Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043682
CDS Infomation

pacid=37447258 polypeptide=PGSC0003DMP400029636 locus=PGSC0003DMG400016962 ID=PGSC0003DMT400043682.v4.03 annot-version=v4.03
Sequence

ATGAAGATGTTTGAGTTATCTGATTCGGATTCATTGGCTGGTTTTGCATCATCAAGGAAT
GTTTTTCCACCGGGATTTAGGTTTCATCCGACTGACGAGGAACTTGTTCTGTACTATTTG
AAGAAGAAGATCTGCCGGAAGAGGATTCTGCTTGATGCCATTGCTGACACTGATGTTTAC
AAATGGGAACCGGAGGACTTGCCTGATCTATCTAAGTTGAAAACTGGGGACCGGCAGTGG
TTCTTCTTTAGTCCCAGAGATCGAAAGTATCCTAATGGAGCACGGGCAAACAGGGGAACG
AAGCGTGGGCACTGGAAAGTTACCGGAAAGGATCGAACTATTACGTGCAACTCTCGTGCT
GTTGGAGTTAAGAAGACCCTAGTCTTTTATAAAGGCCGAGCACCAGTAGGTGAACGGACA
GACTGGGTGATGCATGAGTATACTATGGATGAAGAAGAGCTGAAAAAATGTCAAAATGCC
CAGGACTACTATGCGCTTTACAAGGTATTTAAGAAGAGTGGCTCCGGGCCTAAGAATGGT
GAGCACTATGGTGCACCTTTTAGAGAAGAGGAGTGGGCTGATGATGAATGTCCAAGTGCC
AAAGGCTTTGTCCATCAGGATGCTCCTCCTGTTGATGGTGGACTCGAGGAGTTGTTGAAC
CCTGTGCTTATGGAGCCACTTTCTGTAGATTATGATTATGCACTGGAGCAGCTTGTACAT
GAGGAGGATACTCGAAGTACCTTGCTAGATCATTCGGCAAAGGAAGTTAATTTTCCCCAC
CACAGTGCGGTGATTGCCCCAGCAAAGGAAAGCTTTGACTTGACACAGTCTGGCACATCA
CAGCTACAGTTACATGAGGTAACAGAAGTCACATCTGCTCCCGTTATTTATGAACAGCAG
CCACATGTGGTGGAAGAGGATTTCCGTGAAGATTTTCTGGAGATGAATGACCTCCTTGGT
CCGGAGCCAAGCACTCAGAACTTTGATAACTTGGAGCTGTATGTTAAAAACTTTGATGAG
GCAGGACCAAGTGGTCAAAACTTTGATATGCCTGCTGGAAACTTTGAAGATTTGCAATTC
GATTTTTTAGATGGGTTGTCAGAGTTTGACCTGTTTCATGATGCACCGTTGCTTGATGAT
ATAAGAACAACTGAAGTTGGGCAAATTACTGAACCATACATGAACAACTTTGTGAATGGT
TCTGAAAACCCTGCTTCTACAACATATATAAGCACTTTTCAGCATGAAATGATGAACAAC
CAGCTAATGTATTTGAATGAGGGAGAACAGACTAGCAATCAACTGTGGACACAAGATCAA
AGGTTCAACATCTTTAACCCCAGCGAGGCAAATCAGTTGGTTGTTCCTCCAGCTACTTCA
GGTACCCAAATGATCTCAAACAGCAATAATGCAACTTTTGCTTGGCCTATGCTGTATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029636
PEP Infomation

pacid=37447258 transcript=PGSC0003DMT400043682 locus=PGSC0003DMG400016962 ID=PGSC0003DMT400043682.v4.03 annot-version=v4.03
Sequence

