Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043632
CDS Infomation

pacid=37451331 polypeptide=PGSC0003DMP400029606 locus=PGSC0003DMG400016941 ID=PGSC0003DMT400043632.v4.03 annot-version=v4.03
Sequence

ATGCCAACGCCAGTTAATACTGCTAGGCAATGCTTGACGCATGAAGCTTCCATCACTCTC
GACGATGCTGTAGCCATGGCAGGTCGTCGTGGCCATGCTCAAACTACATCTCTTCATTAC
ATATCTTCCTTACTCTCTGTTCCTTCTTCATGTTTACGTGAGGCATGTTCTCGTACAAGG
AACAATGCATACTCTGTTCGTGTCCAATTCAAAGCTCTAGACCTCTGTTTAGGGGTTTCG
ATGGATCGGTTGCCTTCGTCGCCCAGCAGCAGCAAGGTAGACTATCCACCTGTTTCGAAT
TCTCTTATGGCAGCCATAAAGAGGTCGCAAGCGAATCAGAGACGACAGCCGGAGAATTTC
AATTTTTATCAACAACAGCTTCAGAATCAGTCAGCTTCTTCTTCTTCTTCTTCTTCAGTT
CCAGTAGTCAAGGTTGAGTTACGGAATCTCATAATATCTGTCCTTGATGACCCTGTTGTA
AGCAGAGTATTTGGGGAAGCTGGTTTCAGGAGTTGTGATATTAAACTTGCAATTCTTAGA
CCTGTTCATCAACTCTTCAGATATTCAAGATTCAAAGGACCACCCTTGTTTTTGTGTAAT
TTAACCAATCAAACCGATCGAAGTTTTAGTTTCCCCTTCTTGGGATTCTCTGGGGGAGAA
GATGATTGCAGAAGAATTGGGGAGGTTTTCGTCAATAACAGAGGAAAAAATCCACTTATT
CTTGGTACTTGTGCACAGGGTGCTATGAACAATTTCCTTGAAATGATACAGAGTAACAGA
GGAGGAGGAGGAGGAATCCTTCCTGTTGAGGTATATGGATTGAGTGTGATTTGTATAGAG
ACAGAGATCATAAGGTTTGTTAGAGGAGAATATGATGAGGAATTAATGAAGTCGAAGTTT
GAGGAGATTGGAAGTATGTTGATGAATAATAGTTTAGGGTCTGGTGTTGTTGTCAATTAC
GGAGATTTAAAACTGTTATCAAGCAATGATGGTTATATTGATTCTTGCAGATATATTGTT
AGCAAATTGACAAGTTTGCTACAGATTAATCATGGAAAACTCTGGTTGATTGGGTGGGTA
GAAAAGTATGAGATATATTTGAAAGTTTTGAATAGATTTCCTTACATAGAAAAAGATTGG
GAGTTGCAGCTTTTGACAATCATTTCTTCTGGAAATCCAAAGGAAGAAACATTTCCTAGA
TCCAGGTTGATGGAATCTTTTGTGCCATTGGGAGGATTCTTTTCTACGGCAACTGGTGAT
ATTAAAAGTCCGTTAAGCAGTTCATACCACACTGCATCCCGGTGTCACTTATGCAATGAG
AAATGCAAACAAGAAGTAAATGCTCTCTCAAAATGTGGATTAATAAGCACTGCTTCAGTT
GCAGATCACTATCAATCAAGTCTGCCTTCTTGGTTGCAAATGACTCAACTCAACACTAAT
GGAGGACTCGACCCTATCAAGGCCAAAGATGATAAAATGGTATTGGGTGCTAAAATTGCT
GGTTTGCAGAGAAAATGGGACAATCTATGCCAGCGTTTACACTACAATCAACCATTACCC
AAGACAAGCAACTTTCACATGACTTCTGAATTCCCATCAGTTGTAGGCTTTCAAGTTGTT
GAAGACCGAAAACAAAGTCTCAATAACGAAAACATTGAAACTAGGAGGAAGAAAATGACT
TGCACAATTTCTTCATCAAATGAAAGCAGCATTTTTCTCTCCAAAACGCGGTCACAAGGT
GATGATGACCATGGCTTCAACTCTTCAACCTCTCTAACTTCAGTCACAACAGATTTAGGT
