Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044198
CDS Infomation

pacid=37455658 polypeptide=PGSC0003DMP400029968 locus=PGSC0003DMG400017158 ID=PGSC0003DMT400044198.v4.03 annot-version=v4.03
Sequence

ATGGCACCTACTACGACCACCATGACACAACATCTTCGCCATGCAAATACTATTGGCGAA
GATGTTGCGTCCGTTGACATTGACCTTATTTGGCCATTTGAAAATATTGACGGTCTTCAT
CGTGACCATTTCCGCAACGCGGCTTACGAGATATTCTTCACCGCATGTCGGTCATCACCG
GGGTTTGGGAGTAGGACGGCTATCTCATATCATAATCCATCTGAAGGAGGAGATGGAAGC
GGGTCCGGGGCTGGATCTACCAGCCCCGGATCACCGGTGAAGCCATCTGGGGTAGGGATG
GCCGTGACTAGCAAGGTGAAAACCATGCTAGGGTTGAAGATGTTGAAACGGTCACGTTCA
CGAAGAGCTAGCTCTTATGGAGGCAACCCCTCGTCCCCCGGGGGCGGTGCTAGCCCCAAG
GTGGGATTCACCGTGCCCCATTCGAGGGCACGGAGACCGATGACGTCGGCCGAGATTATG
AGGCGGCAAATGAGGGTGTCGGAGCAAAGTGATAGTAGGCTACGTAAAACTCTCATGAGA
ACTCTTGTTGGACAAATGGGGAGAAGAGCAGAGACAATAATCTTACCATTAGAGCTTTTA
CGCCATCTTAAACCATCCGAATTCAACGATTCTCACGAATACCATCAATGGCAAAAACGT
CAGTTCAGAATCCTTGAAGCAGGCCTTCTCCTTTACCCTTCACTTCCAGTAGAAAAATCA
AACACATCCGCTAAACGCTTCAGAGAGATCATAAGATCAGCTGAAACGAAAGCCATCGAC
ACTGGCAAGAATTCGGAGACAATGAGAGCACTTTGTAATTCAGTAGTGTCCTTAGCCTGG
AGAACAAGTGATGGTTCAGCAACTGATATTTGTCATTGGGCTGATGGATTCCCTTTAAAT
ATCCACATTTATACTGCTCTGTTATCCTCTGTTTTCGACTTAAAAGACGATACAATGGTT
CTTGATGAAGTCGACGAGCTTCTTGAATTGATGAAAAAAACATGGGTGATTTTGGGTGTC
AATAAGTCAATTCATAACTTGTGTTTCACTTGGGTGTTATTCGAGCAGTACATCGTCACT
GGCCAGGTTGAGCCTGATCTTTTAGGCGCAGCGATGATCATGTTGAGTACTGAAGTTGCT
ACTGATGCTAAGAAAGTTGATATGGAGCCTTTTTATGTTAAGATGTTGGCAAATGTGTTG
ATATCAATGAGGGAATGGTCGGAGAAAAGATTGGTTAACTATCATGATAGTTTCAATAGG
GGGAGTGCTGGATTGTTGGAGAATAATCTTCCTTTATTCTTCGCGGCCATGAAGATATTA
GAGGAAGATGTTCCGGGATATACATCTGATGTTTTTGAGAAAAGGGATGAACTCGCGGAG
GATGATTCAGATGGAAATAAAGTTTGTTACTTTATTCGTTCGTCCATGAGGGATGCATTT
GCTAAGATATTGGAAGAAATGAGCATAGATGGTGCAAGTTTTGAATTGGAAGAAGTGAGT
CAGACACTAATTAAGTTAGCCTATGAAACTGAAGAATTAGCAAATAAGGAGAAGGAAACT
TTCAGCCCTGTACTCAAGAAGTGGCATCCTATTGCAGCAGGAGTAGCAGCTGTGGCGTTA
CATTCTTGCTATGGAACTTTGTTGAAGCAATATCTCACGGGCGCGACTTTGCTCACAAAA
CAAACAGTTTCGGTATTGCAGAAGGCTGGAAAACTCGAAAAAGTATTAATCCAAATGGTA
