Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044306
CDS Infomation

pacid=37458001 polypeptide=PGSC0003DMP400030052 locus=PGSC0003DMG400017204 ID=PGSC0003DMT400044306.v4.03 annot-version=v4.03
Sequence

ATGACAACTTCTCAATATGTGGATGAAAATGGACAAGACGATGGATACACAAAAGATGGA
ACTGTGGATCTCAAAGGCAATCCTATACTTAGATCCAATACTGGTGGATGGAAAGCTTGT
TCCTTCATTGTTGTATATGAAGTTTTCGAACGTATGGCATATTATGGTATATCATCAAAC
TTGGTAATATATTTAACAGAGAAATTGCATCAAGGCACTGTTAAATCATCAAATAATGTC
ACAAATTGGGTTGGAACTGTATGGATGACTCCTATATTGGGCGCCTACTTTGCTGATGCT
CATCTTGGACGTTATTGGACTTTCTTGATTGCATGTGGCATATATCTATTGGGTATGTCA
CTACTAACACTAGCAGTATCAATCAATGGCCTAAAGCCTCCTCATTGTTCCAATCCAAGT
TCAATTGACTGCAAAAAAGCATCCACACTTCAACTAGCTGTGTTCTTTGGTGCACTCTAC
ACCTTAGCCGTCGGCACTGGTGGCACGAAACCCAACATATCGACGATCGGAGCCGATCAA
TTCGACGAATTTCACCCTAGGGAAAAATCCCAAAAACTTTCATTTTTCAATTGGTGGATG
TTCAGCATTTTCCTAGGGACACTCTTTGCTAACACTGTGCTTGTATACATTCAAGACAAT
GTGGGCTGGTCACTTGGATATGGGCTTCCAACATTGGGCCTTGCTATATCTATAGTGATA
TTTTTGGCTGGATCATCTTTTTATAGACATAAAAAGCCCAGAGGAAGCCCATTTACAAGA
ATGGCTAAAGTCATTATTGCTTCATTAAGGAAATGGAAGATTAAAGTCCCTAATGACCCA
AAAGAGTTCTATGAACTTGATTTGGGAGAATATACCAAAAATGGAAAAGTTAGAATTGAC
TCCACTCCTACTTTGAGGTTTTTGAACAAAGCTTGTGTTAAAGTTGATACAACTAATCCA
TGGATGTTATGTTCAGTTACACAAGTAGAAGAGACTAAGCAAATGCTAAGGATGATACCA
ATTTTGATTGCTACATTCATTCCAAGTACAATGTTAGCTCAAATCAATACACTTTTTGTC
AAACAAGGCACAACTCTTCAGAGAAACATTGGTAGTTTCAGCATCCCTCCAGCTAGTCTA
AGTGGATTCGTTACAATATCGATGCTAGTCTCCGTTGTGTTATATGATCGTTTCTTCATG
AAAATTGCCAAAAGATTGACGAAAAATCCAAGAGGTGTAAACATACTTCAGAGGATGGGA
ATTGGAATGGCTTTCCATATTGTGATCATGTTAGTTGCATCGTTCATTGAGAGGTATAGG
CTTAGTGTAGCAAGGGATCATGGACTAGTCGAAAATGGTAAACAAGTACCGTTATCCATT
TTGATTTTGTTGCCTCAATTCATTCTTATGGGAACTGCTGATGCATTCTTGGAAGTAGCC
AAGATTGAGTTTTTTTATGATCAAGCACCAGAAGGCATGAAGAGTCTTGGAACTTCTTAT
TCAATGACTAGTCTTGGTGTTGGGAGTTTCATTAGCAGCTTCTTGCTTTCGACAGTTTCT
CATATCACCAAGAAGCACGGGAATCACAGAGGATGGATATTAAACAACCTGAATGCATCT
CATCTTGACTATTACTACGCGTTCTTCGCGATACTCAACTTATTGAACTTCTTCTTTTTC
CTGTTTGTGAGCAAGTTTTATGAATACAAAGCTGAAGTCTCTGATTCACTGTCTGTGTTA
AGGCAAGAATTGGAGATCGAATCGAGACATCGGGTGACTAATAGCCAAGAAGCTTCAACC
AACACACAGGTGAATGGTTCTACATAG

Peptide Sequence

PEP ID

PGSC0003DMP400030052
PEP Infomation

pacid=37458001 transcript=PGSC0003DMT400044306 locus=PGSC0003DMG400017204 ID=PGSC0003DMT400044306.v4.03 annot-version=v4.03
Sequence

