Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044237
CDS Infomation

pacid=37456333 polypeptide=PGSC0003DMP400029999 locus=PGSC0003DMG400017183 ID=PGSC0003DMT400044237.v4.03 annot-version=v4.03
Sequence

ATGGATTATGATCCATCGGTTGAGAAAAAGGCTATTGATGATACAAAAGCCGGTGTTAAA
GGACTAGTTGATTCTGGAATAGTGGAGATTCCAAGAATTTTCATTAGGCCATCTCATGAA
CTTGCTGAGGAGTTAACTATGTGCAAGTCAACTCTACAGATTCCGGTGGTGGATCTAAGT
GGCATAGAAGTTGAAGATGGGCGTAAGAAGATTGTCGAAGAAATAAGGGATGCATCTGAG
AAATGGGGATTTTTTCAACTGATAAATCATGGGGTTCCTTCAAGTGTTTTGGAAGGAATG
ATTGATGGGACTCGTAAATTTCATGAACAAGATGTTGAAGTGAAGAAAGAGTACTATTCG
TCTGATCCAACCCGAGGAGTTAGATTTGAGAGCAATCTTCAACTGTTGACAACAAAAGGA
AGAAATGCAACCTGGAAGGATACATTATATATCTCTAAGCTAGTTTCTGAACCTGATGAA
ATACCAGAAGTTTGCAGGAAAATATTGGTTGAGTACAAAAATCATGTCATAAAACTAGGG
GACATTCTTCTTGGCTTACTATCAGAAGCTCTTGGGCTAAAACCTGACCACTTGAAATCC
GCGGATTGTAACAAAGGACTAATGTTGGCATGCCATTACTACCCTGCATGCCCACAGCCA
GAGCTTACTCTTGGTACCGGTAAGCATACAGATCCTGTTTTTGTTACCATTCTGCTTCAA
GATCAGAGTGGTGGGCTCCAAGTCATGCGTGATAACCAATGGGCTGATGTTGAACCGATT
GAACATGGTTTGGTTATTAATATTGGTGACCTTCTTCAGATCGTATCAAATGACAAGTTT
GTAAGTGCAATTCATAGAGTTGTAGCAAATAAGGTAGGACCAAGGATTTCAGCGGCAAGC
TTCTTCACTGGAGGTTCTACACCTCCGAAGATGTATGGTCCAATCAAAGAGCTCATATCT
GATGAAAACCCCCAACTATATAAAGATTTTCTAGCTGCTGATTATACTGCTAAGTATTTC
TCCAAGCCTCTTGATACTCGTGATCTTTTCAGACTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029999
PEP Infomation

pacid=37456333 transcript=PGSC0003DMT400044237 locus=PGSC0003DMG400017183 ID=PGSC0003DMT400044237.v4.03 annot-version=v4.03
Sequence

MDYDPSVEKKAIDDTKAGVKGLVDSGIVEIPRIFIRPSHELAEELTMCKSTLQIPVVDLS
GIEVEDGRKKIVEEIRDASEKWGFFQLINHGVPSSVLEGMIDGTRKFHEQDVEVKKEYYS
SDPTRGVRFESNLQLLTTKGRNATWKDTLYISKLVSEPDEIPEVCRKILVEYKNHVIKLG
DILLGLLSEALGLKPDHLKSADCNKGLMLACHYYPACPQPELTLGTGKHTDPVFVTILLQ
DQSGGLQVMRDNQWADVEPIEHGLVINIGDLLQIVSNDKFVSAIHRVVANKVGPRISAAS
FFTGGSTPPKMYGPIKELISDENPQLYKDFLAADYTAKYFSKPLDTRDLFRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400044237
Transcript Infomation

pacid=37456333 locus=PGSC0003DMG400017183 ID=PGSC0003DMT400044237.v4.03 annot-version=v4.03
Sequence

ATGGATTATGATCCATCGGTTGAGAAAAAGGCTATTGATGATACAAAAGCCGGTGTTAAA
GGACTAGTTGATTCTGGAATAGTGGAGATTCCAAGAATTTTCATTAGGCCATCTCATGAA
CTTGCTGAGGAGTTAACTATGTGCAAGTCAACTCTACAGATTCCGGTGGTGGATCTAAGT
GGCATAGAAGTTGAAGATGGGCGTAAGAAGATTGTCGAAGAAATAAGGGATGCATCTGAG
AAATGGGGATTTTTTCAACTGATAAATCATGGGGTTCCTTCAAGTGTTTTGGAAGGAATG
ATTGATGGGACTCGTAAATTTCATGAACAAGATGTTGAAGTGAAGAAAGAGTACTATTCG
TCTGATCCAACCCGAGGAGTTAGATTTGAGAGCAATCTTCAACTGTTGACAACAAAAGGA
AGAAATGCAACCTGGAAGGATACATTATATATCTCTAAGCTAGTTTCTGAACCTGATGAA
ATACCAGAAGTTTGCAGGAAAATATTGGTTGAGTACAAAAATCATGTCATAAAACTAGGG
GACATTCTTCTTGGCTTACTATCAGAAGCTCTTGGGCTAAAACCTGACCACTTGAAATCC
GCGGATTGTAACAAAGGACTAATGTTGGCATGCCATTACTACCCTGCATGCCCACAGCCA
GAGCTTACTCTTGGTACCGGTAAGCATACAGATCCTGTTTTTGTTACCATTCTGCTTCAA
GATCAGAGTGGTGGGCTCCAAGTCATGCGTGATAACCAATGGGCTGATGTTGAACCGATT
GAACATGGTTTGGTTATTAATATTGGTGACCTTCTTCAGATCGTATCAAATGACAAGTTT
GTAAGTGCAATTCATAGAGTTGTAGCAAATAAGGTAGGACCAAGGATTTCAGCGGCAAGC
TTCTTCACTGGAGGTTCTACACCTCCGAAGATGTATGGTCCAATCAAAGAGCTCATATCT
GATGAAAACCCCCAACTATATAAAGATTTTCTAGCTGCTGATTATACTGCTAAGTATTTC
TCCAAGCCTCTTGATACTCGTGATCTTTTCAGACTGTGA