Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043940
CDS Infomation

pacid=37435992 polypeptide=PGSC0003DMP400029803 locus=PGSC0003DMG400017053 ID=PGSC0003DMT400043940.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCATCTCCTAGTCCACTTGCAAGATTATCACTTGAGCGTAGACCCAAATTA
CTTAAAGAATTTCTTCTTCAAGACGATCCATATTCATCTAATGATTTTGGATCATACCCT
AAAACATGCATTCATGGTTCAAGAATTATTAGGTCAAACAAAGGCTCATCTCATCAATTA
CTTAGAAGTCGATCATCTAGAGCCGCAACTGCTACAATCTCCGCTATTAACAAGGTCATC
AACATTGTTAAGTTCTTACCTTTTACCTCTGTGAAATCTCCTTCCATTTTCCCTAGAAGC
ATTTCAAGAAAACTATCAAGGAGGAATAACTACAAAAAAAGTCAAAAACATAACGTTGAC
CAAGATGTCTCAGTTAAAGTCAAAGTCAAAGACATCTTACGATGGAAATCATTTAGAGAC
TTAGAAGAGAAATCTACGCCGTTAGATTCTTCTTATTCACCGTATAGGTGCGGTACAATC
ACGACCACGACCACGAGCAGCAAGAGAACAAGTTGGTGCGATAGCGATTTTACTGCGGAG
GATTTACCGTCATGGTGGGGTGAAAATGGTGAATTTTTGGGTAGAAAGAATAGTGTCGGT
GGATATTGCATGGAAACCACAAAATCAATTATTAATAAGGAAGAGTTGTGTTTTGATGAG
AATGAGCAATATAGCCCAGTTTCAATTCTTGAATCTCCATTTCAAGAAGATGATGATGAA
GGAATTATGGCCTTCTCTTTCCAGAAAAGAAAAAGCATGCTTATGCAAAGAATTCAACAA
TTTGAGAGTCTTGCTGAAGAAAACATCAACTCTAAAGGAGTAGAAGAACTAAAAGAAGAT
GAAGAAATTCAAGAAAAGGCAAAGCAATTGTTGATCAATTGTGAAGTAAACTATATGGAT
GATGATCAACTTCTCTTTGATTTCTTTTGGAATGAATTGATTACAAGTGGAAAACATCAA
AACAATGTTAATATTGATGAAAAGCTATTGAGAGAGGCAAAATCTTGGATCAATGATGAT
TACAATGAGGAATTTGAATGGGAAATTGAGGATAAAAGAGATGCCTATATAAAAGACATG
GAAAAAGTAGCAAATTGGAACAAGTTTGAAGAGGAAAAACAAGACTTTATCTTGGATTTG
GAGTTTGAAGTGTTTAATGATTTGGTCAATGAAGTCTTGGAAGATGTTTTTTCTCATAAT
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400029803
PEP Infomation

pacid=37435992 transcript=PGSC0003DMT400043940 locus=PGSC0003DMG400017053 ID=PGSC0003DMT400043940.v4.03 annot-version=v4.03
Sequence

MASSSPSPLARLSLERRPKLLKEFLLQDDPYSSNDFGSYPKTCIHGSRIIRSNKGSSHQL
LRSRSSRAATATISAINKVINIVKFLPFTSVKSPSIFPRSISRKLSRRNNYKKSQKHNVD
QDVSVKVKVKDILRWKSFRDLEEKSTPLDSSYSPYRCGTITTTTTSSKRTSWCDSDFTAE
DLPSWWGENGEFLGRKNSVGGYCMETTKSIINKEELCFDENEQYSPVSILESPFQEDDDE
GIMAFSFQKRKSMLMQRIQQFESLAEENINSKGVEELKEDEEIQEKAKQLLINCEVNYMD
DDQLLFDFFWNELITSGKHQNNVNIDEKLLREAKSWINDDYNEEFEWEIEDKRDAYIKDM
EKVANWNKFEEEKQDFILDLEFEVFNDLVNEVLEDVFSHN*

Transcript Sequence

Transcript ID

PGSC0003DMT400043940
Transcript Infomation

pacid=37435992 locus=PGSC0003DMG400017053 ID=PGSC0003DMT400043940.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCATCTCCTAGTCCACTTGCAAGATTATCACTTGAGCGTAGACCCAAATTA
CTTAAAGAATTTCTTCTTCAAGACGATCCATATTCATCTAATGATTTTGGATCATACCCT
AAAACATGCATTCATGGTTCAAGAATTATTAGGTCAAACAAAGGCTCATCTCATCAATTA
CTTAGAAGTCGATCATCTAGAGCCGCAACTGCTACAATCTCCGCTATTAACAAGGTCATC
AACATTGTTAAGTTCTTACCTTTTACCTCTGTGAAATCTCCTTCCATTTTCCCTAGAAGC
ATTTCAAGAAAACTATCAAGGAGGAATAACTACAAAAAAAGTCAAAAACATAACGTTGAC
CAAGATGTCTCAGTTAAAGTCAAAGTCAAAGACATCTTACGATGGAAATCATTTAGAGAC
TTAGAAGAGAAATCTACGCCGTTAGATTCTTCTTATTCACCGTATAGGTGCGGTACAATC
ACGACCACGACCACGAGCAGCAAGAGAACAAGTTGGTGCGATAGCGATTTTACTGCGGAG
GATTTACCGTCATGGTGGGGTGAAAATGGTGAATTTTTGGGTAGAAAGAATAGTGTCGGT
GGATATTGCATGGAAACCACAAAATCAATTATTAATAAGGAAGAGTTGTGTTTTGATGAG
AATGAGCAATATAGCCCAGTTTCAATTCTTGAATCTCCATTTCAAGAAGATGATGATGAA
GGAATTATGGCCTTCTCTTTCCAGAAAAGAAAAAGCATGCTTATGCAAAGAATTCAACAA
TTTGAGAGTCTTGCTGAAGAAAACATCAACTCTAAAGGAGTAGAAGAACTAAAAGAAGAT
GAAGAAATTCAAGAAAAGGCAAAGCAATTGTTGATCAATTGTGAAGTAAACTATATGGAT
GATGATCAACTTCTCTTTGATTTCTTTTGGAATGAATTGATTACAAGTGGAAAACATCAA
AACAATGTTAATATTGATGAAAAGCTATTGAGAGAGGCAAAATCTTGGATCAATGATGAT
TACAATGAGGAATTTGAATGGGAAATTGAGGATAAAAGAGATGCCTATATAAAAGACATG
GAAAAAGTAGCAAATTGGAACAAGTTTGAAGAGGAAAAACAAGACTTTATCTTGGATTTG
GAGTTTGAAGTGTTTAATGATTTGGTCAATGAAGTCTTGGAAGATGTTTTTTCTCATAAT
TAG