Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044244
CDS Infomation

pacid=37455480 polypeptide=PGSC0003DMP400030005 locus=PGSC0003DMG400017186 ID=PGSC0003DMT400044244.v4.03 annot-version=v4.03
Sequence

ATGTTGAAGAAAGTAGTATCATGGTTGTTGTTTTTATCGATCGTTGAATTATGGGTTGTT
GATGGTTATATTGAATGTCCTTGTGATGATAGTGATGCATTTTGGAGCATGGAAACAATG
TTATTTGTTCAAAAGGCCGGTGATCTCGGTATAGCAGTGGCCTATTTTTCCATCCCAATC
GAGATCATCTACTTCGTTACCTGTTCTAGTTTTCCGTTCAAATGGGTGCTCTTTCAATTC
GGAGCATTCATTGTACTATGTGGTTTAACACATTTTCTCACCTTCTTGACTCATTTTGGC
AAATACACATTTCACCTTATTCTTGCCCTTATTGTTTGCAAACTACTCACTGCATTAGTT
TCGATGCTCACTGCTATAACACTTATGAATCTCATCCCTTTGCTGCTTAAAGCCAAGGCA
AGGGAATTTATGCTGAGACGAAAGAATCGTGATCTTGATCGAGAAGTTGGAAGAATAAAA
CAAAAGGAGGAACTTGGACTGCATGTTCGGATGCTTACCAAAGAGATCCGGAAGTCAATT
GATCGTCATACAATACTCTACACAACTCTTGTTGAGCTATCGAAGTTATTGAGTTTGCAG
AATTGTGTTATATGGATGCCTAATGAGAACAGAACCGAGATGAAACTGACTCATGATACT
ACAAGGGAAAATGTTTCGAGTATGTATAATGTGCCTATCCCGATCAGTGATCAAGAAGTA
AAAGAGATCAAGGGGAGTGATGATGTAAAGATACTTGGAGCGGGCTCCCGACTTGCTGCT
GCAAGCAGTAGAGGGAGTTGTGAGCCAGAAACTGTGGCTGCTATTAGGATTCCAATGCTG
ATGGTCTCGAATTTCGGAGGTGAAACTCATGAGATTGTCTCGCAATGTTATGCTATCCTC
GTTTTGGTTCAACCTAGTGGACATGGTAGGTTTTGGCTTAACCAGGAAATTGAGATAGTC
ACGGCTGCAGCTGATCAAGTTGCTGTGGCGTTGTCCCATGCTGCAGTGGTTGAAGAATCT
GAGTATATCAAAGACAGATTGACAGAACAGAATCAAGCACTGCAAAAAGCGAGAGAGGAA
GCTCTTAGAGCAAGTCAAGCTAGGAGTGCATTTCAGACGGTTATGAGCCATCGGTTGAGA
AGACCGATGCACTCAATTTTGGGTCTGCTCTCGATGTTGCAGGAAGAGAAGTTACGAGAT
GAACAACAGCTTCTTGTGCATTCTATAATCAAATCCAGCAACGTTGTCTCCACCCTGATG
GATGATGTTATAGTTACTTCAACCAAGGAGAACGTAAAATTCCCATTGGAAATGAAGCAT
TTTCAGCTACATTCCTTGATACGAGAAGCTGCTTGTATCGCCAAATCTTTGTGTATGTAT
AAGGGTTACAACATTACCATTGAGGTTGAAAAATCATTTCCTAATCAAGTCATGGGTGAT
GAAAGAAGATTTTTTCAAGTTTTGCTTCATATAATCGGAAATCTTTTGAATGGCACCAAC
GGAGGACATCTTACCTTCAGAGCTCTCTCAGCAAGTGAAAATGATGTAAGTTGGAAAACG
CCGAGATCAAACTCATCTAATGACATTGTCTATATCAAGTTTGAAATTTGCACAAAAATT
AATCGATCTGAGTCAGAGATCACCCCTGCTACTCCGACGTACTACATTGAGGAGATTGAG
GAGAGTTTGAGCTTTGCTGTTTGCAGGAAGTTGGTTCATTTGATGCAAGGAGACATCTTT
ATAATCCAAAATTTAGAAGATTTTGATCAAGGCATGGCTGTCATTGTCGGATTCCAAAGG
CAGCCATTAATTCCCATAGGCATGTCCGAATATGTGGAATCTTCTGATCCCACATATCCA
CATCCTGTTTTACAGGGTGTGAAAGTTCTGTTAGCTGACTATGATGATTCGAATAGAGCT
GTAACAAGGAAGATGCTCGAGAAATTGGGATGTATCGTTACTGTAGTTTCATCTGGATAT
GAATGCCTCGGTGCTGTTGGCCCCATTGTGTCCTTGTTACAAATTATACTTTTGGATCTT
CACCTGCCTGATTTAGATGGCTTTGAAGTTACCATGAGACTTCGAAAGCATCGAAGCCAG
ACATGGCCTTTGATCATCGGTTTAGCTGCAATTACTGATGAAGATATCAGAAAATGCCTG
AAGATTGGAATGAATGGTATCATCTGTAAACCACTGCTCTTATCAGGACTCGCCGATGAG
CTTCAGAAGGTTCTGCTTCATGCAAACAGAGGAATGCGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400030005
PEP Infomation

