Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044098
CDS Infomation

pacid=37431215 polypeptide=PGSC0003DMP400029900 locus=PGSC0003DMG400017110 ID=PGSC0003DMT400044098.v4.03 annot-version=v4.03
Sequence

ATGGCTCCCAAAACACCTTCTTCTCTTCCTCTTTATGAAATTAAGTATAGAAAAAACTAT
ATATCAAGAGTAATAGAACTCTTCATTCTTTTCCTTTTGTTCTCACTTTTGGCCTATAGA
TTCCTCACTCTAAAATTTCATGGTTTACAATGGCTCTTGGCTCTTATATGTGAATCATGG
TTCACTTTCATTTGGATTCTCACCGTTAGCTCAAAATGGAATCAAGTTGAACCAACAACA
TATCCTCTACGCCTTTTGGAACGGACTTTGAAGTTTCCAGCTGTGGACATATTTGTTACA
ACAGCAGATCCCGTCCTAGAACCGCCTCTCATAACGATAAACACCGTGTTATCGTTGTTA
GCGGTGGATTATCCGGCTAATAAGCTAGCTTGTTATGTCTCAGACGATGGTGCATCAATT
GTTACGTATTATTCACTTGTTGAAGCATCAAAATTTGCTAAGCATTGGGTTCCTTTTTGT
AAGAAATATAATATTGCCCTTAGAGCCCCTTTTCGATATTTTAGTGGTAACTCATCACCA
CCACAAGATAGTTCACAAGAGTTTCAACAAGATTGGACAAGAATGAAGGATGAATATAAA
CAGTTGTGTAAAAAGATAGAAGACGCAAGTACTCAAGAACCAGAGACATGTGATTTTGAT
GTTTTCTCAAATATCCAACAAAAAAATCATCCGACCATTATAAAGGTTATATTGGAGAAC
AAGGAGGGTGTTGCTGATGGATTGCCTCATCTTGTGTACATCTCTAGAGAGAAGCGACCA
AAACATCCACATCAATTCAAAGCCGGCGCCATGAATGTTCTGACTAGAGTATCTGGAGTG
ATGACAAATGCACCATTCATGCTAAATGTGGATTGTGACATGTATGCAAATAACCCACAA
GTTGTTCTACATGCCATGTGTTATTTTCTTGGTGCTAAGGACGAGATAGACTGTGGCTTT
GTTCAATTTCCACAATTCTTTTATGATGGATTGAAAGAAGATCCTTATGGAAATCAATTA
AAAGTTTTACACGAGTATTTTGGAAGAGGAATTAGTGGTATTCAAGGGCCATTTTATCAA
GGATCGGGATGTTTCCATAGACGAAAAGTTATATATGGCTCGTCACCATATGAAAAAATA
ACTGCAGGAGAATTGAAGGATGAGTATATACAGAAAACTTATGGAATGTCAGAGAAGTTA
TCAACATCAATTGCTAAGACTCTCTTAGAAGGATCAAATATTATTGAGCAATTCAATTCT
GATTCTCCCTCAAGTTCCATTGAGATAGCACATCAAGTTGGAAGCTGTGGATTTGAATTT
GGCACTGCTTGGGGTCAAAAGTTGGGCTGGCTATATGGTAGTGTAGCAGAAGATATCCTT
ACTGGACTCTTTATCCAATCAAGAGGCTGGAAATCCGCCTACTGTTTACCCGACCCGCCT
GCCTTTCTTGGATGTGCACCTGCAGCTGGGCCTGCCTCAATGATCCAACAAAAAAGATGG
GCTACTGGGCTTTTTGAAGTTCTCCTTAACAGTAAAAGCCCAATTATTGGAACCCTTTTT
GGGAAGCTTCAATTGAGACAATGCATGGCTTATTTGCAGATCCAATTATGGGGCTTGAGA
TCCATTTTTGAAGTTTGTTATGCTATTCTGCCTGCATATTGCCTCATCACCAATTCCCAC
TTTTTACCCCAGGCAAATGAACTAAGTATAGTTATACCAGCATCAATCTTTATTATCTAC
AATCTATATGTTTTATCAGAGTATATTAGAGCAAATGAACCAATAATAGCATGGATGAAC
AATCAAAGAATGTGGAGGGTTAATGCTATGAGTGCATGGCTATTTGGTATTCTAAGTGCT
ACAACTAAATTACTTGGATTTTCTGAGACTGCATTTGAAATTACAAAAAAGGACCAAAAT
GACACAAATTCTGATATTGGAAGGTTCACATTTGATGATTCTCCAATTTTTGTGCCTGGA
ACTGCAGTTCTCTTATTGAATCTTAGTGCCTTGTTTATTGGAGTGTTGGATTTTAAGAAA
GGGAATAATATTGAATGGGGATTAGGAGAAGTTATATGCATTATGTGGATTGTTTTTGTA
TTTTGGGCATTTTTGAAGGGCTTATTTGCTAAAGGAAAGTATGGGATACCAACATCAAGT
ATTCTCAAGGCAGGGGCATTGGCATTGTTGTTAGTCCATCTTTTCAAATTTAAACAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400029900
PEP Infomation

