Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044164
CDS Infomation

pacid=37457843 polypeptide=PGSC0003DMP400029943 locus=PGSC0003DMG400017144 ID=PGSC0003DMT400044164.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTTCTGCTTGTGCGATGTTACATCGTTCCTCAATTTCAGGTCCTGTGCGACTG
ATGACGACAGCCACACAAAGTATTGCTGCTAAGCTGAGCAGCTCTGGATTGTTGCGGAGT
CAGGCTCTTATTGGAGGGAAATGGGTTGATGCATATGATGGGAAGACTATAAAGGTCCAC
AATCCTGCAACAGGGGAGGTAATAACAGATGTGCCATGCATGGGCGGGAGGGAGACGAAT
GATGCAATTTCTTCTGCCTATGATGCATTTAGTTCATGGAGCAAACTTACTGCCGCTGAA
AGGAGCAAATATTTAAGGAAGTGGTATGATTTGATAATGGCCCATAAAGAAGAACTTGGA
CAGCTTATGACACTAGAGCAAGGGAAGCCTCTGAAAGAGGCCATTGGTGAAGTTAGTTAT
GGGGCTGGTTTTATTGAGTTCTCCGCTGAAGAGGGTAAGCGTATATATGGTGACATCATT
CCATCACCATTAGCAGATAGGCGGTTATTTGTTTTAAAGCAACCAGTTGGTGTTGTTGGT
GCAATTACTCCGTGGAATTTTCCCCTGGCTATGATTACCCGAAAAGTTGGCCCTGCTCTT
GCTTGTGGTTGTACAGTGGTGATAAAACCATCTGAACTCACACCCTTGACTGCTTTAGCA
GCAGCTGAACTCTCCATTCAAGCTGGAATACCACCGGGCGTAGTGAATGTTGTTATGGGA
AATGCACCTGCTATTGGAGACGCACTGCTTGCAAGCCCACAGGTAAGAAAAATTACATTC
ACAGGTTCAACCAAGGTTGGGAAAAAATTGATGGAAGGTGCTGCTGCCACCGTCAAAAAG
GTATCTCTTGAGCTAGGCGGTAATGCACCTTGCATCATCTTTGATGACGCAGATCTTGAA
GTAGCTTTAAAAGGAGCTCTGGCAACAAAGTTCCGTAACACCGGACAAACATGTGTATGC
GCGAACAGAATACTTGTGCAAGAAGGGATATATGATAAATTCGCAAATGCTTTTGCAAAA
GCTGTCCAAAACATGAAAGTTGGAGATGGTTTCACTGAAGGTGTGGAGCAAGGCCCTCTA
ATCAATGAAGCAGCAGTACAGAAGGTTGAGTCTTTTGTAGAAGAAGCTACTTCAAAGGGA
GCCAAAGTCCTCGTTGGTGGGAAGAGACACAGCCTTGGCATGACTTTCTACGAGCCTACA
GTCGTAACTGGAGTTAACAGTGAGATGCTCTTGGCGAAAGAGGAAGTATTTGGGCCAGTC
GCCCCTCTTTTGAAGTTCAAAACAGACGAAGAAGCAATCCAAATGGCTAACGACACCAAT
GCTGGTTTAGCTGCTTACATATTCTCAACAAACATTAAAAGAGCTTGGCGTGTTACTGAA
GCTCTCGAATATGGAATTGTCGGAGTTAATGAAGGACTAGTTTCAACCGAGGTAGCTCCA
TTCGGAGGCGTGAAACAATCAGGTCTTGGCCGCGAAGGTTCTAAATACGGGATGGATGAA
TATTTAGAGATGAAATATGTGTGCTTGGGAAGTATGAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029943
PEP Infomation

pacid=37457843 transcript=PGSC0003DMT400044164 locus=PGSC0003DMG400017144 ID=PGSC0003DMT400044164.v4.03 annot-version=v4.03
Sequence

