Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043571
CDS Infomation

pacid=37460504 polypeptide=PGSC0003DMP400029564 locus=PGSC0003DMG400016919 ID=PGSC0003DMT400043571.v4.03 annot-version=v4.03
Sequence

ATGACACATGTTTTGCAACAGAAGCCTGATAGCACAGGGGATGATGCCCACTCTGAATTT
GAGAGGGGATGGGAGGAGTTAATGTGCGGGCACTTGGACGAGTGTATGTCATTTGCTTCA
TCTAGTTCAGCACGAAACACTGAAGATGAGGACGATGACAGCGATGGTCTTGTGAGAAGA
AGAAGAAGGAGGACTACTTCCCTAATTGAAGGCGATGATAATCTGGCTGAGTCTTCTGCT
GCTAGGCGGAGGCGTTCACGGATTTTGAGTAGGTGGGCAGCTAGACAGGCAGAACATATG
ATTACTACTATCGAGAGGAGGAATCGTGAGTCCGAGTTGATGGCACTTGCCGGTTTGCAC
ACTGTGTCGACACTTGATTCTTCATTCTTGAGAGAATCACAATCTCCTACTTCAAGGCGT
GATGCCGAGAGGACAAGCAGTAGGTCCTCGACTATCTTGCAAATGTGGAGGGAGTTGGAG
GATGAGCATATATTGAATCATGCCCGAGAGAGGGTAAGGGAAAGACTGACACACCAGAGG
ACTGTGGACTCTAACACCAATATTTCTAGTACTAGTATTTCAGAAAGCCGGGAGACTGAG
AACCATGATACTTTAGTGGATGCTAATGAGAGTGAGAATGAGTATGGTACTTGGTCTCAT
GACGTGATTGGACCACAGATTGAGAACAGCGAGAATGGAAACTTCAGCCGTGAACAGTCT
CCTGATCTAGGGGAAGTTGAGAGGGAGAGGGTGAGACAAATTGTTCGTGGATGGATGGAG
AGTGGGATCAGTGACCATTCACCTAATGTCTCTCAGAGGAATGGTGTCCCAAGAAGTGAA
TGGCTGGGGGAGACAGAGCGTGAAAGGGTGAGAATTGTGAGGGAATGGGTCCAAATGACT
AGTCAACAAAGAGGACCTCGTGGTGGCAGAAGGGAAGAACAGTCCAATGGGCTTAGTGTT
CAAGCTGATCGTGTTCGTGATGAGTCTGTTGTTGAGCATGAGGAAGGCCAGCCAGAGCAT
GTACATAGAGACATGCTGAGGTTGCGTGGGAGGCAGGCTTTACTGGATTTGCTTGTGAGA
AGTGAAGGGGAAAGACAGAGGGAACTTCAACGTCTCTTAGAGCATCGTGCGGTTTCTGAT
TTTGCCCACCGCAGTAGGATTCAGTCACTACTCAGAGGAAGGTTCTTGCGAAATGAAGGG
CCTGCTGAGGAAGAGAGACCACCTTCAATGGCAGCAAGCGAACTAGTTCATCTTAGGCAA
CGCCACACTGTCTCTGGGCTCAGGCAAGGATTTCGCTCCAGATTAGAAAACATTGTACGT
GGTCAAGTGAGCAGCCATTCTGAATCTTCATCTAACAGTGGCAACGGTGGTTTGAGAAGT
AACCAGGCTCATGCAAATCCTTTACAGGAGGTACAAAATGAAAATCTTGAGCAGCTGCAG
TCTAGGGAGCAGGAGCGTATTACTCATCAGTTGCCTGATCACAGAGAGAGTTTTGATTCC
AGTACAACTAGTCAGGCTACAAACTGGCTAGTGTCTCCTAACCAAGGAAGGGGTCAAGTG
GAACCCATTGTTGAAGCTGATGGAGCAAATCAGCGGGATGCAACTTCTAATGAACAGAGT
CATGGAACTATGGAGAATACAAGTGGGAATTGGCCACAAAATCAACCAATTGTTTGGCCC
CCTGACACAACAGGTGACATGAATAGAGATGAACGCCGTTTACCAGAAAATATTGAGGTT
TGGCATGAGGATGGGTCACAAGAAGCTGTGGAGAATCGGTCAGAAGGGCCTTCTGATCCT
CCTAGAATGCGGCGTCCTGTCCCATATAGAAGAATTAGTAGATTCCATCCGCCCGATGAT
GATAATGTGTATAGTATGGAACTCAGGGAGCTTCTTAGCAGGAGGAGTGTTTCCAATCTT
CTTCACAGTGACTTCCGTGAAAGTTTAGATCATTTAATTCAGTCATATGTAGAAAGGCAA
GGCCGTGCTCCAATTGACTGGGATTTGCATAGGAACTTGCCTATTCCAACTTCAACTGAA
AGGGATCCGGACAACCAGAATGTTGCCCAACCGGAAGGAATTAGCAGGCCTTCACATGGG
CAACCATCTCCTCCTGTACCTCCTCCACAACCACTTTGGCATCAGGATTTGCACCAATCC
AGTTGGCCACGTCTCACTGTGCATCGTTCTGAACTTGAGTGGGAGATGATGAATGATCTT
AGAACGGACATGGCAAAACTGCAGCAAGGTGTGAATCATATGCAAAAGATGTTGGAGGCC
TGCATGGATATGCAACTGGAGTTGCAACGTTCAGTCAGACAGGAAGTTTCAGCTGCTTTG
AATAGATCTGCTGATGGACAAGGAGTTGCTGAGACCTCAGCTGATGGATCTAAATGGGGC
CACGTGAAAAAGGGTACTTGCTGTGTTTGTTGTGATATTCACATTGATGCCTTGTTGTAC
AGATGTGGGCACATGTGTACTTGCTACAAATGCGCAAATGAATTGGTTCGAGGTGGAGGG
AAGTGTCCATTGTGCAGGGCACCAATTGTTGAGGTGATCCGAGCTTACTCAATATTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029564
PEP Infomation

