Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044109
CDS Infomation

pacid=37458850 polypeptide=PGSC0003DMP400029908 locus=PGSC0003DMG400017116 ID=PGSC0003DMT400044109.v4.03 annot-version=v4.03
Sequence

ATGGATTTAGACCCAGATTACAATCCCAGTTTTAAGGCCAAGATCAACACCAAATGGGTA
GCTACAGTCGCTAGTATATGGATCCAATGTACCAGCGGTTCACTCTACACATTCGCCATT
TATTCTTCCATTCTCAAATCTACCCAAGGATACGATCAATCATCCCTCAATGTCGTCTCC
GTATTCAAAGATGTCGGCGCTAATGTCGGCATACTTTCCGGCTTACTTTATTCATCAGTC
ACCGGTCGCCGCCGCCGTTGTGGTGGGCCATGGGTGGTGCTACTTGCCGGAGCTATTCAG
TGCTTTGCTGGGTATTATCTTATGTGGTTGACCGTTATGGGGCTTCTACCTAAACCCCCT
TTATGGGTTATGTGCCTCTATATGCTTTTAGCTGCTCATGCTATGACTTTCTTCAATACG
GCAAACGTTGTTACTGCTGTGCACAATTTCCCTAATTATAGAGGCACCATTGTTGGCATC
ATGAAGGGTTTTCTCGGGTTGAGTGGAGCAATATTAATTCAAGTATATCAGACAATCTTT
AGAAACAGGCCCACTGCATATCTTCTGTTGTTGGCGTTGTTGCCTCCTATTACTACTCTG
TTACTTATGTCATTCGTAACAATCTCGCAAGCAAATGAAGATGATGAGAAGAAGCATCTT
AATGGTTTATCATTGATTGCTCTGGTACTGGCTTCTTATCTCATGGCTGAAATCATTGTG
GGAAACATCTTCTCTTTACAACTGTCCGTTCGCATCATTACTTTTACTATACTCATTTTC
TTGCTGCTTTCCCCGATTTCTGTTGCGATCAGTGCCCACAAGGAAAAGTCTTATAGAATA
ATTAAATACTTACTCGAGCAAAACTCACCGGAGGATGAGCAGCATAGATCTCAGGCATAT
TTTGTGGACATGGGGCAAAGTCATGGAAACTATGAGGAGTTGCCTGCTGGTGCTGATCAA
GGGAGAGATATGAATGAGAGGAGGACTCCAGAATGGGGGGAAAACATGAATCTTTTTCAG
GCAATGTGCACCACTGGTTTTTGGTTTTTGTTTGTCACCACTGCATGTGGAATGGGCACA
GGGCTGGCCACAGTTAATAACATTAGCCAGATAGGAGGGTCACTTGGGTACACTATCTTA
GAGACGAATACTTTAGTTTCTCTATGGAGTATCTGGAATTTTCTTGGTCGCTTTGGAGCA
GGTTATATTTCAGATTATTTCTTGCGGTCGCTAGGTTGGTCAAGGCCATTATTTATTGTT
GTTACTCTGGCTAGTATGACTGTTGGCCATGCTGTGATAGCATCTGGTCTGCCTGGTGCT
TTGTATGCAGGCTCTGTTATAGTTGGCATTTGTTATGGATCACAGTGGTCACTAATGCCC
ACAATTGCTTCTGAGATATTTGGTGCAGGGCATCTGGGAACAATATTTAACACCATAACC
GTAGCAGGCCCTGTAGGATCTTATATACTGTCTGTTTGGGTTGTCGGATACTTCTACGAT
AAGGAAGCATCAGATGAAGGGAACATGTGTACTGGAACTCACTGCTTCACGTTATCCTTC
TTTATCATGGCAGCTTCCACTTTCTTTGGGGCTCTTGTGGCCTTGGCTTTGTTCTTTCGG
ACAAGAAACTTCTACAATAATTTTGTTCACAGAAGAGGTGCAAATACCATTACTGGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029908
PEP Infomation

pacid=37458850 transcript=PGSC0003DMT400044109 locus=PGSC0003DMG400017116 ID=PGSC0003DMT400044109.v4.03 annot-version=v4.03
Sequence

