Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044280
CDS Infomation

pacid=37456127 polypeptide=PGSC0003DMP400030035 locus=PGSC0003DMG400017196 ID=PGSC0003DMT400044280.v4.03 annot-version=v4.03
Sequence

ATGAACTGTTCAATTTCCGGCGAGGTGCCGGAGGATCCAGTAGTTTCGAAGAAGTCCGGA
CTCCTTTTCGAAAAGCGTTTAATTGAAAGACATATCTCTGATTATGGCAAATGTCCTATT
ACTGGAGAGCCATTGACGGCAGATGACATTATCCCTGTTAAAACTGGCAAGATAGTTAAA
CCCCGACCTGTACAGGCTGCTAGCATTCCTGGGATGTTGGGAATGTTCCAAATAGAATGG
GATGGCCTGATGCTGTCAAATTTTGCATTGGAACAACAATTACATACTGCAAGGCAAGAG
CTGAGCCATGCTTTATATCAGCATGATGCTGCTTGCAGGGTAATTGCAAGGCTGAAAAAG
GAAAGGGATGAGGCAAGGGGGTTGCTTGCCCAGGCTGAAAGACAAATACCCATGGCAGCC
ACTACAGCAGTTGGTACTACTGCTGTAAGCAATGGGAAAAGAGCTGCTGAGGATGAGGAT
ACGGGCCCTGATGGAAAGAAAATTCGCCCTGGGATATCACACTCTGTCATTGAGACTCTT
ACTGAATGTAATGCTGGTCTTTCACAACAAAGGAAAAAACGACAGATACCGGCAACATTG
GCCCCTGTGGATGCTTTGGCGAGATATACCCAACTGAATAGTTTTCCTCTTCACAAAACC
AACAAACCGGGCATTTTGTCTTTGGATATTCATTATGCTAAGGACATAATTGCTACTGGT
GGAGTTGATTCAAATGCTGTGATCTTTGATCGACCTTCAGGACAGATCATATCAACACTA
AGTGGTCATTCAAAGAGGGTTACCAGTGTTAAATTTGCGGCTGAGGGTGAACTCGTGGTC
TCTGGTTCAGCAGATAAGACGGTTCGTGTGTGGCAAAGTTCTGAAAATGGAAATTATGAC
TGTAGGCATGTCTTGAAGGATCATACAGCAGAGGTGCAAGCTGTCACTGTCCATGCAACC
AATAATTATTTTGTTACTGCTTCTCTTGATAGCACGTGGTGCTTTTATGATCTTGCTTCT
GGTTTATGCCTTGCACAGGTAGCAGATGCTTCAGAATCTGAGGGCTATACTTCCGCAGCT
TTCCACCCTGATGGTCTGATCCTTGGAACTGGGACTTCAGGGTCTCTGGTCAAGATATGG
GATGTAAAAAGTCAGGCAAATGTTGCAAAATTTGATGGCCATGTTGGGTCTGTAACTGCT
ATTTCCTTTTCAGAAAATGGCTATTTCTTAGCAACTGCTGCTCATGATGGTGTTAAACTT
TGGGATTTACGCAAATTGAAGAACTTTAGAACTTTCGCTCCTTATGATGAAAACACACCA
ACTCAATCAGTGGAATTTGACCATAGTGGAAGTTATCTTGCCTTAGGAGGCTCAGATATA
CGAGTTTATCAAGTCGCCAGTGTCAAGGCTGATTGGAATCACATCAAAACCTTCCCTGAC
TTATCAGGCACAGGCAAAGCAACATGTCTGAAATTTGGTCCAGATGCATCGTACATAGCT
GTCGGATCTATGGACCGCAATTTAAGAATATTCGGGCTGCCTGGTGAGGATCAAATGGAG
GGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400030035
PEP Infomation

pacid=37456127 transcript=PGSC0003DMT400044280 locus=PGSC0003DMG400017196 ID=PGSC0003DMT400044280.v4.03 annot-version=v4.03
Sequence