pacid=37431215 transcript=PGSC0003DMT400044098 locus=PGSC0003DMG400017110 ID=PGSC0003DMT400044098.v4.03 annot-version=v4.03
Sequence

MAPKTPSSLPLYEIKYRKNYISRVIELFILFLLFSLLAYRFLTLKFHGLQWLLALICESW
FTFIWILTVSSKWNQVEPTTYPLRLLERTLKFPAVDIFVTTADPVLEPPLITINTVLSLL
AVDYPANKLACYVSDDGASIVTYYSLVEASKFAKHWVPFCKKYNIALRAPFRYFSGNSSP
PQDSSQEFQQDWTRMKDEYKQLCKKIEDASTQEPETCDFDVFSNIQQKNHPTIIKVILEN
KEGVADGLPHLVYISREKRPKHPHQFKAGAMNVLTRVSGVMTNAPFMLNVDCDMYANNPQ
VVLHAMCYFLGAKDEIDCGFVQFPQFFYDGLKEDPYGNQLKVLHEYFGRGISGIQGPFYQ
GSGCFHRRKVIYGSSPYEKITAGELKDEYIQKTYGMSEKLSTSIAKTLLEGSNIIEQFNS
DSPSSSIEIAHQVGSCGFEFGTAWGQKLGWLYGSVAEDILTGLFIQSRGWKSAYCLPDPP
AFLGCAPAAGPASMIQQKRWATGLFEVLLNSKSPIIGTLFGKLQLRQCMAYLQIQLWGLR
SIFEVCYAILPAYCLITNSHFLPQANELSIVIPASIFIIYNLYVLSEYIRANEPIIAWMN
NQRMWRVNAMSAWLFGILSATTKLLGFSETAFEITKKDQNDTNSDIGRFTFDDSPIFVPG
TAVLLLNLSALFIGVLDFKKGNNIEWGLGEVICIMWIVFVFWAFLKGLFAKGKYGIPTSS
ILKAGALALLLVHLFKFKQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400044098
Transcript Infomation

pacid=37431215 locus=PGSC0003DMG400017110 ID=PGSC0003DMT400044098.v4.03 annot-version=v4.03
Sequence

