Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400044062
CDS Infomation

pacid=37440656 polypeptide=PGSC0003DMP400029879 locus=PGSC0003DMG400017095 ID=PGSC0003DMT400044062.v4.03 annot-version=v4.03
Sequence

ATGGCTAGACACGAGGAATTACCAATTCCAATTTTCTCTGATTTTGAACCTGTTTATGGT
AGTGGATCACAGCTTGAAGAGGCTCAACTTCGATTCAAGAATTTGAAAGCCAAGTTTATA
GACTTATTTGGCCAATCCCCTCATGTCTACGCTCGATCCCCAGGGAGAGTGAACCTGATT
GGAGAACACATAGACTATGAGGGTTACTCTGTTTTGCCTATGGCAATTCGGCAAGACACA
ATTGTGGCTATACGGAAACACGACTCTAATGAACCTCAGAAGCTTCTTAGAATTGCCAAT
GTGAATAGTGATAAGTACTCCTTCTGTACTTATCCTGCTGATCCTCTGCAGGAGGTTGAT
CTGAAGAATCACAGATGGGGTCATTATTTCATTTGTGGGTACAAGGGTTTCTATGAATAT
GCCAAGTTGAAAGGGATAGATGTTGGTGAACCTGTTGGACTTGATGTTATTGTTGATGGT
ACAGTTCCTACAGGGTCTGGGCTTTCGAGCTCTGCAGCATTTGTTTGCTCTTCCTTTATT
GCTATAATGGCTTCAATTGGTGTTAACATGCCCAAGAAAGAAATTGCTCAACTCACATGT
GAGTGTGAAAGGCACATCGGGACTCAGTCTGGTGGAATGGATCAGGCCATCTCTGTTATG
GCAAAATCTGGGTTTGCTGAGCTGATTGATTTCAATCCTATACGTGCAACAGATGTACAA
CTGCCTGCTGGTGGAACTTTTGTGATAGCCCATTCATTAGCTGAATCACAAAAAGCAGTT
ACTGCTGCAGTTAACTACAATAATCGGGTTGTTGAATGCCGACTAGCTGCTATTGTACTG
GGCATTAAGCTGGGGATGGAACCTAAGGAGGCGATATCTAGTGTAAAAACTCTTTCTGAT
GTTGAAGGGTTGTGTGTATCATTCGCTGGTACACACAGTTCTTCTAATCCTGTCGTTGCT
GTCAAGGAGCTATTGCATGAAGAACCATATACCAGCGAAGACATTGAGAATATCACCAAG
GAAAAGCTGGAAACAATCTTTGCCGCCTCACCAACTTCTTTGGATGTGCTTCATGCTGCT
AAGTGTTACAAGTTGCATCAGAGAGCTGCCCATGTATATTCTGAAGCCAAACGTGTGCAC
GCTTTTAAAGACACCGTATCGTCAGAATTAAGTGATGAAGACATGTTGAAGAAGTTAGGT
GACCTTATGAACGACAGTCACCATAGCTGCAGCATCCTTTATGAGTGCAGTTGTCCAGAA
TTAGAAGAACTTGTGAAGATTTGTCGAGATAATGGTGCTCTTGGAGCTAGGCTTACAGGA
GCCGGATGGGGTGGTTGTGCAGTGGCTTTGGTGAAAGAGAGTCTTGTTCCACAATTTATA
CTCAATTTGAAGGAGCAATTTTATCAATCAAGGATTGACAAAGGAACCATCAGTAAGAAT
GATCTTGGCTTGTACATTTTTGCATCCAAGCCTTCAAGTGGTGCTGCTATTTTCAAATTT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400029879
PEP Infomation

pacid=37440656 transcript=PGSC0003DMT400044062 locus=PGSC0003DMG400017095 ID=PGSC0003DMT400044062.v4.03 annot-version=v4.03
Sequence