TTGTGCATGGCCTCTACTTCTCCTAGCAAAGAACAAGAGCACCTCACAAACCACAGTAGC
ATTAATCAACCACATGACATATCATGCAGTGTTGAGGCGCCTCGTTTCATTAACCGCTCT
CCTCTTCAGCAGCAATTGGATCCAAAAGATTTTAAGATGCTATATGCAGCTCTTATAGAA
AAGGTTAATTGGCAAGAGGAGGCTGTAAATGCCATTAGCCAAACAATAGCACGGTGCAGA
TGTAGAAATGAAAGAAACAATTGTCCAAGTCGAGGAGACATCTGGCTCAACTTTCTTGGA
CCTGATAAGCTCGGTAAGAAGAAAATTGCAATTGCATTGGGTGAGATTCTATATGGAAGC
ACAAACAACTTAATCTGTGTAGACCTAAGTCTACAGGATGAAGTCGGGTTGTTTGATCTT
CAAGTATTGAATCAATACGACATGAGATTCAGAGGGAAGCATGTTGTTGACTATGTTGCT
GATAAACTGAGGAACTGCCCTTTATCTGTTGTTTTCCTTGAAAATGTGGATAAAGCTGAT
ATACTGATGCAGAAAAGCTTGTCCCAAGCTGTTAAGACTGGTAGATTTTTGGACTCTCAT
GGTAGAGAAGTTAGCATAGGTAATGCAATCTTTGTGACGACGTCATCAAGATTAGATGAA
GAAAGAACTCTTCCTTCTACCAAAGAAACAGCTAAGTATTCGGAAGAAGATATATTGGCA
GCTAAAGGTAACCAAATCCAGATACTAATTGCATTTGATCTTACAGATGATGTCAAAAGT
CCAGACTCAACTGCATTGATAACAACTAGAAAAAGATCTTCTAGCCAAATCTTTGTGAAT
AATAGAAAGCTTATAACTACTGGTCCAATCGAAAGTGTAGATCAGCAATTTGGAAGCTCG
GAGATGGCCAAACGAGCCCACAAGACATCAAACACATGCTTAGATTTGAATATTCCAGCT
GAAGAGATTGAAAATTATGAGAACTTTACTGGAGATTCTGGCTGTGACTTTTCCAATGAA
AACACCACAGCATGGTTGAAACAATTGTTTACACAATTTGATGAGACCGCGATTTTTAGG
CCATTGGATTTAGACTCTCTTGCTGAGAAGCTATTGAAGGAGATGAGACAATGCTTCCAC
AAAATTGTCGGTCCAGAATGTTTGCTAGAGATTGACTCAAATGTAGTGGAACAAATTCTG
GCAGCAACATGTTTAAGTGACGGCAAGAAAATAGAAGATTGGATTCAACATGTTCTTGGA
AGGGGATTTGTAGAAGCACAAGAAAGATATAGCTTAAGTGCTCGATCTGTCGTGAAACTT
GTGACCTGCGAGAGCTATCTTCAACAAGTTCATATACCAGGAGTTCTCCTTCCTGGCAGA
ATCATCGTGAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029606
PEP Infomation

pacid=37451331 transcript=PGSC0003DMT400043632 locus=PGSC0003DMG400016941 ID=PGSC0003DMT400043632.v4.03 annot-version=v4.03
Sequence

MPTPVNTARQCLTHEASITLDDAVAMAGRRGHAQTTSLHYISSLLSVPSSCLREACSRTR
NNAYSVRVQFKALDLCLGVSMDRLPSSPSSSKVDYPPVSNSLMAAIKRSQANQRRQPENF
NFYQQQLQNQSASSSSSSSVPVVKVELRNLIISVLDDPVVSRVFGEAGFRSCDIKLAILR
PVHQLFRYSRFKGPPLFLCNLTNQTDRSFSFPFLGFSGGEDDCRRIGEVFVNNRGKNPLI
LGTCAQGAMNNFLEMIQSNRGGGGGILPVEVYGLSVICIETEIIRFVRGEYDEELMKSKF
EEIGSMLMNNSLGSGVVVNYGDLKLLSSNDGYIDSCRYIVSKLTSLLQINHGKLWLIGWV
EKYEIYLKVLNRFPYIEKDWELQLLTIISSGNPKEETFPRSRLMESFVPLGGFFSTATGD
