Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044270
CDS Infomation

pacid=37455521 polypeptide=PGSC0003DMP400030027 locus=PGSC0003DMG401017193 ID=PGSC0003DMT400044270.v4.03 annot-version=v4.03
Sequence

ATGGCGGCACCCCAAATCGATTTCAACAGTGAAAATCAAGAACCAAAATCAAAGATTGTG
TATTTAAACTACAGGCGAATGCCAGCAGCAATCTTTCGGAAGAAGTATTGGGATTGGAAT
AGCATGGTGTCGGTATGTAAACTTACAATGGTTGGAAACTTCTTTATACCTAAACCAAAG
ATGACTAAAATTCGTGTTAGTTTCCAGGCGAAACTCTCTCTTAAAGGGGTAGTGAAAATT
AGGTCTTATGATTCTTACCATGTATTTCTTGATTTCACTGCTGAAGAGGATTATCAATCT
GTTTTGTTGAAAGAGAGGGTTGTTGTTGCTGGTGCAATCATGGAGGTTTTTCGGTGGACG
CCCGAGTTTCATGATCAATTTAGAGAAGCATTTGGTGTTGTGGAGCTAGATAATACCAAA
AGAGATGAACATATTGGTGGTGGAAATGAGTACGGGACAGAGGAGTCTGATTCAGTAGAT
TGTGTCCCAGAAGTAACTAATTCTGATTCTGAGGACAGAGTTGCAAGTCCTATCAAGTGT
GAAACCTCTAAATTACCTTCTTCCGTGGGAATTAGTTGCAGTGGGTTTAGTGGCCTTTCA
TCTGCTCCATACAGAATTACTGGAAGAATTCCTTCTGTTACATATGAAAATTCAACGATG
TGTTCCACAGACTTGGTTCCTATAAGGGGGACTTATTTGAACCACAATAATCTAAAGTCA
TATAGCAGAGAGTGGAATTATGGAAGTAAGCCAACTAGTGAAGCAGCTGATTTGGCTTGT
GAAACACTTAGTCAGCCATTATATGCTCTTTCAATTGTCGAGCGCCATGAGAATCAGAAA
TCAAGACCTCCAATCAAAGTGCAACATTCGACCTATATGGGATACCCAACAGTAAACTTT
CCAAGGAGCTATGGTGAAAGCTTAGTATCTGATTATAAGCTCACTTTGCTTGGGAATTTC
TCCTATAAGAGGCCAAAAATGAAAGAAATTCGGGCTGATTTCAAAGCACAGAACCCTTTG
AATGGCCAAGTAAAGATTAGGAATTGTTCTTCTCGGCAAGTATTGATTTTATTCACCAAT
GAAGAGGATTACTACACTGTTTTGTACAAGAAAGCGTTCATTGTTGCTGGTGCCCTCATG
CAGATTTCCTGGTCGTCTCCAGATTTCCACCATGAAGTAAAACAGAATATTTATCCTGAT
TTCAGATTAAGTGATGCAAAATCTGTTAATTGGAATACAGACCCCTCTAAGCTGCATCCT
TCTATAAATGGCCTTTCAGCCCCTGCTACAGATGAAAAGCCCATGTCACTACAAGTGCCT
GCCGTGTCTCAATGCTTGAGTGTTCCTTCAATACGTCCACCATTACCATTATTGGCTCAT
TCAGTAAGTGTAGCTGGTCGATTGTGTGCTGATCGTTTAACAACTTCAGGTATTTATGTT
CCTCAGTCTTATCCGAAAGGAATTTTGGGCAGTCCTATTTTTGGAAGAAATGAACAAGCG
GGCCGTGGAAGCACCTTTCCCAGCCCTAGCCAAGCCCTGGATCAGAGCAGTCTTGCTCAG
CAGCATAATCAACTCAATTCATATAAGGAACCAAAAATGACTGTCAGGATAGCACAATCA
CAACCACCATCAACAACCTCAGTAAGTGACACTACCAGCTCAATTCGATACCGAGAATGT
CTCAAGAATCATGCTGCAAGCATGGGAGGACATGCTCTCGATGGATGTGGAGAATTCATG
CCTAGTGGAGAAGAAGGGACCCCAGGAGCCCTGAAATGTGCAGCTTGTAATTGCCACCAA
AATTTTCACAGGAAAGAGATTGACGATTACCAACAGATGGATGATGTTGGGTCACATTCT
AGGTTCAGTCAACCGAGAAATAATAGCAGTAGTGGCAGTATACAAAACCAATCCCCGATT
TCTCTTCCTACACAGCAGCTGCAGCAGTATCATCATGATTACAGTAATAGCTGTTCACCT
AGATCATTGGTTGACTCTTTGCAGCCTTATACTCAACCACCCTCGCCTACATCTGGTTCT
GTATTTTCACAACAGGCCTGGGAAAGAATAGAACCTAGTTCTATTCGACCAAGCTATTCA
TATGAAATGGTGAATCACAATACCATGCAGAATGGAAAGCAACGGGAATATTCCTGGAGT
GACAGCAGTAGTAATACATCACGATCACGAGATCATCCTTCCATACGAAATGAAAATTGG
AACTTTGACATGTTCAAGCCTTTAAACAACAGAACCCCTGATCACATTCCATTGGAGTTT
CCAGCCTACCCGTCTAGGTGCCAGCCCCAGACTGTATTTGCTGATGAATTTCCACATCTG
GACATCATTAACAACTTGCTACATGAAGAGCATGGAACTGGACGGACTTTGATGTCCAAC
TCAGGCTTTCAGAGGTTGAACAATGGATCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400030027
PEP Infomation

