Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044210
CDS Infomation

pacid=37458792 polypeptide=PGSC0003DMP400029978 locus=PGSC0003DMG400017165 ID=PGSC0003DMT400044210.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTACACCATCATCAAAGAATCATACAACTCCGACTCCGTCATCAAAATTGCAC
CAGACCCATGTAAATTCAAGAACCCCACAATCGAAACATCGTCTAAATTTCAACTCAGCA
AAACCTTCACCAAACCCTAATTCTACAGCAATGAAAGAAGGGGGTCCACCTCCCGAGCAC
CCGGTAGAGGTTATTGGTAGGATTCGTGATTACCCGGATAAAAAGGAGAAACCTTTATCA
GCATTGCAAGTGAATTCTGACTGTCGGTCCCTACGTGTTAGGACTGATATAGGGTATAGG
GATTTTACTCTTGATGGTGTGTCGTTATCTGAAGAAGAAGATCTTGATGAGTTTTATAAG
AAATTTGTGGAGTCAAGAATTGATGGGGTGAAATTAGGGGATAAATGTACTATAATGATG
TATGGACCAACTGGTGCTGGTAAGAGTCATACTATGTTTGGGAGTGTTAAGCAGCCTGGA
ATTGTGTATAGGTCATTGAAGGATATATTGGGTGATGGAAATGAAGAAAATGATGAAAAT
AGTGAGAAGAAGGTTGGTGTTGGCACATTTGTTCATGTTACTGTGTTGGAGATTTATAAT
GAGGAGATTTATGATTTGTTATCGACGACTAATGGTGGTGGAGGATTTGCTTTTGGTTGG
TCCAAGGCCTGTGCTTCCAAGGTGAAACTGGAAGTTATAGGTAAAAAGGCCAAAAATGCA
ACTTTTATTTCAGGGACTGAAGCTATAAAGATATCGAAAGAGATCCAAAAAGTAGAGAAG
AGAAGAATAGTAAAGAGTACTCTGTGTAACGAGAGGAGCTCTCGGAGCCACTGCATGATA
ATCCTTGACGTTCCAACAGTGGGTGGGCGACTAATGCTTGTGGATATGGCCGGTTCTGAG
AATATTGAACAAGCTGGTCAAACTGGTTTGGAAGCAAAAATGCAGACTGCGAAAATCAAC
CAGGGAAACATTGCATTGAAGAGGGTTGTTGAGTCCATTGCTAATGGTGATTCTCACGTG
CCATTTCGTGATAGCAAGTTAACCATGCTATTACAGGACTCTTTCGAGGATGACAAGTCC
AAAATTCTTATGATACTATGTGCAAGTCCAGATCCTAAAGAGCTCCACAAGACTATCTCC
ACTCTGGAATATGGTGCCAAAGCAAAGTGCATTGTCCGCGGTCCTCATACGCCATTGAAG
GAGAAAGGTACAGAGGATTCTTCATCGACAGTTATCTTGGGATCAAGGATTGCCGTTATG
GATCAGTTCATCTACAAGCTTCAGATGGAGAACAAGCTGAAAGAGAAAGAGCGTAATGAA