MTTSQYVDENGQDDGYTKDGTVDLKGNPILRSNTGGWKACSFIVVYEVFERMAYYGISSN
LVIYLTEKLHQGTVKSSNNVTNWVGTVWMTPILGAYFADAHLGRYWTFLIACGIYLLGMS
LLTLAVSINGLKPPHCSNPSSIDCKKASTLQLAVFFGALYTLAVGTGGTKPNISTIGADQ
FDEFHPREKSQKLSFFNWWMFSIFLGTLFANTVLVYIQDNVGWSLGYGLPTLGLAISIVI
FLAGSSFYRHKKPRGSPFTRMAKVIIASLRKWKIKVPNDPKEFYELDLGEYTKNGKVRID
STPTLRFLNKACVKVDTTNPWMLCSVTQVEETKQMLRMIPILIATFIPSTMLAQINTLFV
KQGTTLQRNIGSFSIPPASLSGFVTISMLVSVVLYDRFFMKIAKRLTKNPRGVNILQRMG
IGMAFHIVIMLVASFIERYRLSVARDHGLVENGKQVPLSILILLPQFILMGTADAFLEVA
KIEFFYDQAPEGMKSLGTSYSMTSLGVGSFISSFLLSTVSHITKKHGNHRGWILNNLNAS
HLDYYYAFFAILNLLNFFFFLFVSKFYEYKAEVSDSLSVLRQELEIESRHRVTNSQEAST
NTQVNGST*

Transcript Sequence

Transcript ID

PGSC0003DMT400044306
Transcript Infomation

pacid=37458001 locus=PGSC0003DMG400017204 ID=PGSC0003DMT400044306.v4.03 annot-version=v4.03
Sequence

ATGACAACTTCTCAATATGTGGATGAAAATGGACAAGACGATGGATACACAAAAGATGGA
ACTGTGGATCTCAAAGGCAATCCTATACTTAGATCCAATACTGGTGGATGGAAAGCTTGT
TCCTTCATTGTTGTATATGAAGTTTTCGAACGTATGGCATATTATGGTATATCATCAAAC
TTGGTAATATATTTAACAGAGAAATTGCATCAAGGCACTGTTAAATCATCAAATAATGTC
ACAAATTGGGTTGGAACTGTATGGATGACTCCTATATTGGGCGCCTACTTTGCTGATGCT
CATCTTGGACGTTATTGGACTTTCTTGATTGCATGTGGCATATATCTATTGGGTATGTCA
CTACTAACACTAGCAGTATCAATCAATGGCCTAAAGCCTCCTCATTGTTCCAATCCAAGT
TCAATTGACTGCAAAAAAGCATCCACACTTCAACTAGCTGTGTTCTTTGGTGCACTCTAC
ACCTTAGCCGTCGGCACTGGTGGCACGAAACCCAACATATCGACGATCGGAGCCGATCAA
TTCGACGAATTTCACCCTAGGGAAAAATCCCAAAAACTTTCATTTTTCAATTGGTGGATG
TTCAGCATTTTCCTAGGGACACTCTTTGCTAACACTGTGCTTGTATACATTCAAGACAAT
GTGGGCTGGTCACTTGGATATGGGCTTCCAACATTGGGCCTTGCTATATCTATAGTGATA
TTTTTGGCTGGATCATCTTTTTATAGACATAAAAAGCCCAGAGGAAGCCCATTTACAAGA
ATGGCTAAAGTCATTATTGCTTCATTAAGGAAATGGAAGATTAAAGTCCCTAATGACCCA
AAAGAGTTCTATGAACTTGATTTGGGAGAATATACCAAAAATGGAAAAGTTAGAATTGAC
TCCACTCCTACTTTGAGGTTTTTGAACAAAGCTTGTGTTAAAGTTGATACAACTAATCCA
TGGATGTTATGTTCAGTTACACAAGTAGAAGAGACTAAGCAAATGCTAAGGATGATACCA
ATTTTGATTGCTACATTCATTCCAAGTACAATGTTAGCTCAAATCAATACACTTTTTGTC
AAACAAGGCACAACTCTTCAGAGAAACATTGGTAGTTTCAGCATCCCTCCAGCTAGTCTA
AGTGGATTCGTTACAATATCGATGCTAGTCTCCGTTGTGTTATATGATCGTTTCTTCATG
AAAATTGCCAAAAGATTGACGAAAAATCCAAGAGGTGTAAACATACTTCAGAGGATGGGA
ATTGGAATGGCTTTCCATATTGTGATCATGTTAGTTGCATCGTTCATTGAGAGGTATAGG
CTTAGTGTAGCAAGGGATCATGGACTAGTCGAAAATGGTAAACAAGTACCGTTATCCATT
TTGATTTTGTTGCCTCAATTCATTCTTATGGGAACTGCTGATGCATTCTTGGAAGTAGCC
AAGATTGAGTTTTTTTATGATCAAGCACCAGAAGGCATGAAGAGTCTTGGAACTTCTTAT
TCAATGACTAGTCTTGGTGTTGGGAGTTTCATTAGCAGCTTCTTGCTTTCGACAGTTTCT
CATATCACCAAGAAGCACGGGAATCACAGAGGATGGATATTAAACAACCTGAATGCATCT
CATCTTGACTATTACTACGCGTTCTTCGCGATACTCAACTTATTGAACTTCTTCTTTTTC
CTGTTTGTGAGCAAGTTTTATGAATACAAAGCTGAAGTCTCTGATTCACTGTCTGTGTTA
AGGCAAGAATTGGAGATCGAATCGAGACATCGGGTGACTAATAGCCAAGAAGCTTCAACC
AACACACAGGTGAATGGTTCTACATAG