MALSACAMLHRSSISGPVRLMTTATQSIAAKLSSSGLLRSQALIGGKWVDAYDGKTIKVH
NPATGEVITDVPCMGGRETNDAISSAYDAFSSWSKLTAAERSKYLRKWYDLIMAHKEELG
QLMTLEQGKPLKEAIGEVSYGAGFIEFSAEEGKRIYGDIIPSPLADRRLFVLKQPVGVVG
AITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPPGVVNVVMG
NAPAIGDALLASPQVRKITFTGSTKVGKKLMEGAAATVKKVSLELGGNAPCIIFDDADLE
VALKGALATKFRNTGQTCVCANRILVQEGIYDKFANAFAKAVQNMKVGDGFTEGVEQGPL
INEAAVQKVESFVEEATSKGAKVLVGGKRHSLGMTFYEPTVVTGVNSEMLLAKEEVFGPV
APLLKFKTDEEAIQMANDTNAGLAAYIFSTNIKRAWRVTEALEYGIVGVNEGLVSTEVAP
FGGVKQSGLGREGSKYGMDEYLEMKYVCLGSMS*

Transcript Sequence

Transcript ID

PGSC0003DMT400044164
Transcript Infomation

pacid=37457843 locus=PGSC0003DMG400017144 ID=PGSC0003DMT400044164.v4.03 annot-version=v4.03
Sequence

ATGGCTCTTTCTGCTTGTGCGATGTTACATCGTTCCTCAATTTCAGGTCCTGTGCGACTG
ATGACGACAGCCACACAAAGTATTGCTGCTAAGCTGAGCAGCTCTGGATTGTTGCGGAGT
CAGGCTCTTATTGGAGGGAAATGGGTTGATGCATATGATGGGAAGACTATAAAGGTCCAC
AATCCTGCAACAGGGGAGGTAATAACAGATGTGCCATGCATGGGCGGGAGGGAGACGAAT
GATGCAATTTCTTCTGCCTATGATGCATTTAGTTCATGGAGCAAACTTACTGCCGCTGAA
AGGAGCAAATATTTAAGGAAGTGGTATGATTTGATAATGGCCCATAAAGAAGAACTTGGA
CAGCTTATGACACTAGAGCAAGGGAAGCCTCTGAAAGAGGCCATTGGTGAAGTTAGTTAT
GGGGCTGGTTTTATTGAGTTCTCCGCTGAAGAGGGTAAGCGTATATATGGTGACATCATT
CCATCACCATTAGCAGATAGGCGGTTATTTGTTTTAAAGCAACCAGTTGGTGTTGTTGGT
GCAATTACTCCGTGGAATTTTCCCCTGGCTATGATTACCCGAAAAGTTGGCCCTGCTCTT
GCTTGTGGTTGTACAGTGGTGATAAAACCATCTGAACTCACACCCTTGACTGCTTTAGCA
GCAGCTGAACTCTCCATTCAAGCTGGAATACCACCGGGCGTAGTGAATGTTGTTATGGGA
AATGCACCTGCTATTGGAGACGCACTGCTTGCAAGCCCACAGGTAAGAAAAATTACATTC
ACAGGTTCAACCAAGGTTGGGAAAAAATTGATGGAAGGTGCTGCTGCCACCGTCAAAAAG
GTATCTCTTGAGCTAGGCGGTAATGCACCTTGCATCATCTTTGATGACGCAGATCTTGAA
GTAGCTTTAAAAGGAGCTCTGGCAACAAAGTTCCGTAACACCGGACAAACATGTGTATGC
GCGAACAGAATACTTGTGCAAGAAGGGATATATGATAAATTCGCAAATGCTTTTGCAAAA
GCTGTCCAAAACATGAAAGTTGGAGATGGTTTCACTGAAGGTGTGGAGCAAGGCCCTCTA
ATCAATGAAGCAGCAGTACAGAAGGTTGAGTCTTTTGTAGAAGAAGCTACTTCAAAGGGA
GCCAAAGTCCTCGTTGGTGGGAAGAGACACAGCCTTGGCATGACTTTCTACGAGCCTACA
GTCGTAACTGGAGTTAACAGTGAGATGCTCTTGGCGAAAGAGGAAGTATTTGGGCCAGTC
GCCCCTCTTTTGAAGTTCAAAACAGACGAAGAAGCAATCCAAATGGCTAACGACACCAAT
GCTGGTTTAGCTGCTTACATATTCTCAACAAACATTAAAAGAGCTTGGCGTGTTACTGAA
GCTCTCGAATATGGAATTGTCGGAGTTAATGAAGGACTAGTTTCAACCGAGGTAGCTCCA
TTCGGAGGCGTGAAACAATCAGGTCTTGGCCGCGAAGGTTCTAAATACGGGATGGATGAA
TATTTAGAGATGAAATATGTGTGCTTGGGAAGTATGAGCTAA