Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044179
CDS Infomation

pacid=37455410 polypeptide=PGSC0003DMP400029955 locus=PGSC0003DMG400017149 ID=PGSC0003DMT400044179.v4.03 annot-version=v4.03
Sequence

ATGGAACGCAGAAACATGGACAAGGATGGACCTAATAAAGAAGGTTTATTGCAGTTTGTG
AACAAGGAAGAACAAGCAGAGGAGAATAGTTGTTTGTCGACAAGATTAATAGAAGAGTTA
GAACCACAGCACCTACTTAGATTAGGAAACCCGCGCTTTACAGGAAATTGCACTCAGAAA
TTGTTCTTTCATAGTTCTCTTGGCTTACAAAATAAGCTTCCAAAGCATATAATAAGTTTT
GACGAAAGATACTTCCTTCGCTGCCTTGAATTGGTACACATACATTCCACATGTAACTTC
TCTTCAAAGATGCAAATTTTATCAAAGAGTTCAGGTTCAAGAGAGGTTAGAAATGAAAAT
CTCTGCACTAATGGTAATCTGGCTATCGAATGCCCTCAAACTGTGGGGATTGAGTCAAGT
TATGTCCCTGACTCCTCCGCGGAGTGGATTCTTGGTGCAATAACTGGTAGTAAGAGTATG
CTGAACATTTTAAAGAGTCCTTTACTTAATCAATTTGGATCTGTTAACTGTACTGTTGAT
TCTGGAAAGGAAAATATACATGACAGTGAAGAAGCAAGTTTTTCTGATTTCATGAGCTCT
CCCGGTGGTTTTAGTGTCAGTTCAGCACAGAAGCTACAGAAGGAGATGGCAGATCATGCA
TATGGATCTGAGCATGTACACAGAAGGGTTCTTTCTGTATCTAGTACAGCTTCGACATGC
TCGGATCAATCTTGTCTTTCAGCGGCTTCCCCTATTTCTCAAGGAATGCTCCAGAGGAGA
TGGAAAAATGGTTTACCACATTATGTCTTTTCCATAGATGGTAAAAAGGAAGTTTATGTA
GCTGATTTGCTGAAGATCGACTCACCTGATGATAAGTTTCTCGATTATGTTTACACATTT
CATTCAAGACCAGAAGGCAAAAAGGAACGCGCCTTCTCTGCAAGGGAATCACAACTTGTA
GGTAAAATGACTGTGTCAACTTCAGTGACACTCAGCTCAACCAAGCTGGAGATTATGGAG
ACGCGATTTGTTGTGTTTGGTTCCATGGATCAATATATGGATGAGATACAATCAAGTCAT
ATCCTCAGGAAGAACAAAAAATTGGCAAAGAAAGTGACAGATGTGTTCAGAACTAGTCAG
TCTTATAAGCAGAGAAGCTTATCCAAGTTCGGGGGAACAAGCGCCATTCTTGAAGATGCT
TCTTGGACGCCATCCATAGATATGTATGATGATTATTATTCATGCGGCAATGCTCTTTTA
GATCAACAGATTCCGCCAAATTTTGAGTTGGCTGCCATTGTTACCAGAGATCCTCTTAAT
GACAGCTCCAAGGAGGCAGAGAAGGGTGGCTGGGGTATGAAGTTTCTCAAGAAATCTCCG
ACTGGAAGTAAAAATGCACCTCCTGAGATATCGGTGGAATGTCGTTCACGTGGCACCAGT
GAATGCTCAACAAGCACGGATGTTATAATTCCAAGTGGTTTTCACGGTGGACCTAGAAGC
AGACATGCTGGGCCGTCAAGCCTGTTGGAGCGGTGGAGCTCTGGTGGGCACTGTGATTGT
GGAGGCTGGGATCTCGGGTGCCCCCTCACAGTTCTTAACACTGGAAATGAAGCTTCATCA
CAAACTACATCTGGAGACTGTCAAACTTTTGATCTCTATATACAGGGTTCAAAACAAAGT
GCACCAGTCATGAAAATGTCGAATATTCATGATGGTTTGTATTACATCCATTTTCATTCG
ACTCTATCAGCTTTGCAGTCTTTTGCCATAGCTGCTGCTTTCATTCATAGACATAGTCCT
TTCCTACGACCGAAACTGTACAGGAAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029955
PEP Infomation

pacid=37455410 transcript=PGSC0003DMT400044179 locus=PGSC0003DMG400017149 ID=PGSC0003DMT400044179.v4.03 annot-version=v4.03
Sequence