GCTCAGAAAGAGCTTATGAAGAAAGAAGAAGAAATGGCTACACTAAGGGCCAAACTGGAG
TTAGTACAAGGAAAGGGAATGGAGATAACCGAGGAGCAGATCAATCTTAAAGTAAACGAG
CGAACTCAGATGTTGAAGAGTGAGTTGGAAAAGAAGATACAAGAATGTCAGAAAATGGCA
AATGAAATTGTTGAAATGGAGAGGAGGAAGATGGAAGAAAGAATGTTCCAGCAGCAACAA
GAATTTGAAATGCTCCGGAGGCGCTTGGAGGATATGGAAGCTGAGCTTCATCGCTCTAGG
GCTGAAAGTGGATCAATGGAGGAAAATACTTTCGCGAAAAGGCTGCAGGAGATTTACTCT
GAAGATGCAGGAATGGTAAAGTCTATGGATTTGGACAGATCAATTGATATGGACGTTGGA
AAGCGGGATGTACTGGTCTATAAACCTGAAGGCAATACTTCCCAAGCAATCTCGGGTTAT
CCTAACATAAGCAATTTAGGAGAAGTTGAAGATCCACTTTTCACCAATAAAAGTAGCTTG
AGCACTGTATTTGAAGAGGACGAAGAAGGTGATGATGAAGGAGATACAGAGAATCCCCCC
GTTGATGAGGAGGTGCAGAAGGAGGTCATTGAGGAAAAAACAATATGTTCTGGTCTGCTT
GATCATGATATGAGTTGTTTGAGACCAGATCCTGATCATTTCAGTGATTTATGCAAGGAC
AATGATGTTTGTATGGGTGCAGCCCCTTCTAGGCAAGCGCTTATTCAGAACATTTTCACA
CTCTGTGGCAATTATAGAGAGCTTTCTCAGCATAGTGTAAGCCCAGTGCCTGCACAGAAG
AATTTGGAAGATACTGATTCTTCAGTACCAACAGTTAAGACAATCAGAGAGGATTATGCA
TCTGTGCTTGCTGCAGAAGGTTTGTCCAATGATCTTTTGCCATTATGTAATCCCGAGACC
ATACAAAAGTCACCAGTTAATCAGACAAGAATGTTTAAGAGCTCTTATGATAAAGAAAAT
GATTCAAAGGAGAACTTTAATCCTACTTCTGGCAATCTCGAAGTCCACGTGAAATGGGAA
GCTGCATCAAAAGAGAATCCTGGTGTAGCAACCACGGTAAAGGTTGGCAAAGATTCATCC
TTAGCTGATCTGCGCAAACTGATTGAGATACACCTCGGTGCTGACAGTTCATTCACTTTC
CTTGCAATAGGGGATCCATCTGGTGCCCCGATGCCTAAAGAACAGGAGGTAGTCACACCA
GTGAGTAAGCTTCCAAAATGCAACAACTTCTCACGTGGTCACTTAGCTTACTTACGCCCA
GTGAAGGGAACACAACGGTCCAATCACTTGCCATTTACCTCACTGGAAAATATGCTTCCA
TTGACTCCAAAGTCACATATCAAAGAAGTAGGTACTGGACTTTCTCCCAAAGTAGGAGAA
CATCTGAGTAGAACACCTTTTGTAACTGTCAAAAGATATCTAAATGAGTGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029978
PEP Infomation