GTGGAGGATTCGGATGAATGTGAGGATGGAGGCAAAGCCACATTGTCAGAGATGATTCCT
TATGAAACTGATTCAATCATAATGAATCTTCTGAGAAAATGGATTCAAGAAAGGTTGAAG
AAAGGAAAGGAGATTATAATGAGGGCAAAAGAAACTGAAACATGGAATCCAAAATCCAAA
AGTGAGCCATATGCACAATCAGCAGTTGATCTAATGAGACATGCCAAGGAAGCTGTGGAC
AATTTCTTTGAAATCCCAATGGCCATGTCAGAGGACTTAGTAGAGGATCTTGCTGTTGGC
TTTGAGCATCTGTTTAAGGAATATGTTACCTTTGCCACATCATGTGGGTCAAAGCAAAGC
TACATTCCTACACTTCCTCCTCTAACAAGATGTAGCCAAGATTCAAGGTTTTCCAAACTG
TGGAAGTTTGCTGTTTGCAGTGTAGGAGCAGATGAACAAAACCATCATATAGCAGATGAA
GGCAATCATCCCCGCCTTTCAACGAGCCGAGGGACACAACGTCTATATATAAGGCTAAAC
ACTTTGCATTACTTTCTTCTACAACTCCATTCCCTTGATAAAACTTTATCAATCTCCTCG
AAAACTGTTCCTACTCCAAGAAGTCGTCACAGCAAGAATAGACAGATAGGGAGCTGCTCC
TACTTTGATCACACGCGTTCAGCCATCCAAGTAGCTGTACAACATGTATCAGAAGTTGCT
GCTTATCGTCTCATTTTCTTCGATTCTCACTGTGTATTCTATGGTAACCTCTATATCAGG
GACGTTGAGAGCACACGTATACGACCAGCATTAAGGGCACTCAAGCAAAACCTCACTCTT
TTATGCGCGATCCTCACTGACAAGGCTCAGCCATTGGCCTTAAAAGAAGTGATGAAGGCT
TCATTTGAGGCCTACCTCATGGTTCTACTAGCCGGAGGAAGCAAAAGACTCTTTTCGAGA
GCTGATCATCAGATAATAGAAGAGGACTTTGAGAGCCTAAAGAGGGTGTTCTGTACTTGT
GGTGAAGGATTGGTAGTAGAGGATGTTGTGGACACAGAAGCTGAGACGGTCGAGGGGGTG
ATAGCTTTAATGGGACAATCAACTGAGCAATTGGTTGAAGATTTCAGCATTGTGGCATGT
GAAGCTAGTGGAATGGGAGTTGTGGGATCAGGACAGAAACTACCTATGCCTCCAACAACA
GGAAGATGGAATAGAGCAGATCCCAATACAATCTTGAGGGTAGTTTGTCATAGAAATGAC
AAAGTTGCTAATCACTTCTTGAAGAAAACATTCCAATTAGCAAAAAGGAGGCCATATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029968
PEP Infomation

pacid=37455658 transcript=PGSC0003DMT400044198 locus=PGSC0003DMG400017158 ID=PGSC0003DMT400044198.v4.03 annot-version=v4.03
Sequence

MAPTTTTMTQHLRHANTIGEDVASVDIDLIWPFENIDGLHRDHFRNAAYEIFFTACRSSP
GFGSRTAISYHNPSEGGDGSGSGAGSTSPGSPVKPSGVGMAVTSKVKTMLGLKMLKRSRS
RRASSYGGNPSSPGGGASPKVGFTVPHSRARRPMTSAEIMRRQMRVSEQSDSRLRKTLMR
TLVGQMGRRAETIILPLELLRHLKPSEFNDSHEYHQWQKRQFRILEAGLLLYPSLPVEKS
NTSAKRFREIIRSAETKAIDTGKNSETMRALCNSVVSLAWRTSDGSATDICHWADGFPLN
IHIYTALLSSVFDLKDDTMVLDEVDELLELMKKTWVILGVNKSIHNLCFTWVLFEQYIVT
GQVEPDLLGAAMIMLSTEVATDAKKVDMEPFYVKMLANVLISMREWSEKRLVNYHDSFNR
