Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043636
CDS Infomation

pacid=37451652 polypeptide=PGSC0003DMP400029610 locus=PGSC0003DMG400016943 ID=PGSC0003DMT400043636.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGTTTCTGACATTAAACAAGTACTTGAATTCTTAAAGAATAATGGCTTCTCA
GAATCTGAATCAGCTCTTATGGAAGATATTATGGAGAAATCTGAATTGGCTTCTTTGGAT
TATGAAACATTCTTATTCCCTGTCATTCCTCCACTTCCTCCTCTTAACCTCATTTCTAAT
AAGAACTCTGCTTCTTCTTCTGACGAAGAATTTGTTAGCTTGCCTTCTTCTGCTACCGAT
TTCTGCTCCTCTGAATTTACAAATCCATATGGAATTCATACTACGGCTGCTCCCACTTCT
CAATCATCATCTGATAGATTATCTCAATTTGGTACTGCAAGAGATTATCATGATTTTGAT
ATGCAAAATGACCTCTTCTGGTATCGGGAGAAAGATGAAGATTTTCCCATGCCACCTTAC
TTTGGGAACTCAGATGGTGTGGGGGATCCTAGTGAGGACAAGTTTGTTATGTCCGAGAGA
CACAGTGCCGCCAATTGGGAGTGTAAATCACCTATAGATGAAGGGTTGAAAGATTATTAT
CATTTGGATAAACAAAAGCATCTTGAAGGGAAAGGTCAATTTAGCTGTTCATCCCCACTT
TGTGCTTGCTGCAAGGGGCCAAAAGGGATTTATGGTGAAGATATCGATATCAACTTAACG
GGGACTAACTATTTTCAGTATGAACCAACTGGAGAGACGAAAACTAACTATTTCATTGAA
ACAAGTTGCAATACTGACTGGGTTGGAGATATCAAAGGTACCCGTGACTTTCAACCTAAG
GCTATTGAGAAAGATTACCACTCATATGTGCATAGAGACTATGAACCAAAAGATGATAGA
CTGGAAGCTTTGGAAGGCAATGAACCCGATGAGGCAGCAGATGATGAGGGAGGTGCTACT
TCAGATGAGCTTTTGATGTTTGAAGGAGAAAATGAGTTTGAAGTATTTAATCTGAGAATT
ATACACAGGAAAAACAGGACTGGGTTTGAGGAGAGCAAGGACCTGCCTATTGTTCTAAAT
AGTATTATCGCTGGTAGATACTATGTAACAGAATACCTTGGTTCAGCTGCATTCAGCAAA
GTCATTCAGGCTCATGATATGCACACTGGAGTAGACGTTTGCTTGAAGATAATAAAGAAT
GACAAGGACTTCTTTGATCAGAGTCTGGATGAGATTAAGCTTCTCAAGTTTGTGAACAAG
AATGATCCTTGTGACGAGCACCATATACTGCGCTTATATGATTACTTCTACCATCAGGAA
CACCTCTTTATCGTTTGTGAACTTCTCCGTGCAAACTTATATGAATTTCAGAAATACAAC
CGAGAATCTGATCTAGAGCATTATTTTACAATGAGCAGGCTGCAGACCATAACTCGACAG
TGCTTGGAGGCACTAGTGTTTTTGCATAATTTGGGGATCATCCACTGTGATCTGAAGCCT
GAAAATATTCTCATCAAAAGTTATCGAAGATGTGAGATAAAAGTTATTGATCTTGGAAGC
AGTTGCTTTCAGTCAGACAGCTTGTCCTTATATGTACAGTCTCGTTCCTATAGAGCTCCT
GAAGTCATCTTAGGCCTCCCTTATGATGCGAAAATTGATCTTTGGTCTCTTGGCTGCATC
TTGGGAGAGCTGTGCTCTGGAGAGGTGCTTTTTCCAAATGAAGCAGTTGTTATGTTGCTT
GCACGTGTGATCGGAATGCTTGGTCCTGTAGACATGGACATGTTAGAAAGGGGACAAGAG
ACACAAAAATATTTCACAAAGGATTTTGACCTTTATCATATAAATGAGGATACTAGTCTA
CTGGAATACATCATCCCCGAGGAAATGTCATTGGAGCATCAGCTGTCAGTTTCTGATCCA
TTGTTCCTTGATTTTGTAAGAAAGTTGCTTGAGATAAATCCTCAAAAACGCCTTACGGCC
AAAGAGGCCCTAAATCATCCTTGGCTTTCCCATTGGTATGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029610
PEP Infomation

pacid=37451652 transcript=PGSC0003DMT400043636 locus=PGSC0003DMG400016943 ID=PGSC0003DMT400043636.v4.03 annot-version=v4.03
Sequence