MARHEELPIPIFSDFEPVYGSGSQLEEAQLRFKNLKAKFIDLFGQSPHVYARSPGRVNLI
GEHIDYEGYSVLPMAIRQDTIVAIRKHDSNEPQKLLRIANVNSDKYSFCTYPADPLQEVD
LKNHRWGHYFICGYKGFYEYAKLKGIDVGEPVGLDVIVDGTVPTGSGLSSSAAFVCSSFI
AIMASIGVNMPKKEIAQLTCECERHIGTQSGGMDQAISVMAKSGFAELIDFNPIRATDVQ
LPAGGTFVIAHSLAESQKAVTAAVNYNNRVVECRLAAIVLGIKLGMEPKEAISSVKTLSD
VEGLCVSFAGTHSSSNPVVAVKELLHEEPYTSEDIENITKEKLETIFAASPTSLDVLHAA
KCYKLHQRAAHVYSEAKRVHAFKDTVSSELSDEDMLKKLGDLMNDSHHSCSILYECSCPE
LEELVKICRDNGALGARLTGAGWGGCAVALVKESLVPQFILNLKEQFYQSRIDKGTISKN
DLGLYIFASKPSSGAAIFKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400044062
Transcript Infomation

pacid=37440656 locus=PGSC0003DMG400017095 ID=PGSC0003DMT400044062.v4.03 annot-version=v4.03
Sequence

ATGGCTAGACACGAGGAATTACCAATTCCAATTTTCTCTGATTTTGAACCTGTTTATGGT
AGTGGATCACAGCTTGAAGAGGCTCAACTTCGATTCAAGAATTTGAAAGCCAAGTTTATA
GACTTATTTGGCCAATCCCCTCATGTCTACGCTCGATCCCCAGGGAGAGTGAACCTGATT
GGAGAACACATAGACTATGAGGGTTACTCTGTTTTGCCTATGGCAATTCGGCAAGACACA
ATTGTGGCTATACGGAAACACGACTCTAATGAACCTCAGAAGCTTCTTAGAATTGCCAAT
GTGAATAGTGATAAGTACTCCTTCTGTACTTATCCTGCTGATCCTCTGCAGGAGGTTGAT
CTGAAGAATCACAGATGGGGTCATTATTTCATTTGTGGGTACAAGGGTTTCTATGAATAT
GCCAAGTTGAAAGGGATAGATGTTGGTGAACCTGTTGGACTTGATGTTATTGTTGATGGT
ACAGTTCCTACAGGGTCTGGGCTTTCGAGCTCTGCAGCATTTGTTTGCTCTTCCTTTATT
GCTATAATGGCTTCAATTGGTGTTAACATGCCCAAGAAAGAAATTGCTCAACTCACATGT
GAGTGTGAAAGGCACATCGGGACTCAGTCTGGTGGAATGGATCAGGCCATCTCTGTTATG
GCAAAATCTGGGTTTGCTGAGCTGATTGATTTCAATCCTATACGTGCAACAGATGTACAA
CTGCCTGCTGGTGGAACTTTTGTGATAGCCCATTCATTAGCTGAATCACAAAAAGCAGTT
ACTGCTGCAGTTAACTACAATAATCGGGTTGTTGAATGCCGACTAGCTGCTATTGTACTG
GGCATTAAGCTGGGGATGGAACCTAAGGAGGCGATATCTAGTGTAAAAACTCTTTCTGAT
GTTGAAGGGTTGTGTGTATCATTCGCTGGTACACACAGTTCTTCTAATCCTGTCGTTGCT
GTCAAGGAGCTATTGCATGAAGAACCATATACCAGCGAAGACATTGAGAATATCACCAAG
GAAAAGCTGGAAACAATCTTTGCCGCCTCACCAACTTCTTTGGATGTGCTTCATGCTGCT
AAGTGTTACAAGTTGCATCAGAGAGCTGCCCATGTATATTCTGAAGCCAAACGTGTGCAC
GCTTTTAAAGACACCGTATCGTCAGAATTAAGTGATGAAGACATGTTGAAGAAGTTAGGT
GACCTTATGAACGACAGTCACCATAGCTGCAGCATCCTTTATGAGTGCAGTTGTCCAGAA
TTAGAAGAACTTGTGAAGATTTGTCGAGATAATGGTGCTCTTGGAGCTAGGCTTACAGGA
GCCGGATGGGGTGGTTGTGCAGTGGCTTTGGTGAAAGAGAGTCTTGTTCCACAATTTATA
CTCAATTTGAAGGAGCAATTTTATCAATCAAGGATTGACAAAGGAACCATCAGTAAGAAT
GATCTTGGCTTGTACATTTTTGCATCCAAGCCTTCAAGTGGTGCTGCTATTTTCAAATTT
TAG