GSAGLLENNLPLFFAAMKILEEDVPGYTSDVFEKRDELAEDDSDGNKVCYFIRSSMRDAF
AKILEEMSIDGASFELEEVSQTLIKLAYETEELANKEKETFSPVLKKWHPIAAGVAAVAL
HSCYGTLLKQYLTGATLLTKQTVSVLQKAGKLEKVLIQMVVEDSDECEDGGKATLSEMIP
YETDSIIMNLLRKWIQERLKKGKEIIMRAKETETWNPKSKSEPYAQSAVDLMRHAKEAVD
NFFEIPMAMSEDLVEDLAVGFEHLFKEYVTFATSCGSKQSYIPTLPPLTRCSQDSRFSKL
WKFAVCSVGADEQNHHIADEGNHPRLSTSRGTQRLYIRLNTLHYFLLQLHSLDKTLSISS
KTVPTPRSRHSKNRQIGSCSYFDHTRSAIQVAVQHVSEVAAYRLIFFDSHCVFYGNLYIR
DVESTRIRPALRALKQNLTLLCAILTDKAQPLALKEVMKASFEAYLMVLLAGGSKRLFSR
ADHQIIEEDFESLKRVFCTCGEGLVVEDVVDTEAETVEGVIALMGQSTEQLVEDFSIVAC
EASGMGVVGSGQKLPMPPTTGRWNRADPNTILRVVCHRNDKVANHFLKKTFQLAKRRPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400044198
Transcript Infomation

pacid=37455658 locus=PGSC0003DMG400017158 ID=PGSC0003DMT400044198.v4.03 annot-version=v4.03
Sequence

ATGGCACCTACTACGACCACCATGACACAACATCTTCGCCATGCAAATACTATTGGCGAA
GATGTTGCGTCCGTTGACATTGACCTTATTTGGCCATTTGAAAATATTGACGGTCTTCAT
CGTGACCATTTCCGCAACGCGGCTTACGAGATATTCTTCACCGCATGTCGGTCATCACCG
GGGTTTGGGAGTAGGACGGCTATCTCATATCATAATCCATCTGAAGGAGGAGATGGAAGC
GGGTCCGGGGCTGGATCTACCAGCCCCGGATCACCGGTGAAGCCATCTGGGGTAGGGATG
GCCGTGACTAGCAAGGTGAAAACCATGCTAGGGTTGAAGATGTTGAAACGGTCACGTTCA
CGAAGAGCTAGCTCTTATGGAGGCAACCCCTCGTCCCCCGGGGGCGGTGCTAGCCCCAAG
GTGGGATTCACCGTGCCCCATTCGAGGGCACGGAGACCGATGACGTCGGCCGAGATTATG
AGGCGGCAAATGAGGGTGTCGGAGCAAAGTGATAGTAGGCTACGTAAAACTCTCATGAGA
ACTCTTGTTGGACAAATGGGGAGAAGAGCAGAGACAATAATCTTACCATTAGAGCTTTTA
CGCCATCTTAAACCATCCGAATTCAACGATTCTCACGAATACCATCAATGGCAAAAACGT
CAGTTCAGAATCCTTGAAGCAGGCCTTCTCCTTTACCCTTCACTTCCAGTAGAAAAATCA
AACACATCCGCTAAACGCTTCAGAGAGATCATAAGATCAGCTGAAACGAAAGCCATCGAC
ACTGGCAAGAATTCGGAGACAATGAGAGCACTTTGTAATTCAGTAGTGTCCTTAGCCTGG
AGAACAAGTGATGGTTCAGCAACTGATATTTGTCATTGGGCTGATGGATTCCCTTTAAAT
ATCCACATTTATACTGCTCTGTTATCCTCTGTTTTCGACTTAAAAGACGATACAATGGTT
CTTGATGAAGTCGACGAGCTTCTTGAATTGATGAAAAAAACATGGGTGATTTTGGGTGTC
AATAAGTCAATTCATAACTTGTGTTTCACTTGGGTGTTATTCGAGCAGTACATCGTCACT
GGCCAGGTTGAGCCTGATCTTTTAGGCGCAGCGATGATCATGTTGAGTACTGAAGTTGCT
