Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044305
CDS Infomation

pacid=37456361 polypeptide=PGSC0003DMP400030051 locus=PGSC0003DMG400017203 ID=PGSC0003DMT400044305.v4.03 annot-version=v4.03
Sequence

ATGCCTTTGTTCTTCAAGATTTCCCTCTTCTTCTTCTATTTCTTCTTTGTTATTTCATCC
TCCCCTCTTGAATACAACCACCCATTGGAGTCTCTTGCTCTGTTTGAACTCACTCAAGTA
ACAAACATAGTCAAAAATTCCTATTTTCCCCTCAATGTAACCTTTCATTATGTTGGCTTA
AATGAACCAAACAAACAATTAGTCCTGTCATGGCTATCATCCACTCATCATCCTGCTCTA
CCTCGCGAAGCTATTGTTATTACTCGAATTGATCAAAAAACGCATGAAATCATCGTAGAC
TTATCGAGTGTTTCAATTTTATCAGATAAAATCTATAATGGACATGGCTACCCCATGCTT
ACTTTACAAGAGCAAACAGCTGCCGATGAGTTACCATTATCGTATCCACCATTTATATCA
TCCATTAAAAAGAGAAGGCTAAAGCTAAAAGAAGTCGTGTGCCAAGGCTTCGCGGTTGGA
TGGTATGGAGAGAAAAGGAAGAGTACTAACAGAATGGTTAAAGTCATGTGTTATTACTTA
GATGGAACAGTTAATCTTTATATGAGACCTATTGAAGGAATTACAATTACTGTTCTTCTT
GATCAAATGACAATCGCGAGTTATATTGATCGTTTGATTGTTCCTGTCCCTAAAGCTAAT
GGGACAGATTACATGGGATCAAAGCGGCGGAGATCATCTCATGAATCAAATTCAATAAAA
ATAGTGCAGCCTGATGGACCAAGTTTTACTCTAGACAATGGAAACACAGTGTGGTGGGGT
GACTGGAAGTTCCACGTAGCGTATGACATGAGAGCAGGAATGATCATATCACTAGCATCG
ATCTTTGATGCTGAGAAGGAGGAATTTCGGAGTGTAATGTACAGAGGATTTGTGTCTGAA
GTTTTTGTGCCATACATAGATTTAACTGAAGAATGGTACTATAGGACTTATTTCGATGCA
GGTGAATATGGATTTGGTCTATGTGCGGTAGAGCTTGAAGCATCAAAGGATTGTCCAGAG
AACGCGAAGTTTATTGATGGCTACTTCATTTCACAAGATGGTACTCCAGGAAAAATGCCT
AATGTAATTTGTATATTCGAACGTTATGCTGGAGATATCATGTGGCGCCATACAGAGCTT
GCAATTCCTGGAAAAGTTATACGAAAGGTTAGACCGGAGGTGAGCCTGGTGGTGAGAATG
GTATCGACTGTAGGGAATTATGATTACATTACTGACTATGAATTCAAACAAAGTGGCACC
ATCAAAGTCACGGTTGGGTTAACTGGTCTACTTGAAGTAAGGGGATCTATATATACTCAC
AATGACCAGATAAAAGAGGAAGTGTATGGTACACTAATAGCAGAAAACACATTAGGTGCA
TATCATGATCATTTCTTTACCTATCACCTCGATTTAGACATAGACGGTCATGAAAATTCC
TTTGTGAAAAATAACTTAAAAACTAGACGCGTGGTCAATAAAAGTTCACCAAGAAAGAGT
TATTGGGCAGTTGTTAGTGAAACAGCTGAAACAGAATCAGATGCAAGGATTCAGCTAGGT
TCATCACGAGGCGCCCTTGAAATGGTAGTGGTGAACCCCAACAAGAAGACTGAGGTTGGG
AATGAAATAGGCTACTGTCTGATCCCGGGAGGATCTGCAACAAATCCTTTGTTAAGTGAC
GATGATTATCCACAGATCCGCGGAGGTTTTACCAAGTACAATGTGTGGGTGACACCTTAT
AACAAGTCTGAGAAATGGGCAGGAGGATTATATACTGATCAAAGCCATGGGGATGATACA
TTAGCCATGTGGAGCCTCAGGGATAGGGAAATCAAGAACAAGGATATTGTATTATGGTAC
ACATTTGGTGTTCATCATGTACCCAAACAAGAAGATTTTCCAATTATGCCAACATTAAGC
ACTGGTTTTGAGCTCAAGCCTACTAATTTCTTTCAGCATAATCCAGTTCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400030051
PEP Infomation

pacid=37456361 transcript=PGSC0003DMT400044305 locus=PGSC0003DMG400017203 ID=PGSC0003DMT400044305.v4.03 annot-version=v4.03
Sequence

