Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043928
CDS Infomation

pacid=37437579 polypeptide=PGSC0003DMP400029793 locus=PGSC0003DMG400017049 ID=PGSC0003DMT400043928.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTGGCGGAAATTTCTGGGATTTGCTGAAACCCTACGCTCGAGCAGAAGGATTT
GATTTCTTGAGAAACAAACGCGTAGCTGTGGACTTGTCATATTGGATCGTTCAGCAAGAA
ACTGCACTCAAAGGCCAAATTCGAAATCCTCATATCAGACTCACTTTTTTCCGTACCATC
AACCTCTTCTCTAAGTTTGGGGCATTTCCTGTTTTTGTCACGGATGGTACTGCATCACCG
CTTAAGTCTCAGGCAAGGATTGCACGATTTTTTCGGGCATCAGGAATTGATTTATCAAGT
TTGCCAGTGGCTGAGGAAGGCATTTCAATTGAAAGGAATAAGGCATTTCAGAAATGCGAA
AAAGAATGTGTTGAGTTGCTTGAACTCCTTGGAGTGCCAGTCCTAAAAGCAAAAGGAGAA
GCGGAAGCACTCTGTGCACAGTTGAATAGAGAAGGACTAGTTGATGCTTGTATTACTTCT
GACAGTGATGCATTTCTCTTCGGAGCCAATTGTGTTATCAAAAATATGCAACCCAACTCC
AATGAACCATTTGAGTGCTATCACATATCGGATATAGAGTCTGGTCTAGGGCTGAGGAGG
AATCAGTTGATATCAATTTCGCTTTTGGTGGGAAATGACCACAACTTGACTGGTGTACCA
GGGATCGGGATTGAAACAGCAGTTCGTTTTGTCAAATCTTTTAGTGATGATGAGATCTTG
TATAGGTTGCGGGAAATAGGTGGAGGGGATCTACAGGATTTTCAGCATGACGTCAACTTA
GGCAGTAGTTTAATACCCAGTTCAGATGAGAGCCCTCGGAAAACCAAAGTGCCACATTGT
TCAATCTGTGGACATCCTGGAAGCAAGAAAGCTCACCTCAAGTTCGCTTGTCAGTACTGC
AGTGCCACCGCCAATGAGGGTTGCATTAAGAAGCCATTGGGCTTCAAGTGTAATTGCTCC
CCATGTGATTTGGATAATAAGGAAAAAGAACAGAAAAGAAACGAGAATTGGAAGCTTAAA
GTTTGCAGAAGGATAGCCTCGGAGCAGAATTTCCGAAACAATGAGATCACAGAAATGTAC
TTGAACAAACAACAGCAATATGATGGTGATTATCATTTATCATGGGAAAATCCAAAGATT
GATATGATAGTTGATTATCTGGCTTATTATCAGCACTGGGAGCCATCTTATACACGTCAA
AGAATGTTTCCTATGTTATCCACCATATATCTGAGAGACGTGGCCTCAAATTCCAAAGAT
CAATTGTTAGGCGGACAATATGAATTTGACTCCATTCAGCGGGTGAAGACAAGATTTGGA
CATCAACTTTACGTAATCAATTGGAAGAAACCAACACGTGAAATGAGCAATGTAATCTTC
ATACCTTCTGAAGACTCTGATACGGAACAGGAGCTGGGGATAGCTGGTGAGTCCACAGAT
TTACTTGATGAACCTGATTCTCCGCAGATTCATGTCAAGGAGGGATGCAGCTTTTTGTCA
ACGGAAGAAGATATGGTGCTTGTACAGAATGCTTTTCCAGAAAAGGTGTCTCAGTTCTTG
AGAGACAAGGAACTAAAAGAATCAAGATCACGTAGAAAAAGGCCAATGAAGTCTGAGAAT
TCAGAATCACCGGAAGGTGTTCAACTCAGCATCACTAGCTTCTATCGATCATCCAAAGTC
CCTTGTCATGAGAAGCTAGAGGAGAGTGAAACTGGATGTCCAAAGATTAGTGCGGATACT
TCTAGAGAAAGAGATAATGAACCCATCCGAAACTACTCCAAGTCAGTTAGACGCAAGCTT
TTGTTCGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029793
PEP Infomation

pacid=37437579 transcript=PGSC0003DMT400043928 locus=PGSC0003DMG400017049 ID=PGSC0003DMT400043928.v4.03 annot-version=v4.03
Sequence