pacid=37458792 transcript=PGSC0003DMT400044210 locus=PGSC0003DMG400017165 ID=PGSC0003DMT400044210.v4.03 annot-version=v4.03
Sequence

MAPTPSSKNHTTPTPSSKLHQTHVNSRTPQSKHRLNFNSAKPSPNPNSTAMKEGGPPPEH
PVEVIGRIRDYPDKKEKPLSALQVNSDCRSLRVRTDIGYRDFTLDGVSLSEEEDLDEFYK
KFVESRIDGVKLGDKCTIMMYGPTGAGKSHTMFGSVKQPGIVYRSLKDILGDGNEENDEN
SEKKVGVGTFVHVTVLEIYNEEIYDLLSTTNGGGGFAFGWSKACASKVKLEVIGKKAKNA
TFISGTEAIKISKEIQKVEKRRIVKSTLCNERSSRSHCMIILDVPTVGGRLMLVDMAGSE
NIEQAGQTGLEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKS
KILMILCASPDPKELHKTISTLEYGAKAKCIVRGPHTPLKEKGTEDSSSTVILGSRIAVM
DQFIYKLQMENKLKEKERNEAQKELMKKEEEMATLRAKLELVQGKGMEITEEQINLKVNE
RTQMLKSELEKKIQECQKMANEIVEMERRKMEERMFQQQQEFEMLRRRLEDMEAELHRSR
AESGSMEENTFAKRLQEIYSEDAGMVKSMDLDRSIDMDVGKRDVLVYKPEGNTSQAISGY
PNISNLGEVEDPLFTNKSSLSTVFEEDEEGDDEGDTENPPVDEEVQKEVIEEKTICSGLL
DHDMSCLRPDPDHFSDLCKDNDVCMGAAPSRQALIQNIFTLCGNYRELSQHSVSPVPAQK
NLEDTDSSVPTVKTIREDYASVLAAEGLSNDLLPLCNPETIQKSPVNQTRMFKSSYDKEN
DSKENFNPTSGNLEVHVKWEAASKENPGVATTVKVGKDSSLADLRKLIEIHLGADSSFTF
LAIGDPSGAPMPKEQEVVTPVSKLPKCNNFSRGHLAYLRPVKGTQRSNHLPFTSLENMLP
LTPKSHIKEVGTGLSPKVGEHLSRTPFVTVKRYLNEC*

Transcript Sequence

Transcript ID

PGSC0003DMT400044210
Transcript Infomation

pacid=37458792 locus=PGSC0003DMG400017165 ID=PGSC0003DMT400044210.v4.03 annot-version=v4.03
Sequence