MNCSISGEVPEDPVVSKKSGLLFEKRLIERHISDYGKCPITGEPLTADDIIPVKTGKIVK
PRPVQAASIPGMLGMFQIEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
ERDEARGLLAQAERQIPMAATTAVGTTAVSNGKRAAEDEDTGPDGKKIRPGISHSVIETL
TECNAGLSQQRKKRQIPATLAPVDALARYTQLNSFPLHKTNKPGILSLDIHYAKDIIATG
GVDSNAVIFDRPSGQIISTLSGHSKRVTSVKFAAEGELVVSGSADKTVRVWQSSENGNYD
CRHVLKDHTAEVQAVTVHATNNYFVTASLDSTWCFYDLASGLCLAQVADASESEGYTSAA
FHPDGLILGTGTSGSLVKIWDVKSQANVAKFDGHVGSVTAISFSENGYFLATAAHDGVKL
WDLRKLKNFRTFAPYDENTPTQSVEFDHSGSYLALGGSDIRVYQVASVKADWNHIKTFPD
LSGTGKATCLKFGPDASYIAVGSMDRNLRIFGLPGEDQMEG*

Transcript Sequence

Transcript ID

PGSC0003DMT400044280
Transcript Infomation

pacid=37456127 locus=PGSC0003DMG400017196 ID=PGSC0003DMT400044280.v4.03 annot-version=v4.03
Sequence

ATGAACTGTTCAATTTCCGGCGAGGTGCCGGAGGATCCAGTAGTTTCGAAGAAGTCCGGA
CTCCTTTTCGAAAAGCGTTTAATTGAAAGACATATCTCTGATTATGGCAAATGTCCTATT
ACTGGAGAGCCATTGACGGCAGATGACATTATCCCTGTTAAAACTGGCAAGATAGTTAAA
CCCCGACCTGTACAGGCTGCTAGCATTCCTGGGATGTTGGGAATGTTCCAAATAGAATGG
GATGGCCTGATGCTGTCAAATTTTGCATTGGAACAACAATTACATACTGCAAGGCAAGAG
CTGAGCCATGCTTTATATCAGCATGATGCTGCTTGCAGGGTAATTGCAAGGCTGAAAAAG
GAAAGGGATGAGGCAAGGGGGTTGCTTGCCCAGGCTGAAAGACAAATACCCATGGCAGCC
ACTACAGCAGTTGGTACTACTGCTGTAAGCAATGGGAAAAGAGCTGCTGAGGATGAGGAT
ACGGGCCCTGATGGAAAGAAAATTCGCCCTGGGATATCACACTCTGTCATTGAGACTCTT
ACTGAATGTAATGCTGGTCTTTCACAACAAAGGAAAAAACGACAGATACCGGCAACATTG
GCCCCTGTGGATGCTTTGGCGAGATATACCCAACTGAATAGTTTTCCTCTTCACAAAACC
AACAAACCGGGCATTTTGTCTTTGGATATTCATTATGCTAAGGACATAATTGCTACTGGT
GGAGTTGATTCAAATGCTGTGATCTTTGATCGACCTTCAGGACAGATCATATCAACACTA
AGTGGTCATTCAAAGAGGGTTACCAGTGTTAAATTTGCGGCTGAGGGTGAACTCGTGGTC
TCTGGTTCAGCAGATAAGACGGTTCGTGTGTGGCAAAGTTCTGAAAATGGAAATTATGAC
TGTAGGCATGTCTTGAAGGATCATACAGCAGAGGTGCAAGCTGTCACTGTCCATGCAACC
AATAATTATTTTGTTACTGCTTCTCTTGATAGCACGTGGTGCTTTTATGATCTTGCTTCT
GGTTTATGCCTTGCACAGGTAGCAGATGCTTCAGAATCTGAGGGCTATACTTCCGCAGCT
TTCCACCCTGATGGTCTGATCCTTGGAACTGGGACTTCAGGGTCTCTGGTCAAGATATGG
GATGTAAAAAGTCAGGCAAATGTTGCAAAATTTGATGGCCATGTTGGGTCTGTAACTGCT
ATTTCCTTTTCAGAAAATGGCTATTTCTTAGCAACTGCTGCTCATGATGGTGTTAAACTT
TGGGATTTACGCAAATTGAAGAACTTTAGAACTTTCGCTCCTTATGATGAAAACACACCA
ACTCAATCAGTGGAATTTGACCATAGTGGAAGTTATCTTGCCTTAGGAGGCTCAGATATA
CGAGTTTATCAAGTCGCCAGTGTCAAGGCTGATTGGAATCACATCAAAACCTTCCCTGAC
TTATCAGGCACAGGCAAAGCAACATGTCTGAAATTTGGTCCAGATGCATCGTACATAGCT
GTCGGATCTATGGACCGCAATTTAAGAATATTCGGGCTGCCTGGTGAGGATCAAATGGAG
GGTTAG