MASVSDIKQVLEFLKNNGFSESESALMEDIMEKSELASLDYETFLFPVIPPLPPLNLISN
KNSASSSDEEFVSLPSSATDFCSSEFTNPYGIHTTAAPTSQSSSDRLSQFGTARDYHDFD
MQNDLFWYREKDEDFPMPPYFGNSDGVGDPSEDKFVMSERHSAANWECKSPIDEGLKDYY
HLDKQKHLEGKGQFSCSSPLCACCKGPKGIYGEDIDINLTGTNYFQYEPTGETKTNYFIE
TSCNTDWVGDIKGTRDFQPKAIEKDYHSYVHRDYEPKDDRLEALEGNEPDEAADDEGGAT
SDELLMFEGENEFEVFNLRIIHRKNRTGFEESKDLPIVLNSIIAGRYYVTEYLGSAAFSK
VIQAHDMHTGVDVCLKIIKNDKDFFDQSLDEIKLLKFVNKNDPCDEHHILRLYDYFYHQE
HLFIVCELLRANLYEFQKYNRESDLEHYFTMSRLQTITRQCLEALVFLHNLGIIHCDLKP
ENILIKSYRRCEIKVIDLGSSCFQSDSLSLYVQSRSYRAPEVILGLPYDAKIDLWSLGCI
LGELCSGEVLFPNEAVVMLLARVIGMLGPVDMDMLERGQETQKYFTKDFDLYHINEDTSL
LEYIIPEEMSLEHQLSVSDPLFLDFVRKLLEINPQKRLTAKEALNHPWLSHWYE*

Transcript Sequence

Transcript ID

PGSC0003DMT400043636
Transcript Infomation

pacid=37451652 locus=PGSC0003DMG400016943 ID=PGSC0003DMT400043636.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTGTTTCTGACATTAAACAAGTACTTGAATTCTTAAAGAATAATGGCTTCTCA
GAATCTGAATCAGCTCTTATGGAAGATATTATGGAGAAATCTGAATTGGCTTCTTTGGAT
TATGAAACATTCTTATTCCCTGTCATTCCTCCACTTCCTCCTCTTAACCTCATTTCTAAT
AAGAACTCTGCTTCTTCTTCTGACGAAGAATTTGTTAGCTTGCCTTCTTCTGCTACCGAT
TTCTGCTCCTCTGAATTTACAAATCCATATGGAATTCATACTACGGCTGCTCCCACTTCT
CAATCATCATCTGATAGATTATCTCAATTTGGTACTGCAAGAGATTATCATGATTTTGAT
ATGCAAAATGACCTCTTCTGGTATCGGGAGAAAGATGAAGATTTTCCCATGCCACCTTAC
TTTGGGAACTCAGATGGTGTGGGGGATCCTAGTGAGGACAAGTTTGTTATGTCCGAGAGA
CACAGTGCCGCCAATTGGGAGTGTAAATCACCTATAGATGAAGGGTTGAAAGATTATTAT
CATTTGGATAAACAAAAGCATCTTGAAGGGAAAGGTCAATTTAGCTGTTCATCCCCACTT
TGTGCTTGCTGCAAGGGGCCAAAAGGGATTTATGGTGAAGATATCGATATCAACTTAACG
GGGACTAACTATTTTCAGTATGAACCAACTGGAGAGACGAAAACTAACTATTTCATTGAA
ACAAGTTGCAATACTGACTGGGTTGGAGATATCAAAGGTACCCGTGACTTTCAACCTAAG
GCTATTGAGAAAGATTACCACTCATATGTGCATAGAGACTATGAACCAAAAGATGATAGA
CTGGAAGCTTTGGAAGGCAATGAACCCGATGAGGCAGCAGATGATGAGGGAGGTGCTACT
TCAGATGAGCTTTTGATGTTTGAAGGAGAAAATGAGTTTGAAGTATTTAATCTGAGAATT
ATACACAGGAAAAACAGGACTGGGTTTGAGGAGAGCAAGGACCTGCCTATTGTTCTAAAT
AGTATTATCGCTGGTAGATACTATGTAACAGAATACCTTGGTTCAGCTGCATTCAGCAAA
GTCATTCAGGCTCATGATATGCACACTGGAGTAGACGTTTGCTTGAAGATAATAAAGAAT
GACAAGGACTTCTTTGATCAGAGTCTGGATGAGATTAAGCTTCTCAAGTTTGTGAACAAG
AATGATCCTTGTGACGAGCACCATATACTGCGCTTATATGATTACTTCTACCATCAGGAA
CACCTCTTTATCGTTTGTGAACTTCTCCGTGCAAACTTATATGAATTTCAGAAATACAAC
CGAGAATCTGATCTAGAGCATTATTTTACAATGAGCAGGCTGCAGACCATAACTCGACAG
TGCTTGGAGGCACTAGTGTTTTTGCATAATTTGGGGATCATCCACTGTGATCTGAAGCCT
GAAAATATTCTCATCAAAAGTTATCGAAGATGTGAGATAAAAGTTATTGATCTTGGAAGC
AGTTGCTTTCAGTCAGACAGCTTGTCCTTATATGTACAGTCTCGTTCCTATAGAGCTCCT
GAAGTCATCTTAGGCCTCCCTTATGATGCGAAAATTGATCTTTGGTCTCTTGGCTGCATC
TTGGGAGAGCTGTGCTCTGGAGAGGTGCTTTTTCCAAATGAAGCAGTTGTTATGTTGCTT
GCACGTGTGATCGGAATGCTTGGTCCTGTAGACATGGACATGTTAGAAAGGGGACAAGAG
ACACAAAAATATTTCACAAAGGATTTTGACCTTTATCATATAAATGAGGATACTAGTCTA
CTGGAATACATCATCCCCGAGGAAATGTCATTGGAGCATCAGCTGTCAGTTTCTGATCCA
TTGTTCCTTGATTTTGTAAGAAAGTTGCTTGAGATAAATCCTCAAAAACGCCTTACGGCC
AAAGAGGCCCTAAATCATCCTTGGCTTTCCCATTGGTATGAGTAG