pacid=37460504 transcript=PGSC0003DMT400043571 locus=PGSC0003DMG400016919 ID=PGSC0003DMT400043571.v4.03 annot-version=v4.03
Sequence

MTHVLQQKPDSTGDDAHSEFERGWEELMCGHLDECMSFASSSSARNTEDEDDDSDGLVRR
RRRRTTSLIEGDDNLAESSAARRRRSRILSRWAARQAEHMITTIERRNRESELMALAGLH
TVSTLDSSFLRESQSPTSRRDAERTSSRSSTILQMWRELEDEHILNHARERVRERLTHQR
TVDSNTNISSTSISESRETENHDTLVDANESENEYGTWSHDVIGPQIENSENGNFSREQS
PDLGEVERERVRQIVRGWMESGISDHSPNVSQRNGVPRSEWLGETERERVRIVREWVQMT
SQQRGPRGGRREEQSNGLSVQADRVRDESVVEHEEGQPEHVHRDMLRLRGRQALLDLLVR
SEGERQRELQRLLEHRAVSDFAHRSRIQSLLRGRFLRNEGPAEEERPPSMAASELVHLRQ
RHTVSGLRQGFRSRLENIVRGQVSSHSESSSNSGNGGLRSNQAHANPLQEVQNENLEQLQ
SREQERITHQLPDHRESFDSSTTSQATNWLVSPNQGRGQVEPIVEADGANQRDATSNEQS
HGTMENTSGNWPQNQPIVWPPDTTGDMNRDERRLPENIEVWHEDGSQEAVENRSEGPSDP
PRMRRPVPYRRISRFHPPDDDNVYSMELRELLSRRSVSNLLHSDFRESLDHLIQSYVERQ
GRAPIDWDLHRNLPIPTSTERDPDNQNVAQPEGISRPSHGQPSPPVPPPQPLWHQDLHQS
SWPRLTVHRSELEWEMMNDLRTDMAKLQQGVNHMQKMLEACMDMQLELQRSVRQEVSAAL
NRSADGQGVAETSADGSKWGHVKKGTCCVCCDIHIDALLYRCGHMCTCYKCANELVRGGG
KCPLCRAPIVEVIRAYSIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400043571
Transcript Infomation

pacid=37460504 locus=PGSC0003DMG400016919 ID=PGSC0003DMT400043571.v4.03 annot-version=v4.03
Sequence