pacid=37455521 transcript=PGSC0003DMT400044270 locus=PGSC0003DMG401017193 ID=PGSC0003DMT400044270.v4.03 annot-version=v4.03
Sequence

MAAPQIDFNSENQEPKSKIVYLNYRRMPAAIFRKKYWDWNSMVSVCKLTMVGNFFIPKPK
MTKIRVSFQAKLSLKGVVKIRSYDSYHVFLDFTAEEDYQSVLLKERVVVAGAIMEVFRWT
PEFHDQFREAFGVVELDNTKRDEHIGGGNEYGTEESDSVDCVPEVTNSDSEDRVASPIKC
ETSKLPSSVGISCSGFSGLSSAPYRITGRIPSVTYENSTMCSTDLVPIRGTYLNHNNLKS
YSREWNYGSKPTSEAADLACETLSQPLYALSIVERHENQKSRPPIKVQHSTYMGYPTVNF
PRSYGESLVSDYKLTLLGNFSYKRPKMKEIRADFKAQNPLNGQVKIRNCSSRQVLILFTN
EEDYYTVLYKKAFIVAGALMQISWSSPDFHHEVKQNIYPDFRLSDAKSVNWNTDPSKLHP
SINGLSAPATDEKPMSLQVPAVSQCLSVPSIRPPLPLLAHSVSVAGRLCADRLTTSGIYV
PQSYPKGILGSPIFGRNEQAGRGSTFPSPSQALDQSSLAQQHNQLNSYKEPKMTVRIAQS
QPPSTTSVSDTTSSIRYRECLKNHAASMGGHALDGCGEFMPSGEEGTPGALKCAACNCHQ
NFHRKEIDDYQQMDDVGSHSRFSQPRNNSSSGSIQNQSPISLPTQQLQQYHHDYSNSCSP
RSLVDSLQPYTQPPSPTSGSVFSQQAWERIEPSSIRPSYSYEMVNHNTMQNGKQREYSWS
DSSSNTSRSRDHPSIRNENWNFDMFKPLNNRTPDHIPLEFPAYPSRCQPQTVFADEFPHL
DIINNLLHEEHGTGRTLMSNSGFQRLNNGS*

Transcript Sequence

Transcript ID

PGSC0003DMT400044270
Transcript Infomation

pacid=37455521 locus=PGSC0003DMG401017193 ID=PGSC0003DMT400044270.v4.03 annot-version=v4.03
Sequence