IKSPLSSSYHTASRCHLCNEKCKQEVNALSKCGLISTASVADHYQSSLPSWLQMTQLNTN
GGLDPIKAKDDKMVLGAKIAGLQRKWDNLCQRLHYNQPLPKTSNFHMTSEFPSVVGFQVV
EDRKQSLNNENIETRRKKMTCTISSSNESSIFLSKTRSQGDDDHGFNSSTSLTSVTTDLG
LCMASTSPSKEQEHLTNHSSINQPHDISCSVEAPRFINRSPLQQQLDPKDFKMLYAALIE
KVNWQEEAVNAISQTIARCRCRNERNNCPSRGDIWLNFLGPDKLGKKKIAIALGEILYGS
TNNLICVDLSLQDEVGLFDLQVLNQYDMRFRGKHVVDYVADKLRNCPLSVVFLENVDKAD
ILMQKSLSQAVKTGRFLDSHGREVSIGNAIFVTTSSRLDEERTLPSTKETAKYSEEDILA
AKGNQIQILIAFDLTDDVKSPDSTALITTRKRSSSQIFVNNRKLITTGPIESVDQQFGSS
EMAKRAHKTSNTCLDLNIPAEEIENYENFTGDSGCDFSNENTTAWLKQLFTQFDETAIFR
PLDLDSLAEKLLKEMRQCFHKIVGPECLLEIDSNVVEQILAATCLSDGKKIEDWIQHVLG
RGFVEAQERYSLSARSVVKLVTCESYLQQVHIPGVLLPGRIIVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400043632
Transcript Infomation

pacid=37451331 locus=PGSC0003DMG400016941 ID=PGSC0003DMT400043632.v4.03 annot-version=v4.03
Sequence

ATGCCAACGCCAGTTAATACTGCTAGGCAATGCTTGACGCATGAAGCTTCCATCACTCTC
GACGATGCTGTAGCCATGGCAGGTCGTCGTGGCCATGCTCAAACTACATCTCTTCATTAC
ATATCTTCCTTACTCTCTGTTCCTTCTTCATGTTTACGTGAGGCATGTTCTCGTACAAGG
AACAATGCATACTCTGTTCGTGTCCAATTCAAAGCTCTAGACCTCTGTTTAGGGGTTTCG
ATGGATCGGTTGCCTTCGTCGCCCAGCAGCAGCAAGGTAGACTATCCACCTGTTTCGAAT
TCTCTTATGGCAGCCATAAAGAGGTCGCAAGCGAATCAGAGACGACAGCCGGAGAATTTC
AATTTTTATCAACAACAGCTTCAGAATCAGTCAGCTTCTTCTTCTTCTTCTTCTTCAGTT
CCAGTAGTCAAGGTTGAGTTACGGAATCTCATAATATCTGTCCTTGATGACCCTGTTGTA
AGCAGAGTATTTGGGGAAGCTGGTTTCAGGAGTTGTGATATTAAACTTGCAATTCTTAGA
CCTGTTCATCAACTCTTCAGATATTCAAGATTCAAAGGACCACCCTTGTTTTTGTGTAAT
TTAACCAATCAAACCGATCGAAGTTTTAGTTTCCCCTTCTTGGGATTCTCTGGGGGAGAA
GATGATTGCAGAAGAATTGGGGAGGTTTTCGTCAATAACAGAGGAAAAAATCCACTTATT
CTTGGTACTTGTGCACAGGGTGCTATGAACAATTTCCTTGAAATGATACAGAGTAACAGA
GGAGGAGGAGGAGGAATCCTTCCTGTTGAGGTATATGGATTGAGTGTGATTTGTATAGAG
ACAGAGATCATAAGGTTTGTTAGAGGAGAATATGATGAGGAATTAATGAAGTCGAAGTTT
GAGGAGATTGGAAGTATGTTGATGAATAATAGTTTAGGGTCTGGTGTTGTTGTCAATTAC
GGAGATTTAAAACTGTTATCAAGCAATGATGGTTATATTGATTCTTGCAGATATATTGTT
AGCAAATTGACAAGTTTGCTACAGATTAATCATGGAAAACTCTGGTTGATTGGGTGGGTA
GAAAAGTATGAGATATATTTGAAAGTTTTGAATAGATTTCCTTACATAGAAAAAGATTGG
GAGTTGCAGCTTTTGACAATCATTTCTTCTGGAAATCCAAAGGAAGAAACATTTCCTAGA