ATGACACATGTTTTGCAACAGAAGCCTGATAGCACAGGGGATGATGCCCACTCTGAATTT
GAGAGGGGATGGGAGGAGTTAATGTGCGGGCACTTGGACGAGTGTATGTCATTTGCTTCA
TCTAGTTCAGCACGAAACACTGAAGATGAGGACGATGACAGCGATGGTCTTGTGAGAAGA
AGAAGAAGGAGGACTACTTCCCTAATTGAAGGCGATGATAATCTGGCTGAGTCTTCTGCT
GCTAGGCGGAGGCGTTCACGGATTTTGAGTAGGTGGGCAGCTAGACAGGCAGAACATATG
ATTACTACTATCGAGAGGAGGAATCGTGAGTCCGAGTTGATGGCACTTGCCGGTTTGCAC
ACTGTGTCGACACTTGATTCTTCATTCTTGAGAGAATCACAATCTCCTACTTCAAGGCGT
GATGCCGAGAGGACAAGCAGTAGGTCCTCGACTATCTTGCAAATGTGGAGGGAGTTGGAG
GATGAGCATATATTGAATCATGCCCGAGAGAGGGTAAGGGAAAGACTGACACACCAGAGG
ACTGTGGACTCTAACACCAATATTTCTAGTACTAGTATTTCAGAAAGCCGGGAGACTGAG
AACCATGATACTTTAGTGGATGCTAATGAGAGTGAGAATGAGTATGGTACTTGGTCTCAT
GACGTGATTGGACCACAGATTGAGAACAGCGAGAATGGAAACTTCAGCCGTGAACAGTCT
CCTGATCTAGGGGAAGTTGAGAGGGAGAGGGTGAGACAAATTGTTCGTGGATGGATGGAG
AGTGGGATCAGTGACCATTCACCTAATGTCTCTCAGAGGAATGGTGTCCCAAGAAGTGAA
TGGCTGGGGGAGACAGAGCGTGAAAGGGTGAGAATTGTGAGGGAATGGGTCCAAATGACT
AGTCAACAAAGAGGACCTCGTGGTGGCAGAAGGGAAGAACAGTCCAATGGGCTTAGTGTT
CAAGCTGATCGTGTTCGTGATGAGTCTGTTGTTGAGCATGAGGAAGGCCAGCCAGAGCAT
GTACATAGAGACATGCTGAGGTTGCGTGGGAGGCAGGCTTTACTGGATTTGCTTGTGAGA
AGTGAAGGGGAAAGACAGAGGGAACTTCAACGTCTCTTAGAGCATCGTGCGGTTTCTGAT
TTTGCCCACCGCAGTAGGATTCAGTCACTACTCAGAGGAAGGTTCTTGCGAAATGAAGGG
CCTGCTGAGGAAGAGAGACCACCTTCAATGGCAGCAAGCGAACTAGTTCATCTTAGGCAA
CGCCACACTGTCTCTGGGCTCAGGCAAGGATTTCGCTCCAGATTAGAAAACATTGTACGT
GGTCAAGTGAGCAGCCATTCTGAATCTTCATCTAACAGTGGCAACGGTGGTTTGAGAAGT
AACCAGGCTCATGCAAATCCTTTACAGGAGGTACAAAATGAAAATCTTGAGCAGCTGCAG
TCTAGGGAGCAGGAGCGTATTACTCATCAGTTGCCTGATCACAGAGAGAGTTTTGATTCC
AGTACAACTAGTCAGGCTACAAACTGGCTAGTGTCTCCTAACCAAGGAAGGGGTCAAGTG
GAACCCATTGTTGAAGCTGATGGAGCAAATCAGCGGGATGCAACTTCTAATGAACAGAGT
CATGGAACTATGGAGAATACAAGTGGGAATTGGCCACAAAATCAACCAATTGTTTGGCCC
CCTGACACAACAGGTGACATGAATAGAGATGAACGCCGTTTACCAGAAAATATTGAGGTT
TGGCATGAGGATGGGTCACAAGAAGCTGTGGAGAATCGGTCAGAAGGGCCTTCTGATCCT
CCTAGAATGCGGCGTCCTGTCCCATATAGAAGAATTAGTAGATTCCATCCGCCCGATGAT
GATAATGTGTATAGTATGGAACTCAGGGAGCTTCTTAGCAGGAGGAGTGTTTCCAATCTT
CTTCACAGTGACTTCCGTGAAAGTTTAGATCATTTAATTCAGTCATATGTAGAAAGGCAA
GGCCGTGCTCCAATTGACTGGGATTTGCATAGGAACTTGCCTATTCCAACTTCAACTGAA
AGGGATCCGGACAACCAGAATGTTGCCCAACCGGAAGGAATTAGCAGGCCTTCACATGGG
CAACCATCTCCTCCTGTACCTCCTCCACAACCACTTTGGCATCAGGATTTGCACCAATCC
AGTTGGCCACGTCTCACTGTGCATCGTTCTGAACTTGAGTGGGAGATGATGAATGATCTT
AGAACGGACATGGCAAAACTGCAGCAAGGTGTGAATCATATGCAAAAGATGTTGGAGGCC
TGCATGGATATGCAACTGGAGTTGCAACGTTCAGTCAGACAGGAAGTTTCAGCTGCTTTG
AATAGATCTGCTGATGGACAAGGAGTTGCTGAGACCTCAGCTGATGGATCTAAATGGGGC
CACGTGAAAAAGGGTACTTGCTGTGTTTGTTGTGATATTCACATTGATGCCTTGTTGTAC
AGATGTGGGCACATGTGTACTTGCTACAAATGCGCAAATGAATTGGTTCGAGGTGGAGGG
AAGTGTCCATTGTGCAGGGCACCAATTGTTGAGGTGATCCGAGCTTACTCAATATTGTAA