MKMFELSDSDSLAGFASSRNVFPPGFRFHPTDEELVLYYLKKKICRKRILLDAIADTDVY
KWEPEDLPDLSKLKTGDRQWFFFSPRDRKYPNGARANRGTKRGHWKVTGKDRTITCNSRA
VGVKKTLVFYKGRAPVGERTDWVMHEYTMDEEELKKCQNAQDYYALYKVFKKSGSGPKNG
EHYGAPFREEEWADDECPSAKGFVHQDAPPVDGGLEELLNPVLMEPLSVDYDYALEQLVH
EEDTRSTLLDHSAKEVNFPHHSAVIAPAKESFDLTQSGTSQLQLHEVTEVTSAPVIYEQQ
PHVVEEDFREDFLEMNDLLGPEPSTQNFDNLELYVKNFDEAGPSGQNFDMPAGNFEDLQF
DFLDGLSEFDLFHDAPLLDDIRTTEVGQITEPYMNNFVNGSENPASTTYISTFQHEMMNN
QLMYLNEGEQTSNQLWTQDQRFNIFNPSEANQLVVPPATSGTQMISNSNNATFAWPMLY*

Transcript Sequence

Transcript ID

PGSC0003DMT400043682
Transcript Infomation

pacid=37447258 locus=PGSC0003DMG400016962 ID=PGSC0003DMT400043682.v4.03 annot-version=v4.03
Sequence

ATGAAGATGTTTGAGTTATCTGATTCGGATTCATTGGCTGGTTTTGCATCATCAAGGAAT
GTTTTTCCACCGGGATTTAGGTTTCATCCGACTGACGAGGAACTTGTTCTGTACTATTTG
AAGAAGAAGATCTGCCGGAAGAGGATTCTGCTTGATGCCATTGCTGACACTGATGTTTAC
AAATGGGAACCGGAGGACTTGCCTGATCTATCTAAGTTGAAAACTGGGGACCGGCAGTGG
TTCTTCTTTAGTCCCAGAGATCGAAAGTATCCTAATGGAGCACGGGCAAACAGGGGAACG
AAGCGTGGGCACTGGAAAGTTACCGGAAAGGATCGAACTATTACGTGCAACTCTCGTGCT
GTTGGAGTTAAGAAGACCCTAGTCTTTTATAAAGGCCGAGCACCAGTAGGTGAACGGACA
GACTGGGTGATGCATGAGTATACTATGGATGAAGAAGAGCTGAAAAAATGTCAAAATGCC
CAGGACTACTATGCGCTTTACAAGGTATTTAAGAAGAGTGGCTCCGGGCCTAAGAATGGT
GAGCACTATGGTGCACCTTTTAGAGAAGAGGAGTGGGCTGATGATGAATGTCCAAGTGCC
AAAGGCTTTGTCCATCAGGATGCTCCTCCTGTTGATGGTGGACTCGAGGAGTTGTTGAAC
CCTGTGCTTATGGAGCCACTTTCTGTAGATTATGATTATGCACTGGAGCAGCTTGTACAT
GAGGAGGATACTCGAAGTACCTTGCTAGATCATTCGGCAAAGGAAGTTAATTTTCCCCAC
CACAGTGCGGTGATTGCCCCAGCAAAGGAAAGCTTTGACTTGACACAGTCTGGCACATCA
CAGCTACAGTTACATGAGGTAACAGAAGTCACATCTGCTCCCGTTATTTATGAACAGCAG
CCACATGTGGTGGAAGAGGATTTCCGTGAAGATTTTCTGGAGATGAATGACCTCCTTGGT
CCGGAGCCAAGCACTCAGAACTTTGATAACTTGGAGCTGTATGTTAAAAACTTTGATGAG
GCAGGACCAAGTGGTCAAAACTTTGATATGCCTGCTGGAAACTTTGAAGATTTGCAATTC
GATTTTTTAGATGGGTTGTCAGAGTTTGACCTGTTTCATGATGCACCGTTGCTTGATGAT
ATAAGAACAACTGAAGTTGGGCAAATTACTGAACCATACATGAACAACTTTGTGAATGGT
TCTGAAAACCCTGCTTCTACAACATATATAAGCACTTTTCAGCATGAAATGATGAACAAC
CAGCTAATGTATTTGAATGAGGGAGAACAGACTAGCAATCAACTGTGGACACAAGATCAA
AGGTTCAACATCTTTAACCCCAGCGAGGCAAATCAGTTGGTTGTTCCTCCAGCTACTTCA
GGTACCCAAATGATCTCAAACAGCAATAATGCAACTTTTGCTTGGCCTATGCTGTATTAA