ATGGCTCCTACACCATCATCAAAGAATCATACAACTCCGACTCCGTCATCAAAATTGCAC
CAGACCCATGTAAATTCAAGAACCCCACAATCGAAACATCGTCTAAATTTCAACTCAGCA
AAACCTTCACCAAACCCTAATTCTACAGCAATGAAAGAAGGGGGTCCACCTCCCGAGCAC
CCGGTAGAGGTTATTGGTAGGATTCGTGATTACCCGGATAAAAAGGAGAAACCTTTATCA
GCATTGCAAGTGAATTCTGACTGTCGGTCCCTACGTGTTAGGACTGATATAGGGTATAGG
GATTTTACTCTTGATGGTGTGTCGTTATCTGAAGAAGAAGATCTTGATGAGTTTTATAAG
AAATTTGTGGAGTCAAGAATTGATGGGGTGAAATTAGGGGATAAATGTACTATAATGATG
TATGGACCAACTGGTGCTGGTAAGAGTCATACTATGTTTGGGAGTGTTAAGCAGCCTGGA
ATTGTGTATAGGTCATTGAAGGATATATTGGGTGATGGAAATGAAGAAAATGATGAAAAT
AGTGAGAAGAAGGTTGGTGTTGGCACATTTGTTCATGTTACTGTGTTGGAGATTTATAAT
GAGGAGATTTATGATTTGTTATCGACGACTAATGGTGGTGGAGGATTTGCTTTTGGTTGG
TCCAAGGCCTGTGCTTCCAAGGTGAAACTGGAAGTTATAGGTAAAAAGGCCAAAAATGCA
ACTTTTATTTCAGGGACTGAAGCTATAAAGATATCGAAAGAGATCCAAAAAGTAGAGAAG
AGAAGAATAGTAAAGAGTACTCTGTGTAACGAGAGGAGCTCTCGGAGCCACTGCATGATA
ATCCTTGACGTTCCAACAGTGGGTGGGCGACTAATGCTTGTGGATATGGCCGGTTCTGAG
AATATTGAACAAGCTGGTCAAACTGGTTTGGAAGCAAAAATGCAGACTGCGAAAATCAAC
CAGGGAAACATTGCATTGAAGAGGGTTGTTGAGTCCATTGCTAATGGTGATTCTCACGTG
CCATTTCGTGATAGCAAGTTAACCATGCTATTACAGGACTCTTTCGAGGATGACAAGTCC
AAAATTCTTATGATACTATGTGCAAGTCCAGATCCTAAAGAGCTCCACAAGACTATCTCC
ACTCTGGAATATGGTGCCAAAGCAAAGTGCATTGTCCGCGGTCCTCATACGCCATTGAAG
GAGAAAGGTACAGAGGATTCTTCATCGACAGTTATCTTGGGATCAAGGATTGCCGTTATG
GATCAGTTCATCTACAAGCTTCAGATGGAGAACAAGCTGAAAGAGAAAGAGCGTAATGAA
GCTCAGAAAGAGCTTATGAAGAAAGAAGAAGAAATGGCTACACTAAGGGCCAAACTGGAG
TTAGTACAAGGAAAGGGAATGGAGATAACCGAGGAGCAGATCAATCTTAAAGTAAACGAG
CGAACTCAGATGTTGAAGAGTGAGTTGGAAAAGAAGATACAAGAATGTCAGAAAATGGCA
AATGAAATTGTTGAAATGGAGAGGAGGAAGATGGAAGAAAGAATGTTCCAGCAGCAACAA
GAATTTGAAATGCTCCGGAGGCGCTTGGAGGATATGGAAGCTGAGCTTCATCGCTCTAGG
GCTGAAAGTGGATCAATGGAGGAAAATACTTTCGCGAAAAGGCTGCAGGAGATTTACTCT
GAAGATGCAGGAATGGTAAAGTCTATGGATTTGGACAGATCAATTGATATGGACGTTGGA
AAGCGGGATGTACTGGTCTATAAACCTGAAGGCAATACTTCCCAAGCAATCTCGGGTTAT
CCTAACATAAGCAATTTAGGAGAAGTTGAAGATCCACTTTTCACCAATAAAAGTAGCTTG
AGCACTGTATTTGAAGAGGACGAAGAAGGTGATGATGAAGGAGATACAGAGAATCCCCCC
GTTGATGAGGAGGTGCAGAAGGAGGTCATTGAGGAAAAAACAATATGTTCTGGTCTGCTT
GATCATGATATGAGTTGTTTGAGACCAGATCCTGATCATTTCAGTGATTTATGCAAGGAC
AATGATGTTTGTATGGGTGCAGCCCCTTCTAGGCAAGCGCTTATTCAGAACATTTTCACA
CTCTGTGGCAATTATAGAGAGCTTTCTCAGCATAGTGTAAGCCCAGTGCCTGCACAGAAG
AATTTGGAAGATACTGATTCTTCAGTACCAACAGTTAAGACAATCAGAGAGGATTATGCA
TCTGTGCTTGCTGCAGAAGGTTTGTCCAATGATCTTTTGCCATTATGTAATCCCGAGACC
ATACAAAAGTCACCAGTTAATCAGACAAGAATGTTTAAGAGCTCTTATGATAAAGAAAAT
GATTCAAAGGAGAACTTTAATCCTACTTCTGGCAATCTCGAAGTCCACGTGAAATGGGAA
GCTGCATCAAAAGAGAATCCTGGTGTAGCAACCACGGTAAAGGTTGGCAAAGATTCATCC
TTAGCTGATCTGCGCAAACTGATTGAGATACACCTCGGTGCTGACAGTTCATTCACTTTC
CTTGCAATAGGGGATCCATCTGGTGCCCCGATGCCTAAAGAACAGGAGGTAGTCACACCA
GTGAGTAAGCTTCCAAAATGCAACAACTTCTCACGTGGTCACTTAGCTTACTTACGCCCA
GTGAAGGGAACACAACGGTCCAATCACTTGCCATTTACCTCACTGGAAAATATGCTTCCA
TTGACTCCAAAGTCACATATCAAAGAAGTAGGTACTGGACTTTCTCCCAAAGTAGGAGAA
CATCTGAGTAGAACACCTTTTGTAACTGTCAAAAGATATCTAAATGAGTGTTAG