MERRNMDKDGPNKEGLLQFVNKEEQAEENSCLSTRLIEELEPQHLLRLGNPRFTGNCTQK
LFFHSSLGLQNKLPKHIISFDERYFLRCLELVHIHSTCNFSSKMQILSKSSGSREVRNEN
LCTNGNLAIECPQTVGIESSYVPDSSAEWILGAITGSKSMLNILKSPLLNQFGSVNCTVD
SGKENIHDSEEASFSDFMSSPGGFSVSSAQKLQKEMADHAYGSEHVHRRVLSVSSTASTC
SDQSCLSAASPISQGMLQRRWKNGLPHYVFSIDGKKEVYVADLLKIDSPDDKFLDYVYTF
HSRPEGKKERAFSARESQLVGKMTVSTSVTLSSTKLEIMETRFVVFGSMDQYMDEIQSSH
ILRKNKKLAKKVTDVFRTSQSYKQRSLSKFGGTSAILEDASWTPSIDMYDDYYSCGNALL
DQQIPPNFELAAIVTRDPLNDSSKEAEKGGWGMKFLKKSPTGSKNAPPEISVECRSRGTS
ECSTSTDVIIPSGFHGGPRSRHAGPSSLLERWSSGGHCDCGGWDLGCPLTVLNTGNEASS
QTTSGDCQTFDLYIQGSKQSAPVMKMSNIHDGLYYIHFHSTLSALQSFAIAAAFIHRHSP
FLRPKLYRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400044179
Transcript Infomation

pacid=37455410 locus=PGSC0003DMG400017149 ID=PGSC0003DMT400044179.v4.03 annot-version=v4.03
Sequence

ATGGAACGCAGAAACATGGACAAGGATGGACCTAATAAAGAAGGTTTATTGCAGTTTGTG
AACAAGGAAGAACAAGCAGAGGAGAATAGTTGTTTGTCGACAAGATTAATAGAAGAGTTA
GAACCACAGCACCTACTTAGATTAGGAAACCCGCGCTTTACAGGAAATTGCACTCAGAAA
TTGTTCTTTCATAGTTCTCTTGGCTTACAAAATAAGCTTCCAAAGCATATAATAAGTTTT
GACGAAAGATACTTCCTTCGCTGCCTTGAATTGGTACACATACATTCCACATGTAACTTC
TCTTCAAAGATGCAAATTTTATCAAAGAGTTCAGGTTCAAGAGAGGTTAGAAATGAAAAT
CTCTGCACTAATGGTAATCTGGCTATCGAATGCCCTCAAACTGTGGGGATTGAGTCAAGT
TATGTCCCTGACTCCTCCGCGGAGTGGATTCTTGGTGCAATAACTGGTAGTAAGAGTATG
CTGAACATTTTAAAGAGTCCTTTACTTAATCAATTTGGATCTGTTAACTGTACTGTTGAT
TCTGGAAAGGAAAATATACATGACAGTGAAGAAGCAAGTTTTTCTGATTTCATGAGCTCT
CCCGGTGGTTTTAGTGTCAGTTCAGCACAGAAGCTACAGAAGGAGATGGCAGATCATGCA
TATGGATCTGAGCATGTACACAGAAGGGTTCTTTCTGTATCTAGTACAGCTTCGACATGC
TCGGATCAATCTTGTCTTTCAGCGGCTTCCCCTATTTCTCAAGGAATGCTCCAGAGGAGA
TGGAAAAATGGTTTACCACATTATGTCTTTTCCATAGATGGTAAAAAGGAAGTTTATGTA
GCTGATTTGCTGAAGATCGACTCACCTGATGATAAGTTTCTCGATTATGTTTACACATTT
CATTCAAGACCAGAAGGCAAAAAGGAACGCGCCTTCTCTGCAAGGGAATCACAACTTGTA
GGTAAAATGACTGTGTCAACTTCAGTGACACTCAGCTCAACCAAGCTGGAGATTATGGAG
ACGCGATTTGTTGTGTTTGGTTCCATGGATCAATATATGGATGAGATACAATCAAGTCAT
ATCCTCAGGAAGAACAAAAAATTGGCAAAGAAAGTGACAGATGTGTTCAGAACTAGTCAG
TCTTATAAGCAGAGAAGCTTATCCAAGTTCGGGGGAACAAGCGCCATTCTTGAAGATGCT
TCTTGGACGCCATCCATAGATATGTATGATGATTATTATTCATGCGGCAATGCTCTTTTA
GATCAACAGATTCCGCCAAATTTTGAGTTGGCTGCCATTGTTACCAGAGATCCTCTTAAT
GACAGCTCCAAGGAGGCAGAGAAGGGTGGCTGGGGTATGAAGTTTCTCAAGAAATCTCCG
ACTGGAAGTAAAAATGCACCTCCTGAGATATCGGTGGAATGTCGTTCACGTGGCACCAGT
GAATGCTCAACAAGCACGGATGTTATAATTCCAAGTGGTTTTCACGGTGGACCTAGAAGC
AGACATGCTGGGCCGTCAAGCCTGTTGGAGCGGTGGAGCTCTGGTGGGCACTGTGATTGT
GGAGGCTGGGATCTCGGGTGCCCCCTCACAGTTCTTAACACTGGAAATGAAGCTTCATCA
CAAACTACATCTGGAGACTGTCAAACTTTTGATCTCTATATACAGGGTTCAAAACAAAGT
GCACCAGTCATGAAAATGTCGAATATTCATGATGGTTTGTATTACATCCATTTTCATTCG
ACTCTATCAGCTTTGCAGTCTTTTGCCATAGCTGCTGCTTTCATTCATAGACATAGTCCT
TTCCTACGACCGAAACTGTACAGGAAGTGA