MGVGGNFWDLLKPYARAEGFDFLRNKRVAVDLSYWIVQQETALKGQIRNPHIRLTFFRTI
NLFSKFGAFPVFVTDGTASPLKSQARIARFFRASGIDLSSLPVAEEGISIERNKAFQKCE
KECVELLELLGVPVLKAKGEAEALCAQLNREGLVDACITSDSDAFLFGANCVIKNMQPNS
NEPFECYHISDIESGLGLRRNQLISISLLVGNDHNLTGVPGIGIETAVRFVKSFSDDEIL
YRLREIGGGDLQDFQHDVNLGSSLIPSSDESPRKTKVPHCSICGHPGSKKAHLKFACQYC
SATANEGCIKKPLGFKCNCSPCDLDNKEKEQKRNENWKLKVCRRIASEQNFRNNEITEMY
LNKQQQYDGDYHLSWENPKIDMIVDYLAYYQHWEPSYTRQRMFPMLSTIYLRDVASNSKD
QLLGGQYEFDSIQRVKTRFGHQLYVINWKKPTREMSNVIFIPSEDSDTEQELGIAGESTD
LLDEPDSPQIHVKEGCSFLSTEEDMVLVQNAFPEKVSQFLRDKELKESRSRRKRPMKSEN
SESPEGVQLSITSFYRSSKVPCHEKLEESETGCPKISADTSRERDNEPIRNYSKSVRRKL
LFD*

Transcript Sequence

Transcript ID

PGSC0003DMT400043928
Transcript Infomation

pacid=37437579 locus=PGSC0003DMG400017049 ID=PGSC0003DMT400043928.v4.03 annot-version=v4.03
Sequence

ATGGGGGTTGGCGGAAATTTCTGGGATTTGCTGAAACCCTACGCTCGAGCAGAAGGATTT
GATTTCTTGAGAAACAAACGCGTAGCTGTGGACTTGTCATATTGGATCGTTCAGCAAGAA
ACTGCACTCAAAGGCCAAATTCGAAATCCTCATATCAGACTCACTTTTTTCCGTACCATC
AACCTCTTCTCTAAGTTTGGGGCATTTCCTGTTTTTGTCACGGATGGTACTGCATCACCG
CTTAAGTCTCAGGCAAGGATTGCACGATTTTTTCGGGCATCAGGAATTGATTTATCAAGT
TTGCCAGTGGCTGAGGAAGGCATTTCAATTGAAAGGAATAAGGCATTTCAGAAATGCGAA
AAAGAATGTGTTGAGTTGCTTGAACTCCTTGGAGTGCCAGTCCTAAAAGCAAAAGGAGAA
GCGGAAGCACTCTGTGCACAGTTGAATAGAGAAGGACTAGTTGATGCTTGTATTACTTCT
GACAGTGATGCATTTCTCTTCGGAGCCAATTGTGTTATCAAAAATATGCAACCCAACTCC
AATGAACCATTTGAGTGCTATCACATATCGGATATAGAGTCTGGTCTAGGGCTGAGGAGG
AATCAGTTGATATCAATTTCGCTTTTGGTGGGAAATGACCACAACTTGACTGGTGTACCA
GGGATCGGGATTGAAACAGCAGTTCGTTTTGTCAAATCTTTTAGTGATGATGAGATCTTG
TATAGGTTGCGGGAAATAGGTGGAGGGGATCTACAGGATTTTCAGCATGACGTCAACTTA
GGCAGTAGTTTAATACCCAGTTCAGATGAGAGCCCTCGGAAAACCAAAGTGCCACATTGT
TCAATCTGTGGACATCCTGGAAGCAAGAAAGCTCACCTCAAGTTCGCTTGTCAGTACTGC
AGTGCCACCGCCAATGAGGGTTGCATTAAGAAGCCATTGGGCTTCAAGTGTAATTGCTCC
CCATGTGATTTGGATAATAAGGAAAAAGAACAGAAAAGAAACGAGAATTGGAAGCTTAAA
GTTTGCAGAAGGATAGCCTCGGAGCAGAATTTCCGAAACAATGAGATCACAGAAATGTAC
TTGAACAAACAACAGCAATATGATGGTGATTATCATTTATCATGGGAAAATCCAAAGATT
GATATGATAGTTGATTATCTGGCTTATTATCAGCACTGGGAGCCATCTTATACACGTCAA
AGAATGTTTCCTATGTTATCCACCATATATCTGAGAGACGTGGCCTCAAATTCCAAAGAT
CAATTGTTAGGCGGACAATATGAATTTGACTCCATTCAGCGGGTGAAGACAAGATTTGGA
CATCAACTTTACGTAATCAATTGGAAGAAACCAACACGTGAAATGAGCAATGTAATCTTC
ATACCTTCTGAAGACTCTGATACGGAACAGGAGCTGGGGATAGCTGGTGAGTCCACAGAT
TTACTTGATGAACCTGATTCTCCGCAGATTCATGTCAAGGAGGGATGCAGCTTTTTGTCA
ACGGAAGAAGATATGGTGCTTGTACAGAATGCTTTTCCAGAAAAGGTGTCTCAGTTCTTG
AGAGACAAGGAACTAAAAGAATCAAGATCACGTAGAAAAAGGCCAATGAAGTCTGAGAAT
TCAGAATCACCGGAAGGTGTTCAACTCAGCATCACTAGCTTCTATCGATCATCCAAAGTC
CCTTGTCATGAGAAGCTAGAGGAGAGTGAAACTGGATGTCCAAAGATTAGTGCGGATACT
TCTAGAGAAAGAGATAATGAACCCATCCGAAACTACTCCAAGTCAGTTAGACGCAAGCTT
TTGTTCGATTAG