pacid=37455480 transcript=PGSC0003DMT400044244 locus=PGSC0003DMG400017186 ID=PGSC0003DMT400044244.v4.03 annot-version=v4.03
Sequence

MLKKVVSWLLFLSIVELWVVDGYIECPCDDSDAFWSMETMLFVQKAGDLGIAVAYFSIPI
EIIYFVTCSSFPFKWVLFQFGAFIVLCGLTHFLTFLTHFGKYTFHLILALIVCKLLTALV
SMLTAITLMNLIPLLLKAKAREFMLRRKNRDLDREVGRIKQKEELGLHVRMLTKEIRKSI
DRHTILYTTLVELSKLLSLQNCVIWMPNENRTEMKLTHDTTRENVSSMYNVPIPISDQEV
KEIKGSDDVKILGAGSRLAAASSRGSCEPETVAAIRIPMLMVSNFGGETHEIVSQCYAIL
VLVQPSGHGRFWLNQEIEIVTAAADQVAVALSHAAVVEESEYIKDRLTEQNQALQKAREE
ALRASQARSAFQTVMSHRLRRPMHSILGLLSMLQEEKLRDEQQLLVHSIIKSSNVVSTLM
DDVIVTSTKENVKFPLEMKHFQLHSLIREAACIAKSLCMYKGYNITIEVEKSFPNQVMGD
ERRFFQVLLHIIGNLLNGTNGGHLTFRALSASENDVSWKTPRSNSSNDIVYIKFEICTKI
NRSESEITPATPTYYIEEIEESLSFAVCRKLVHLMQGDIFIIQNLEDFDQGMAVIVGFQR
QPLIPIGMSEYVESSDPTYPHPVLQGVKVLLADYDDSNRAVTRKMLEKLGCIVTVVSSGY
ECLGAVGPIVSLLQIILLDLHLPDLDGFEVTMRLRKHRSQTWPLIIGLAAITDEDIRKCL
KIGMNGIICKPLLLSGLADELQKVLLHANRGMR*

Transcript Sequence

Transcript ID

PGSC0003DMT400044244
Transcript Infomation

pacid=37455480 locus=PGSC0003DMG400017186 ID=PGSC0003DMT400044244.v4.03 annot-version=v4.03
Sequence

