Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043654
CDS Infomation

pacid=37448254 polypeptide=PGSC0003DMP400029621 locus=PGSC0003DMG400016952 ID=PGSC0003DMT400043654.v4.03 annot-version=v4.03
Sequence

ATGAGCAATTTGAGATCTATTTGTAGGCCTCAAGTTGTGTATTTTTCAATTACTTGTTGT
TGCAGAGACTTATTGGGAAAATCAGCAGTTAGGGTTTCAACTTGGAACCTTAATTCAGTT
CCTCGATGGACTAAACCACCGGTGCTGCAATCATGGTATCATACTTCGAGTAGAATTGAA
ACTTGGGATCATCGATTGAATCAGCAGAGGAAAATGGTGACTACTTCTGCTTATAATTGG
AACGATTCAAAGTCTCCCTATGAAACTCTCGAACTAGAAGGGGATGCTGATGAAGAACAA
ATAAAAGTGTCATATAGACGATTGGCGAAGTTTTACCATCCAGATGTTTATAATGGCAGA
GGGACTCTTGAGGAAGGAGAAACTGCTGAAGCTCGATTCATTAAGATTCAAGCTGCTTAC
GAGCTTCTTATAGATGCAGACGAACGGAGAAACTATGATAAAGACAATCGAGTAAACCCC
ATGAAGGCATCCGAAGCGTGGGTGGAGTGGCTAATGAAAAAGCGAAAAGCATTTGACCAA
CGAGGTGATATGGCCATTGCTGCATGGGCTGAACAGCAGCAGCTAGAATTAAATCTGAAG
GCCCGCCGCCTTGCTCGTTCAAAGATGGATCCTGAAGAAGAAAGGCGAATCATTGCTAAA
GAGAGAAAGGCTTCTGTGGAGAATTTTAATAATACGTTAAAGCGGCATACACTTGTCTTA
AGGAAAAGAGATATAATGCGGCGAAAAGCAGAGGAAGAAAAGAAAAGAGTCATTAGCAGG
CTTCTGGCTGCTGAAGGTCTGGAGCTTGCGGAGGAGGACGATAAGAATCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400029621
PEP Infomation

pacid=37448254 transcript=PGSC0003DMT400043654 locus=PGSC0003DMG400016952 ID=PGSC0003DMT400043654.v4.03 annot-version=v4.03
Sequence

MSNLRSICRPQVVYFSITCCCRDLLGKSAVRVSTWNLNSVPRWTKPPVLQSWYHTSSRIE
TWDHRLNQQRKMVTTSAYNWNDSKSPYETLELEGDADEEQIKVSYRRLAKFYHPDVYNGR
GTLEEGETAEARFIKIQAAYELLIDADERRNYDKDNRVNPMKASEAWVEWLMKKRKAFDQ
RGDMAIAAWAEQQQLELNLKARRLARSKMDPEEERRIIAKERKASVENFNNTLKRHTLVL
RKRDIMRRKAEEEKKRVISRLLAAEGLELAEEDDKNL*

Transcript Sequence

Transcript ID

PGSC0003DMT400043654
Transcript Infomation

pacid=37448254 locus=PGSC0003DMG400016952 ID=PGSC0003DMT400043654.v4.03 annot-version=v4.03
Sequence

ATGAGCAATTTGAGATCTATTTGTAGGCCTCAAGTTGTGTATTTTTCAATTACTTGTTGT
TGCAGAGACTTATTGGGAAAATCAGCAGTTAGGGTTTCAACTTGGAACCTTAATTCAGTT
CCTCGATGGACTAAACCACCGGTGCTGCAATCATGGTATCATACTTCGAGTAGAATTGAA
ACTTGGGATCATCGATTGAATCAGCAGAGGAAAATGGTGACTACTTCTGCTTATAATTGG
AACGATTCAAAGTCTCCCTATGAAACTCTCGAACTAGAAGGGGATGCTGATGAAGAACAA
ATAAAAGTGTCATATAGACGATTGGCGAAGTTTTACCATCCAGATGTTTATAATGGCAGA
GGGACTCTTGAGGAAGGAGAAACTGCTGAAGCTCGATTCATTAAGATTCAAGCTGCTTAC
GAGCTTCTTATAGATGCAGACGAACGGAGAAACTATGATAAAGACAATCGAGTAAACCCC
ATGAAGGCATCCGAAGCGTGGGTGGAGTGGCTAATGAAAAAGCGAAAAGCATTTGACCAA
CGAGGTGATATGGCCATTGCTGCATGGGCTGAACAGCAGCAGCTAGAATTAAATCTGAAG
GCCCGCCGCCTTGCTCGTTCAAAGATGGATCCTGAAGAAGAAAGGCGAATCATTGCTAAA
GAGAGAAAGGCTTCTGTGGAGAATTTTAATAATACGTTAAAGCGGCATACACTTGTCTTA
AGGAAAAGAGATATAATGCGGCGAAAAGCAGAGGAAGAAAAGAAAAGAGTCATTAGCAGG
CTTCTGGCTGCTGAAGGTCTGGAGCTTGCGGAGGAGGACGATAAGAATCTATAG