ATGGCTCCCAAAACACCTTCTTCTCTTCCTCTTTATGAAATTAAGTATAGAAAAAACTAT
ATATCAAGAGTAATAGAACTCTTCATTCTTTTCCTTTTGTTCTCACTTTTGGCCTATAGA
TTCCTCACTCTAAAATTTCATGGTTTACAATGGCTCTTGGCTCTTATATGTGAATCATGG
TTCACTTTCATTTGGATTCTCACCGTTAGCTCAAAATGGAATCAAGTTGAACCAACAACA
TATCCTCTACGCCTTTTGGAACGGACTTTGAAGTTTCCAGCTGTGGACATATTTGTTACA
ACAGCAGATCCCGTCCTAGAACCGCCTCTCATAACGATAAACACCGTGTTATCGTTGTTA
GCGGTGGATTATCCGGCTAATAAGCTAGCTTGTTATGTCTCAGACGATGGTGCATCAATT
GTTACGTATTATTCACTTGTTGAAGCATCAAAATTTGCTAAGCATTGGGTTCCTTTTTGT
AAGAAATATAATATTGCCCTTAGAGCCCCTTTTCGATATTTTAGTGGTAACTCATCACCA
CCACAAGATAGTTCACAAGAGTTTCAACAAGATTGGACAAGAATGAAGGATGAATATAAA
CAGTTGTGTAAAAAGATAGAAGACGCAAGTACTCAAGAACCAGAGACATGTGATTTTGAT
GTTTTCTCAAATATCCAACAAAAAAATCATCCGACCATTATAAAGGTTATATTGGAGAAC
AAGGAGGGTGTTGCTGATGGATTGCCTCATCTTGTGTACATCTCTAGAGAGAAGCGACCA
AAACATCCACATCAATTCAAAGCCGGCGCCATGAATGTTCTGACTAGAGTATCTGGAGTG
ATGACAAATGCACCATTCATGCTAAATGTGGATTGTGACATGTATGCAAATAACCCACAA
GTTGTTCTACATGCCATGTGTTATTTTCTTGGTGCTAAGGACGAGATAGACTGTGGCTTT
GTTCAATTTCCACAATTCTTTTATGATGGATTGAAAGAAGATCCTTATGGAAATCAATTA
AAAGTTTTACACGAGTATTTTGGAAGAGGAATTAGTGGTATTCAAGGGCCATTTTATCAA
GGATCGGGATGTTTCCATAGACGAAAAGTTATATATGGCTCGTCACCATATGAAAAAATA
ACTGCAGGAGAATTGAAGGATGAGTATATACAGAAAACTTATGGAATGTCAGAGAAGTTA
TCAACATCAATTGCTAAGACTCTCTTAGAAGGATCAAATATTATTGAGCAATTCAATTCT
GATTCTCCCTCAAGTTCCATTGAGATAGCACATCAAGTTGGAAGCTGTGGATTTGAATTT
GGCACTGCTTGGGGTCAAAAGTTGGGCTGGCTATATGGTAGTGTAGCAGAAGATATCCTT
ACTGGACTCTTTATCCAATCAAGAGGCTGGAAATCCGCCTACTGTTTACCCGACCCGCCT
GCCTTTCTTGGATGTGCACCTGCAGCTGGGCCTGCCTCAATGATCCAACAAAAAAGATGG
GCTACTGGGCTTTTTGAAGTTCTCCTTAACAGTAAAAGCCCAATTATTGGAACCCTTTTT
GGGAAGCTTCAATTGAGACAATGCATGGCTTATTTGCAGATCCAATTATGGGGCTTGAGA
TCCATTTTTGAAGTTTGTTATGCTATTCTGCCTGCATATTGCCTCATCACCAATTCCCAC
TTTTTACCCCAGGCAAATGAACTAAGTATAGTTATACCAGCATCAATCTTTATTATCTAC
AATCTATATGTTTTATCAGAGTATATTAGAGCAAATGAACCAATAATAGCATGGATGAAC
AATCAAAGAATGTGGAGGGTTAATGCTATGAGTGCATGGCTATTTGGTATTCTAAGTGCT
ACAACTAAATTACTTGGATTTTCTGAGACTGCATTTGAAATTACAAAAAAGGACCAAAAT
GACACAAATTCTGATATTGGAAGGTTCACATTTGATGATTCTCCAATTTTTGTGCCTGGA
ACTGCAGTTCTCTTATTGAATCTTAGTGCCTTGTTTATTGGAGTGTTGGATTTTAAGAAA
GGGAATAATATTGAATGGGGATTAGGAGAAGTTATATGCATTATGTGGATTGTTTTTGTA
TTTTGGGCATTTTTGAAGGGCTTATTTGCTAAAGGAAAGTATGGGATACCAACATCAAGT
ATTCTCAAGGCAGGGGCATTGGCATTGTTGTTAGTCCATCTTTTCAAATTTAAACAATAA