ATGTTGAAGAAAGTAGTATCATGGTTGTTGTTTTTATCGATCGTTGAATTATGGGTTGTT
GATGGTTATATTGAATGTCCTTGTGATGATAGTGATGCATTTTGGAGCATGGAAACAATG
TTATTTGTTCAAAAGGCCGGTGATCTCGGTATAGCAGTGGCCTATTTTTCCATCCCAATC
GAGATCATCTACTTCGTTACCTGTTCTAGTTTTCCGTTCAAATGGGTGCTCTTTCAATTC
GGAGCATTCATTGTACTATGTGGTTTAACACATTTTCTCACCTTCTTGACTCATTTTGGC
AAATACACATTTCACCTTATTCTTGCCCTTATTGTTTGCAAACTACTCACTGCATTAGTT
TCGATGCTCACTGCTATAACACTTATGAATCTCATCCCTTTGCTGCTTAAAGCCAAGGCA
AGGGAATTTATGCTGAGACGAAAGAATCGTGATCTTGATCGAGAAGTTGGAAGAATAAAA
CAAAAGGAGGAACTTGGACTGCATGTTCGGATGCTTACCAAAGAGATCCGGAAGTCAATT
GATCGTCATACAATACTCTACACAACTCTTGTTGAGCTATCGAAGTTATTGAGTTTGCAG
AATTGTGTTATATGGATGCCTAATGAGAACAGAACCGAGATGAAACTGACTCATGATACT
ACAAGGGAAAATGTTTCGAGTATGTATAATGTGCCTATCCCGATCAGTGATCAAGAAGTA
AAAGAGATCAAGGGGAGTGATGATGTAAAGATACTTGGAGCGGGCTCCCGACTTGCTGCT
GCAAGCAGTAGAGGGAGTTGTGAGCCAGAAACTGTGGCTGCTATTAGGATTCCAATGCTG
ATGGTCTCGAATTTCGGAGGTGAAACTCATGAGATTGTCTCGCAATGTTATGCTATCCTC
GTTTTGGTTCAACCTAGTGGACATGGTAGGTTTTGGCTTAACCAGGAAATTGAGATAGTC
ACGGCTGCAGCTGATCAAGTTGCTGTGGCGTTGTCCCATGCTGCAGTGGTTGAAGAATCT
GAGTATATCAAAGACAGATTGACAGAACAGAATCAAGCACTGCAAAAAGCGAGAGAGGAA
GCTCTTAGAGCAAGTCAAGCTAGGAGTGCATTTCAGACGGTTATGAGCCATCGGTTGAGA
AGACCGATGCACTCAATTTTGGGTCTGCTCTCGATGTTGCAGGAAGAGAAGTTACGAGAT
GAACAACAGCTTCTTGTGCATTCTATAATCAAATCCAGCAACGTTGTCTCCACCCTGATG
GATGATGTTATAGTTACTTCAACCAAGGAGAACGTAAAATTCCCATTGGAAATGAAGCAT
TTTCAGCTACATTCCTTGATACGAGAAGCTGCTTGTATCGCCAAATCTTTGTGTATGTAT
AAGGGTTACAACATTACCATTGAGGTTGAAAAATCATTTCCTAATCAAGTCATGGGTGAT
GAAAGAAGATTTTTTCAAGTTTTGCTTCATATAATCGGAAATCTTTTGAATGGCACCAAC
GGAGGACATCTTACCTTCAGAGCTCTCTCAGCAAGTGAAAATGATGTAAGTTGGAAAACG
CCGAGATCAAACTCATCTAATGACATTGTCTATATCAAGTTTGAAATTTGCACAAAAATT
AATCGATCTGAGTCAGAGATCACCCCTGCTACTCCGACGTACTACATTGAGGAGATTGAG
GAGAGTTTGAGCTTTGCTGTTTGCAGGAAGTTGGTTCATTTGATGCAAGGAGACATCTTT
ATAATCCAAAATTTAGAAGATTTTGATCAAGGCATGGCTGTCATTGTCGGATTCCAAAGG
CAGCCATTAATTCCCATAGGCATGTCCGAATATGTGGAATCTTCTGATCCCACATATCCA
CATCCTGTTTTACAGGGTGTGAAAGTTCTGTTAGCTGACTATGATGATTCGAATAGAGCT
GTAACAAGGAAGATGCTCGAGAAATTGGGATGTATCGTTACTGTAGTTTCATCTGGATAT
GAATGCCTCGGTGCTGTTGGCCCCATTGTGTCCTTGTTACAAATTATACTTTTGGATCTT
CACCTGCCTGATTTAGATGGCTTTGAAGTTACCATGAGACTTCGAAAGCATCGAAGCCAG
ACATGGCCTTTGATCATCGGTTTAGCTGCAATTACTGATGAAGATATCAGAAAATGCCTG
AAGATTGGAATGAATGGTATCATCTGTAAACCACTGCTCTTATCAGGACTCGCCGATGAG
CTTCAGAAGGTTCTGCTTCATGCAAACAGAGGAATGCGATGA