ATGGCGGCACCCCAAATCGATTTCAACAGTGAAAATCAAGAACCAAAATCAAAGATTGTG
TATTTAAACTACAGGCGAATGCCAGCAGCAATCTTTCGGAAGAAGTATTGGGATTGGAAT
AGCATGGTGTCGGTATGTAAACTTACAATGGTTGGAAACTTCTTTATACCTAAACCAAAG
ATGACTAAAATTCGTGTTAGTTTCCAGGCGAAACTCTCTCTTAAAGGGGTAGTGAAAATT
AGGTCTTATGATTCTTACCATGTATTTCTTGATTTCACTGCTGAAGAGGATTATCAATCT
GTTTTGTTGAAAGAGAGGGTTGTTGTTGCTGGTGCAATCATGGAGGTTTTTCGGTGGACG
CCCGAGTTTCATGATCAATTTAGAGAAGCATTTGGTGTTGTGGAGCTAGATAATACCAAA
AGAGATGAACATATTGGTGGTGGAAATGAGTACGGGACAGAGGAGTCTGATTCAGTAGAT
TGTGTCCCAGAAGTAACTAATTCTGATTCTGAGGACAGAGTTGCAAGTCCTATCAAGTGT
GAAACCTCTAAATTACCTTCTTCCGTGGGAATTAGTTGCAGTGGGTTTAGTGGCCTTTCA
TCTGCTCCATACAGAATTACTGGAAGAATTCCTTCTGTTACATATGAAAATTCAACGATG
TGTTCCACAGACTTGGTTCCTATAAGGGGGACTTATTTGAACCACAATAATCTAAAGTCA
TATAGCAGAGAGTGGAATTATGGAAGTAAGCCAACTAGTGAAGCAGCTGATTTGGCTTGT
GAAACACTTAGTCAGCCATTATATGCTCTTTCAATTGTCGAGCGCCATGAGAATCAGAAA
TCAAGACCTCCAATCAAAGTGCAACATTCGACCTATATGGGATACCCAACAGTAAACTTT
CCAAGGAGCTATGGTGAAAGCTTAGTATCTGATTATAAGCTCACTTTGCTTGGGAATTTC
TCCTATAAGAGGCCAAAAATGAAAGAAATTCGGGCTGATTTCAAAGCACAGAACCCTTTG
AATGGCCAAGTAAAGATTAGGAATTGTTCTTCTCGGCAAGTATTGATTTTATTCACCAAT
GAAGAGGATTACTACACTGTTTTGTACAAGAAAGCGTTCATTGTTGCTGGTGCCCTCATG
CAGATTTCCTGGTCGTCTCCAGATTTCCACCATGAAGTAAAACAGAATATTTATCCTGAT
TTCAGATTAAGTGATGCAAAATCTGTTAATTGGAATACAGACCCCTCTAAGCTGCATCCT
TCTATAAATGGCCTTTCAGCCCCTGCTACAGATGAAAAGCCCATGTCACTACAAGTGCCT
GCCGTGTCTCAATGCTTGAGTGTTCCTTCAATACGTCCACCATTACCATTATTGGCTCAT
TCAGTAAGTGTAGCTGGTCGATTGTGTGCTGATCGTTTAACAACTTCAGGTATTTATGTT
CCTCAGTCTTATCCGAAAGGAATTTTGGGCAGTCCTATTTTTGGAAGAAATGAACAAGCG
GGCCGTGGAAGCACCTTTCCCAGCCCTAGCCAAGCCCTGGATCAGAGCAGTCTTGCTCAG
CAGCATAATCAACTCAATTCATATAAGGAACCAAAAATGACTGTCAGGATAGCACAATCA
CAACCACCATCAACAACCTCAGTAAGTGACACTACCAGCTCAATTCGATACCGAGAATGT
CTCAAGAATCATGCTGCAAGCATGGGAGGACATGCTCTCGATGGATGTGGAGAATTCATG
CCTAGTGGAGAAGAAGGGACCCCAGGAGCCCTGAAATGTGCAGCTTGTAATTGCCACCAA
AATTTTCACAGGAAAGAGATTGACGATTACCAACAGATGGATGATGTTGGGTCACATTCT
AGGTTCAGTCAACCGAGAAATAATAGCAGTAGTGGCAGTATACAAAACCAATCCCCGATT
TCTCTTCCTACACAGCAGCTGCAGCAGTATCATCATGATTACAGTAATAGCTGTTCACCT
AGATCATTGGTTGACTCTTTGCAGCCTTATACTCAACCACCCTCGCCTACATCTGGTTCT
GTATTTTCACAACAGGCCTGGGAAAGAATAGAACCTAGTTCTATTCGACCAAGCTATTCA
TATGAAATGGTGAATCACAATACCATGCAGAATGGAAAGCAACGGGAATATTCCTGGAGT
GACAGCAGTAGTAATACATCACGATCACGAGATCATCCTTCCATACGAAATGAAAATTGG
AACTTTGACATGTTCAAGCCTTTAAACAACAGAACCCCTGATCACATTCCATTGGAGTTT
CCAGCCTACCCGTCTAGGTGCCAGCCCCAGACTGTATTTGCTGATGAATTTCCACATCTG
GACATCATTAACAACTTGCTACATGAAGAGCATGGAACTGGACGGACTTTGATGTCCAAC
TCAGGCTTTCAGAGGTTGAACAATGGATCATAA