MDLDPDYNPSFKAKINTKWVATVASIWIQCTSGSLYTFAIYSSILKSTQGYDQSSLNVVS
VFKDVGANVGILSGLLYSSVTGRRRRCGGPWVVLLAGAIQCFAGYYLMWLTVMGLLPKPP
LWVMCLYMLLAAHAMTFFNTANVVTAVHNFPNYRGTIVGIMKGFLGLSGAILIQVYQTIF
RNRPTAYLLLLALLPPITTLLLMSFVTISQANEDDEKKHLNGLSLIALVLASYLMAEIIV
GNIFSLQLSVRIITFTILIFLLLSPISVAISAHKEKSYRIIKYLLEQNSPEDEQHRSQAY
FVDMGQSHGNYEELPAGADQGRDMNERRTPEWGENMNLFQAMCTTGFWFLFVTTACGMGT
GLATVNNISQIGGSLGYTILETNTLVSLWSIWNFLGRFGAGYISDYFLRSLGWSRPLFIV
VTLASMTVGHAVIASGLPGALYAGSVIVGICYGSQWSLMPTIASEIFGAGHLGTIFNTIT
VAGPVGSYILSVWVVGYFYDKEASDEGNMCTGTHCFTLSFFIMAASTFFGALVALALFFR
TRNFYNNFVHRRGANTITG*

Transcript Sequence

Transcript ID

PGSC0003DMT400044109
Transcript Infomation

pacid=37458850 locus=PGSC0003DMG400017116 ID=PGSC0003DMT400044109.v4.03 annot-version=v4.03
Sequence

ATGGATTTAGACCCAGATTACAATCCCAGTTTTAAGGCCAAGATCAACACCAAATGGGTA
GCTACAGTCGCTAGTATATGGATCCAATGTACCAGCGGTTCACTCTACACATTCGCCATT
TATTCTTCCATTCTCAAATCTACCCAAGGATACGATCAATCATCCCTCAATGTCGTCTCC
GTATTCAAAGATGTCGGCGCTAATGTCGGCATACTTTCCGGCTTACTTTATTCATCAGTC
ACCGGTCGCCGCCGCCGTTGTGGTGGGCCATGGGTGGTGCTACTTGCCGGAGCTATTCAG
TGCTTTGCTGGGTATTATCTTATGTGGTTGACCGTTATGGGGCTTCTACCTAAACCCCCT
TTATGGGTTATGTGCCTCTATATGCTTTTAGCTGCTCATGCTATGACTTTCTTCAATACG
GCAAACGTTGTTACTGCTGTGCACAATTTCCCTAATTATAGAGGCACCATTGTTGGCATC
ATGAAGGGTTTTCTCGGGTTGAGTGGAGCAATATTAATTCAAGTATATCAGACAATCTTT
AGAAACAGGCCCACTGCATATCTTCTGTTGTTGGCGTTGTTGCCTCCTATTACTACTCTG
TTACTTATGTCATTCGTAACAATCTCGCAAGCAAATGAAGATGATGAGAAGAAGCATCTT
AATGGTTTATCATTGATTGCTCTGGTACTGGCTTCTTATCTCATGGCTGAAATCATTGTG
GGAAACATCTTCTCTTTACAACTGTCCGTTCGCATCATTACTTTTACTATACTCATTTTC
TTGCTGCTTTCCCCGATTTCTGTTGCGATCAGTGCCCACAAGGAAAAGTCTTATAGAATA
ATTAAATACTTACTCGAGCAAAACTCACCGGAGGATGAGCAGCATAGATCTCAGGCATAT
TTTGTGGACATGGGGCAAAGTCATGGAAACTATGAGGAGTTGCCTGCTGGTGCTGATCAA
GGGAGAGATATGAATGAGAGGAGGACTCCAGAATGGGGGGAAAACATGAATCTTTTTCAG
GCAATGTGCACCACTGGTTTTTGGTTTTTGTTTGTCACCACTGCATGTGGAATGGGCACA
GGGCTGGCCACAGTTAATAACATTAGCCAGATAGGAGGGTCACTTGGGTACACTATCTTA
GAGACGAATACTTTAGTTTCTCTATGGAGTATCTGGAATTTTCTTGGTCGCTTTGGAGCA
GGTTATATTTCAGATTATTTCTTGCGGTCGCTAGGTTGGTCAAGGCCATTATTTATTGTT
GTTACTCTGGCTAGTATGACTGTTGGCCATGCTGTGATAGCATCTGGTCTGCCTGGTGCT
TTGTATGCAGGCTCTGTTATAGTTGGCATTTGTTATGGATCACAGTGGTCACTAATGCCC
ACAATTGCTTCTGAGATATTTGGTGCAGGGCATCTGGGAACAATATTTAACACCATAACC
GTAGCAGGCCCTGTAGGATCTTATATACTGTCTGTTTGGGTTGTCGGATACTTCTACGAT
AAGGAAGCATCAGATGAAGGGAACATGTGTACTGGAACTCACTGCTTCACGTTATCCTTC
TTTATCATGGCAGCTTCCACTTTCTTTGGGGCTCTTGTGGCCTTGGCTTTGTTCTTTCGG
ACAAGAAACTTCTACAATAATTTTGTTCACAGAAGAGGTGCAAATACCATTACTGGTTAG