Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043704
CDS Infomation

pacid=37443112 polypeptide=PGSC0003DMP400029655 locus=PGSC0003DMG400016973 ID=PGSC0003DMT400043704.v4.03 annot-version=v4.03
Sequence

ATGAAATTCCGATCATGGATTTCATCTTCCTCCTCCGTCAACACCGCCATCGACCACCCT
GTTCCACCACCAAAAGGGTTGTTTCCCGATGATGCAAGTAACTTCTCCGATTTACCCAGT
AGTACTACTTCACCATCATTATTTTCTCAAGAAACAAATTCTCTCAGCAGTTTACAAAGC
AATCTCTCCCTTTTAACTTTACCTTCTGTTCCTTCTCTCCAAAATCTCTCTCCTGGAACT
TTAAACCTCGCTATCTCCGCTCGTTGCTTAAATTCTCTGAATCCCAGAAATGCTCATGTC
ACTTTCCTTGCTATGCATAACAATCTGTTATATGCAGCTTCCTCAAATGAAATCAACGTT
TTCGAACTCACAAATTTCACACTTATCGATACTTTCAACAACAAAGACCCATCTTCTGGT
TTTGCAAAATCTGTTACTTTCCTCGACGGTAAAATCTTCACTGCCCATCAGGATTGTAAA
ATCCGGGTATGGAAATTAACACCCATGAAGCAGCATAACCTAATCGCAACTCTCCCGACG
CTTGAGGACCGATTACGCCGATTTGTGTTTCCGAGTAGTTATACAAATGTGAGAAGACAC
AAGAAAAAAATGTGGATCGAACATCATGATGCTGTTTCTGGGTTAGCTGTGAATGAGAAT
TTGATGTGCTCTGTTTCGTGGGATCGGTGTTTGAAAATTTGGGGAGGTTCGAAATTACGG
TGTATTGAATCGATTAAAGCTCATGATGATGCGATTAACGCTGTTGTAGTAGGGAAGGAC
GGAACAATTTTTACAGGTTCGGCTGATAAACGGATTCGAGTTTGGGGGAAACCGTATGCA
GAGAAGAAAGGTAAAATCGGGTTAATTGCGACTTTGGAGAAGCATAAATCGGCGGTGAAT
GCATTGGCGTTAAGCTCCGATGAGTCTGTGTTATTTTCCGGCGCCTGTGACCGGTCGATT
TTGGTGTGGGAAAGAGAAGACAGTGCGAATTACATGGTGGTTACTGGTGCATTGAGAGGT
CATACGAAGGCGATACTGTGTTTGATCAACGTTTCTGATTTGTTGTTTAGTGGATCGGCG
GATCGAACGGTGAGGATTTGGACACGTGGGAATCAGGGACAGTTCTGTTGTTTAACGGTA
CTTGATGGACATCGCACACCAGTGAGGTCATTGGTGGCGGCGCCGGCAGTGGCGGCTGAA
AGCGGTGGAGCTAATGGTGGTGTTAAGTTGTTTAGTGGAAGCTTTGACGGAGAAATTAAA
GTGTGGCAAATTGTGGTTTCTAGTTCAAGTGGAAGTCCTCTCATATCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029655
PEP Infomation

pacid=37443112 transcript=PGSC0003DMT400043704 locus=PGSC0003DMG400016973 ID=PGSC0003DMT400043704.v4.03 annot-version=v4.03
Sequence

MKFRSWISSSSSVNTAIDHPVPPPKGLFPDDASNFSDLPSSTTSPSLFSQETNSLSSLQS
NLSLLTLPSVPSLQNLSPGTLNLAISARCLNSLNPRNAHVTFLAMHNNLLYAASSNEINV
FELTNFTLIDTFNNKDPSSGFAKSVTFLDGKIFTAHQDCKIRVWKLTPMKQHNLIATLPT
LEDRLRRFVFPSSYTNVRRHKKKMWIEHHDAVSGLAVNENLMCSVSWDRCLKIWGGSKLR
CIESIKAHDDAINAVVVGKDGTIFTGSADKRIRVWGKPYAEKKGKIGLIATLEKHKSAVN
ALALSSDESVLFSGACDRSILVWEREDSANYMVVTGALRGHTKAILCLINVSDLLFSGSA
DRTVRIWTRGNQGQFCCLTVLDGHRTPVRSLVAAPAVAAESGGANGGVKLFSGSFDGEIK
VWQIVVSSSSGSPLIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400043704
Transcript Infomation

pacid=37443112 locus=PGSC0003DMG400016973 ID=PGSC0003DMT400043704.v4.03 annot-version=v4.03
Sequence

ATGAAATTCCGATCATGGATTTCATCTTCCTCCTCCGTCAACACCGCCATCGACCACCCT
GTTCCACCACCAAAAGGGTTGTTTCCCGATGATGCAAGTAACTTCTCCGATTTACCCAGT
AGTACTACTTCACCATCATTATTTTCTCAAGAAACAAATTCTCTCAGCAGTTTACAAAGC
AATCTCTCCCTTTTAACTTTACCTTCTGTTCCTTCTCTCCAAAATCTCTCTCCTGGAACT
TTAAACCTCGCTATCTCCGCTCGTTGCTTAAATTCTCTGAATCCCAGAAATGCTCATGTC
ACTTTCCTTGCTATGCATAACAATCTGTTATATGCAGCTTCCTCAAATGAAATCAACGTT
TTCGAACTCACAAATTTCACACTTATCGATACTTTCAACAACAAAGACCCATCTTCTGGT
TTTGCAAAATCTGTTACTTTCCTCGACGGTAAAATCTTCACTGCCCATCAGGATTGTAAA
ATCCGGGTATGGAAATTAACACCCATGAAGCAGCATAACCTAATCGCAACTCTCCCGACG
CTTGAGGACCGATTACGCCGATTTGTGTTTCCGAGTAGTTATACAAATGTGAGAAGACAC
AAGAAAAAAATGTGGATCGAACATCATGATGCTGTTTCTGGGTTAGCTGTGAATGAGAAT
TTGATGTGCTCTGTTTCGTGGGATCGGTGTTTGAAAATTTGGGGAGGTTCGAAATTACGG
TGTATTGAATCGATTAAAGCTCATGATGATGCGATTAACGCTGTTGTAGTAGGGAAGGAC
GGAACAATTTTTACAGGTTCGGCTGATAAACGGATTCGAGTTTGGGGGAAACCGTATGCA
GAGAAGAAAGGTAAAATCGGGTTAATTGCGACTTTGGAGAAGCATAAATCGGCGGTGAAT
GCATTGGCGTTAAGCTCCGATGAGTCTGTGTTATTTTCCGGCGCCTGTGACCGGTCGATT
TTGGTGTGGGAAAGAGAAGACAGTGCGAATTACATGGTGGTTACTGGTGCATTGAGAGGT
CATACGAAGGCGATACTGTGTTTGATCAACGTTTCTGATTTGTTGTTTAGTGGATCGGCG
GATCGAACGGTGAGGATTTGGACACGTGGGAATCAGGGACAGTTCTGTTGTTTAACGGTA
CTTGATGGACATCGCACACCAGTGAGGTCATTGGTGGCGGCGCCGGCAGTGGCGGCTGAA
AGCGGTGGAGCTAATGGTGGTGTTAAGTTGTTTAGTGGAAGCTTTGACGGAGAAATTAAA
GTGTGGCAAATTGTGGTTTCTAGTTCAAGTGGAAGTCCTCTCATATCGTGA