MPLFFKISLFFFYFFFVISSSPLEYNHPLESLALFELTQVTNIVKNSYFPLNVTFHYVGL
NEPNKQLVLSWLSSTHHPALPREAIVITRIDQKTHEIIVDLSSVSILSDKIYNGHGYPML
TLQEQTAADELPLSYPPFISSIKKRRLKLKEVVCQGFAVGWYGEKRKSTNRMVKVMCYYL
DGTVNLYMRPIEGITITVLLDQMTIASYIDRLIVPVPKANGTDYMGSKRRRSSHESNSIK
IVQPDGPSFTLDNGNTVWWGDWKFHVAYDMRAGMIISLASIFDAEKEEFRSVMYRGFVSE
VFVPYIDLTEEWYYRTYFDAGEYGFGLCAVELEASKDCPENAKFIDGYFISQDGTPGKMP
NVICIFERYAGDIMWRHTELAIPGKVIRKVRPEVSLVVRMVSTVGNYDYITDYEFKQSGT
IKVTVGLTGLLEVRGSIYTHNDQIKEEVYGTLIAENTLGAYHDHFFTYHLDLDIDGHENS
FVKNNLKTRRVVNKSSPRKSYWAVVSETAETESDARIQLGSSRGALEMVVVNPNKKTEVG
NEIGYCLIPGGSATNPLLSDDDYPQIRGGFTKYNVWVTPYNKSEKWAGGLYTDQSHGDDT
LAMWSLRDREIKNKDIVLWYTFGVHHVPKQEDFPIMPTLSTGFELKPTNFFQHNPVL*

Transcript Sequence

Transcript ID

PGSC0003DMT400044305
Transcript Infomation

pacid=37456361 locus=PGSC0003DMG400017203 ID=PGSC0003DMT400044305.v4.03 annot-version=v4.03
Sequence

ATGCCTTTGTTCTTCAAGATTTCCCTCTTCTTCTTCTATTTCTTCTTTGTTATTTCATCC
TCCCCTCTTGAATACAACCACCCATTGGAGTCTCTTGCTCTGTTTGAACTCACTCAAGTA
ACAAACATAGTCAAAAATTCCTATTTTCCCCTCAATGTAACCTTTCATTATGTTGGCTTA
AATGAACCAAACAAACAATTAGTCCTGTCATGGCTATCATCCACTCATCATCCTGCTCTA
CCTCGCGAAGCTATTGTTATTACTCGAATTGATCAAAAAACGCATGAAATCATCGTAGAC
TTATCGAGTGTTTCAATTTTATCAGATAAAATCTATAATGGACATGGCTACCCCATGCTT
ACTTTACAAGAGCAAACAGCTGCCGATGAGTTACCATTATCGTATCCACCATTTATATCA
TCCATTAAAAAGAGAAGGCTAAAGCTAAAAGAAGTCGTGTGCCAAGGCTTCGCGGTTGGA
TGGTATGGAGAGAAAAGGAAGAGTACTAACAGAATGGTTAAAGTCATGTGTTATTACTTA
GATGGAACAGTTAATCTTTATATGAGACCTATTGAAGGAATTACAATTACTGTTCTTCTT
GATCAAATGACAATCGCGAGTTATATTGATCGTTTGATTGTTCCTGTCCCTAAAGCTAAT
GGGACAGATTACATGGGATCAAAGCGGCGGAGATCATCTCATGAATCAAATTCAATAAAA
ATAGTGCAGCCTGATGGACCAAGTTTTACTCTAGACAATGGAAACACAGTGTGGTGGGGT
GACTGGAAGTTCCACGTAGCGTATGACATGAGAGCAGGAATGATCATATCACTAGCATCG
ATCTTTGATGCTGAGAAGGAGGAATTTCGGAGTGTAATGTACAGAGGATTTGTGTCTGAA
GTTTTTGTGCCATACATAGATTTAACTGAAGAATGGTACTATAGGACTTATTTCGATGCA
GGTGAATATGGATTTGGTCTATGTGCGGTAGAGCTTGAAGCATCAAAGGATTGTCCAGAG
AACGCGAAGTTTATTGATGGCTACTTCATTTCACAAGATGGTACTCCAGGAAAAATGCCT
AATGTAATTTGTATATTCGAACGTTATGCTGGAGATATCATGTGGCGCCATACAGAGCTT
GCAATTCCTGGAAAAGTTATACGAAAGGTTAGACCGGAGGTGAGCCTGGTGGTGAGAATG
GTATCGACTGTAGGGAATTATGATTACATTACTGACTATGAATTCAAACAAAGTGGCACC
ATCAAAGTCACGGTTGGGTTAACTGGTCTACTTGAAGTAAGGGGATCTATATATACTCAC
AATGACCAGATAAAAGAGGAAGTGTATGGTACACTAATAGCAGAAAACACATTAGGTGCA
TATCATGATCATTTCTTTACCTATCACCTCGATTTAGACATAGACGGTCATGAAAATTCC
TTTGTGAAAAATAACTTAAAAACTAGACGCGTGGTCAATAAAAGTTCACCAAGAAAGAGT
TATTGGGCAGTTGTTAGTGAAACAGCTGAAACAGAATCAGATGCAAGGATTCAGCTAGGT
TCATCACGAGGCGCCCTTGAAATGGTAGTGGTGAACCCCAACAAGAAGACTGAGGTTGGG
AATGAAATAGGCTACTGTCTGATCCCGGGAGGATCTGCAACAAATCCTTTGTTAAGTGAC
GATGATTATCCACAGATCCGCGGAGGTTTTACCAAGTACAATGTGTGGGTGACACCTTAT
AACAAGTCTGAGAAATGGGCAGGAGGATTATATACTGATCAAAGCCATGGGGATGATACA
TTAGCCATGTGGAGCCTCAGGGATAGGGAAATCAAGAACAAGGATATTGTATTATGGTAC
ACATTTGGTGTTCATCATGTACCCAAACAAGAAGATTTTCCAATTATGCCAACATTAAGC
ACTGGTTTTGAGCTCAAGCCTACTAATTTCTTTCAGCATAATCCAGTTCTTTAA