TCCAGGTTGATGGAATCTTTTGTGCCATTGGGAGGATTCTTTTCTACGGCAACTGGTGAT
ATTAAAAGTCCGTTAAGCAGTTCATACCACACTGCATCCCGGTGTCACTTATGCAATGAG
AAATGCAAACAAGAAGTAAATGCTCTCTCAAAATGTGGATTAATAAGCACTGCTTCAGTT
GCAGATCACTATCAATCAAGTCTGCCTTCTTGGTTGCAAATGACTCAACTCAACACTAAT
GGAGGACTCGACCCTATCAAGGCCAAAGATGATAAAATGGTATTGGGTGCTAAAATTGCT
GGTTTGCAGAGAAAATGGGACAATCTATGCCAGCGTTTACACTACAATCAACCATTACCC
AAGACAAGCAACTTTCACATGACTTCTGAATTCCCATCAGTTGTAGGCTTTCAAGTTGTT
GAAGACCGAAAACAAAGTCTCAATAACGAAAACATTGAAACTAGGAGGAAGAAAATGACT
TGCACAATTTCTTCATCAAATGAAAGCAGCATTTTTCTCTCCAAAACGCGGTCACAAGGT
GATGATGACCATGGCTTCAACTCTTCAACCTCTCTAACTTCAGTCACAACAGATTTAGGT
TTGTGCATGGCCTCTACTTCTCCTAGCAAAGAACAAGAGCACCTCACAAACCACAGTAGC
ATTAATCAACCACATGACATATCATGCAGTGTTGAGGCGCCTCGTTTCATTAACCGCTCT
CCTCTTCAGCAGCAATTGGATCCAAAAGATTTTAAGATGCTATATGCAGCTCTTATAGAA
AAGGTTAATTGGCAAGAGGAGGCTGTAAATGCCATTAGCCAAACAATAGCACGGTGCAGA
TGTAGAAATGAAAGAAACAATTGTCCAAGTCGAGGAGACATCTGGCTCAACTTTCTTGGA
CCTGATAAGCTCGGTAAGAAGAAAATTGCAATTGCATTGGGTGAGATTCTATATGGAAGC
ACAAACAACTTAATCTGTGTAGACCTAAGTCTACAGGATGAAGTCGGGTTGTTTGATCTT
CAAGTATTGAATCAATACGACATGAGATTCAGAGGGAAGCATGTTGTTGACTATGTTGCT
GATAAACTGAGGAACTGCCCTTTATCTGTTGTTTTCCTTGAAAATGTGGATAAAGCTGAT
ATACTGATGCAGAAAAGCTTGTCCCAAGCTGTTAAGACTGGTAGATTTTTGGACTCTCAT
GGTAGAGAAGTTAGCATAGGTAATGCAATCTTTGTGACGACGTCATCAAGATTAGATGAA
GAAAGAACTCTTCCTTCTACCAAAGAAACAGCTAAGTATTCGGAAGAAGATATATTGGCA
GCTAAAGGTAACCAAATCCAGATACTAATTGCATTTGATCTTACAGATGATGTCAAAAGT
CCAGACTCAACTGCATTGATAACAACTAGAAAAAGATCTTCTAGCCAAATCTTTGTGAAT
AATAGAAAGCTTATAACTACTGGTCCAATCGAAAGTGTAGATCAGCAATTTGGAAGCTCG
GAGATGGCCAAACGAGCCCACAAGACATCAAACACATGCTTAGATTTGAATATTCCAGCT
GAAGAGATTGAAAATTATGAGAACTTTACTGGAGATTCTGGCTGTGACTTTTCCAATGAA
AACACCACAGCATGGTTGAAACAATTGTTTACACAATTTGATGAGACCGCGATTTTTAGG
CCATTGGATTTAGACTCTCTTGCTGAGAAGCTATTGAAGGAGATGAGACAATGCTTCCAC
AAAATTGTCGGTCCAGAATGTTTGCTAGAGATTGACTCAAATGTAGTGGAACAAATTCTG
GCAGCAACATGTTTAAGTGACGGCAAGAAAATAGAAGATTGGATTCAACATGTTCTTGGA
AGGGGATTTGTAGAAGCACAAGAAAGATATAGCTTAAGTGCTCGATCTGTCGTGAAACTT
GTGACCTGCGAGAGCTATCTTCAACAAGTTCATATACCAGGAGTTCTCCTTCCTGGCAGA
ATCATCGTGAATTAG