Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044313
CDS Infomation

pacid=37455771 polypeptide=PGSC0003DMP400030058 locus=PGSC0003DMG404017205 ID=PGSC0003DMT400044313.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGCTGCTATAACCAAAGCAATATCAAAAATCACAGAACAAGCAATATTCCTA
TATGGACTGAATGAACAAGTAAGAGAACTTGTTACAGAGCTGGGACGTATGCGAGCATTC
TTGAAAGACGTTGATACAAGAAAACAGAAAGGAGAAAGAGTAAAAAATTGGGCTGATGAA
ATTAGAGACCTTGCACAAGATGCTGAGGGCGTAGTTGAGAAGTTTGCTGCTGAGGTAATA
CAGAGATCAAACGAGGAAGACACTGTTTATTGTTTCTGTACAATGTTATCTAATGTTGTG
AAAGAGGTTATTCCAAGGTACAAAATAGGGTGGGATATAGGAAAGATCAACAAGAGATTA
AAAAGCCTCACAGAAAGTTTAACAACTTATGGTGTAGTTTTGCCTGATACAAATGAAGAA
GAAACATCTATTACTAGAGAAGTGAAATTACAGAGTGGAGCTATTGGTGTTGAGAGATGG
GGAGGTTCTGGAGGAAGTCATTGGAATTATAGGCCTAAAGGTGTAGTGAAACAGATAGTT
GTAAAGCATGGATTGATTATAGATTCTATAATGTTTAAGAGCAGTGAAGAAAATGGTGTC
ATGGAATCTAAAACATTTGGTGGTTCTGGAGGCCATCTCACAACTGAGATCAATATAGAC
AGTCCTTCAGAGTATTTGACAGGCTTAAGTGGGACATATGGACTCTATGGTCCCTATCTT
ATAATAAAATCCATCAAGTTACACACTAACCTTAGCCATCATGGCCCTATGGGTTCAGTA
ATTGAAACTGATACCAACTTCTCATTTATTATGCAAGGTGGGGTTGTTGTTGGATTCCAT
GGATTTTCAGGTTTATTTCTTGATGCCGTTGGTTTGTATGTTATGCCAACAAGTATAACT
TTACCTTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030058
PEP Infomation

pacid=37455771 transcript=PGSC0003DMT400044313 locus=PGSC0003DMG404017205 ID=PGSC0003DMT400044313.v4.03 annot-version=v4.03
Sequence

MAEAAITKAISKITEQAIFLYGLNEQVRELVTELGRMRAFLKDVDTRKQKGERVKNWADE
IRDLAQDAEGVVEKFAAEVIQRSNEEDTVYCFCTMLSNVVKEVIPRYKIGWDIGKINKRL
KSLTESLTTYGVVLPDTNEEETSITREVKLQSGAIGVERWGGSGGSHWNYRPKGVVKQIV
VKHGLIIDSIMFKSSEENGVMESKTFGGSGGHLTTEINIDSPSEYLTGLSGTYGLYGPYL
IIKSIKLHTNLSHHGPMGSVIETDTNFSFIMQGGVVVGFHGFSGLFLDAVGLYVMPTSIT
LPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400044313
Transcript Infomation

pacid=37455771 locus=PGSC0003DMG404017205 ID=PGSC0003DMT400044313.v4.03 annot-version=v4.03
Sequence

ATGGCTGAGGCTGCTATAACCAAAGCAATATCAAAAATCACAGAACAAGCAATATTCCTA
TATGGACTGAATGAACAAGTAAGAGAACTTGTTACAGAGCTGGGACGTATGCGAGCATTC
TTGAAAGACGTTGATACAAGAAAACAGAAAGGAGAAAGAGTAAAAAATTGGGCTGATGAA
ATTAGAGACCTTGCACAAGATGCTGAGGGCGTAGTTGAGAAGTTTGCTGCTGAGGTAATA
CAGAGATCAAACGAGGAAGACACTGTTTATTGTTTCTGTACAATGTTATCTAATGTTGTG
AAAGAGGTTATTCCAAGGTACAAAATAGGGTGGGATATAGGAAAGATCAACAAGAGATTA
AAAAGCCTCACAGAAAGTTTAACAACTTATGGTGTAGTTTTGCCTGATACAAATGAAGAA
GAAACATCTATTACTAGAGAAGTGAAATTACAGAGTGGAGCTATTGGTGTTGAGAGATGG
GGAGGTTCTGGAGGAAGTCATTGGAATTATAGGCCTAAAGGTGTAGTGAAACAGATAGTT
GTAAAGCATGGATTGATTATAGATTCTATAATGTTTAAGAGCAGTGAAGAAAATGGTGTC
ATGGAATCTAAAACATTTGGTGGTTCTGGAGGCCATCTCACAACTGAGATCAATATAGAC
AGTCCTTCAGAGTATTTGACAGGCTTAAGTGGGACATATGGACTCTATGGTCCCTATCTT
ATAATAAAATCCATCAAGTTACACACTAACCTTAGCCATCATGGCCCTATGGGTTCAGTA
ATTGAAACTGATACCAACTTCTCATTTATTATGCAAGGTGGGGTTGTTGTTGGATTCCAT
GGATTTTCAGGTTTATTTCTTGATGCCGTTGGTTTGTATGTTATGCCAACAAGTATAACT
TTACCTTCTTAG