCTATTTGTGAAACAATTCTTCCCCCT
CTTCCTCTAAATTCACTTCAAGAAAATAACAAAAAAATTCAAAACTTTCATAAAGTTTCT
GGCTCTCAATATCCAATTCCTGATGAGGTTGCTGAGATTGTGATGAAAAGGGCTTTTTTT
GAAGCAAGAATGTTGGTGAGGGGTTTGTTAAGAATTCTATCAACAAGAATTGGGAGTTTG
TTACTTTGTGGATTATTTTGTTTTGGAAAAAGTTGGCCTTATATTAACAAATTCTCTGAT
ATTTCATTGGATAAAAGAGAAATTGTGATGCAAAAATGGTTCAACAACAGATTTTTTACT
CCTGTTAGATTGGCATTTGTGTTTGTCAAATTCTTGTGTCTATACATCTTCTTTACTCAG
GTTGGTGAAGATTCAAAAAATCCAGCATGGGATGACATTGGATATCAAGTAGACAATGAA
GAGAACTCTTCAGAAACACCTGATGAGAGACCTCTTCAGAAGGGAATCATCGAAACTATA
TACGAGACAGAATCAACCATTGTAAAATCCCTTGTCGAAAAAGGCCTAAAAGTCACAGAA
GACACAAAAAACAACATGTACAAGGTTCAATGTGATGTTGTCATTGTTGGTTCAGGCTGT
GGTGGAGGTGTTGCAGCAAGTGTTCTTGCAAGTTCTGGCCAGAAAGTCGTTGTTCTCGAG
AAAGGAAACTACTTCGCGAAATCAGACTATTCTTCCCTTGAAGGACCTTCACAGTCTCAA
ATGTATGAATCAGGAGGTATATTCTCAACTTTGGATGGTAAAGTTATGATCTTGGCAGGT
TCAACAGTTGGTGGTGGCTCTGCTGTTAACTGGTCAGCTTGCATTAAGACCCCTGACTCC
ATTATACAAGAATGGGGCGATGATAAAAGAATCTCCATGTTCAAAACCCCTGAGTATGTA
TCAGCTATGGACAAAGTTTGTGAACGAATCAACGTGACAGAGAAATGCACACAAGAAGGT
CTACAGAATCAGATTCTCCAAAAAGGGTGTGAAAGACTTGGTCTTGAAGTTGAAGGCGTG
GCAAGAAACTCATCCGAGGATCATTATTGTGGCTCGTGTTGTTACGGATGTAGAAGAGGT
GAGAAGAAAGGAACTGATACAACTTGGCTAGTCGATGCTGTGGACTGTGGAGCAGTGATT
ATAACAGGATGCAAAGCCGAGAGATTCATACTCGAAAATAAAAAGTATGGGAAAACAAGA
AGCAAGAAATGCTTAGGAGTGATTTCAACTAGTATGAATAAGGATATCACAAAGAGTATA
TGTATTGAGGCAAAAGTAACCATTTCAGCTTGTGGTTCTCTTTTGACCCCTCCACTTATG
ATCTCTAGTGGATTGAAAAATCGAAACATTGGTAGAAATCTCCATCTTCATCCAGTCATA
ATGGCGTGGGGGTACTTCCCTGAGTCCAACTCTGATCTCAAGGGAAAAATATACGAAGGA
GGAATCATTACCTCGGTACACAAAGTGGGGAGTCATGATTCGAATGTAAGAGCTATTATA
GAAGCTCCTGCTTTAGGACCGGGATCATTTGCTGCTTTATGTCCTTGGACATCAGGAGAG
GACATAAAGAATAGATTACTCAAGTATGACAGAACAGCTCATTTATTTGCAATGGTTAAA
GATGTTGGATCGGGGGAAGTTAGGTCCGAAGGAAGAATTAACTACACGTTCAATGGCACG
GACAAAGAAAGTTTGAAACTCGGGCTAAGACAAGCTTTAAGGATCTTGATAGCAGCAGGA
GCTGCTGAGGTAGGTACTCAACGTAGCGATGGACAGAGAATCAAATGTAAAGGACAAAGT
GAAAAAGCACTCGAGTCTTTTCTTGATACAGTCACAGCAGCTGAGGGACCAAAGTCACTT
GTAAAGGATTTCACAACTTATTGTTCTGCTCATCAAATGGGGAGCTGCAGGATGGGAATG
AACGAAAAGGACAGTGCAGTCGATGAGAACGGGGAGAGTTGGGAAGCAGAAGGACTATTT
GTTTGTGATGCTAGTGTTCTTCCAGGCGCTGTTGGTGTAAATCCAATGATCACTATACAG
TCTACTGCATATTGCCTATCCAAGAAGATAGCAGAGATGATAAAAGATGGAAGGTTCTCA
AGATAA