ACTGATGCTAAGAAAGTTGATATGGAGCCTTTTTATGTTAAGATGTTGGCAAATGTGTTG
ATATCAATGAGGGAATGGTCGGAGAAAAGATTGGTTAACTATCATGATAGTTTCAATAGG
GGGAGTGCTGGATTGTTGGAGAATAATCTTCCTTTATTCTTCGCGGCCATGAAGATATTA
GAGGAAGATGTTCCGGGATATACATCTGATGTTTTTGAGAAAAGGGATGAACTCGCGGAG
GATGATTCAGATGGAAATAAAGTTTGTTACTTTATTCGTTCGTCCATGAGGGATGCATTT
GCTAAGATATTGGAAGAAATGAGCATAGATGGTGCAAGTTTTGAATTGGAAGAAGTGAGT
CAGACACTAATTAAGTTAGCCTATGAAACTGAAGAATTAGCAAATAAGGAGAAGGAAACT
TTCAGCCCTGTACTCAAGAAGTGGCATCCTATTGCAGCAGGAGTAGCAGCTGTGGCGTTA
CATTCTTGCTATGGAACTTTGTTGAAGCAATATCTCACGGGCGCGACTTTGCTCACAAAA
CAAACAGTTTCGGTATTGCAGAAGGCTGGAAAACTCGAAAAAGTATTAATCCAAATGGTA
GTGGAGGATTCGGATGAATGTGAGGATGGAGGCAAAGCCACATTGTCAGAGATGATTCCT
TATGAAACTGATTCAATCATAATGAATCTTCTGAGAAAATGGATTCAAGAAAGGTTGAAG
AAAGGAAAGGAGATTATAATGAGGGCAAAAGAAACTGAAACATGGAATCCAAAATCCAAA
AGTGAGCCATATGCACAATCAGCAGTTGATCTAATGAGACATGCCAAGGAAGCTGTGGAC
AATTTCTTTGAAATCCCAATGGCCATGTCAGAGGACTTAGTAGAGGATCTTGCTGTTGGC
TTTGAGCATCTGTTTAAGGAATATGTTACCTTTGCCACATCATGTGGGTCAAAGCAAAGC
TACATTCCTACACTTCCTCCTCTAACAAGATGTAGCCAAGATTCAAGGTTTTCCAAACTG
TGGAAGTTTGCTGTTTGCAGTGTAGGAGCAGATGAACAAAACCATCATATAGCAGATGAA
GGCAATCATCCCCGCCTTTCAACGAGCCGAGGGACACAACGTCTATATATAAGGCTAAAC
ACTTTGCATTACTTTCTTCTACAACTCCATTCCCTTGATAAAACTTTATCAATCTCCTCG
AAAACTGTTCCTACTCCAAGAAGTCGTCACAGCAAGAATAGACAGATAGGGAGCTGCTCC
TACTTTGATCACACGCGTTCAGCCATCCAAGTAGCTGTACAACATGTATCAGAAGTTGCT
GCTTATCGTCTCATTTTCTTCGATTCTCACTGTGTATTCTATGGTAACCTCTATATCAGG
GACGTTGAGAGCACACGTATACGACCAGCATTAAGGGCACTCAAGCAAAACCTCACTCTT
TTATGCGCGATCCTCACTGACAAGGCTCAGCCATTGGCCTTAAAAGAAGTGATGAAGGCT
TCATTTGAGGCCTACCTCATGGTTCTACTAGCCGGAGGAAGCAAAAGACTCTTTTCGAGA
GCTGATCATCAGATAATAGAAGAGGACTTTGAGAGCCTAAAGAGGGTGTTCTGTACTTGT
GGTGAAGGATTGGTAGTAGAGGATGTTGTGGACACAGAAGCTGAGACGGTCGAGGGGGTG
ATAGCTTTAATGGGACAATCAACTGAGCAATTGGTTGAAGATTTCAGCATTGTGGCATGT
GAAGCTAGTGGAATGGGAGTTGTGGGATCAGGACAGAAACTACCTATGCCTCCAACAACA
GGAAGATGGAATAGAGCAGATCCCAATACAATCTTGAGGGTAGTTTGTCATAGAAATGAC
AAAGTTGCTAATCACTTCTTGAAGAAAACATTCCAATTAGCAAAAAGGAGGCCATATTAG