Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043547
CDS Infomation

pacid=37480108 polypeptide=PGSC0003DMP400029547 locus=PGSC0003DMG400016909 ID=PGSC0003DMT400043547.v4.03 annot-version=v4.03
Sequence

ATGTCAGGTCCATTAGATCGATTTGCGATGCCCTGCTTTGAGGGGTCGTCCACACACGAT
GAGAGAAGAGAAAGAAAATCTGATTTCGAGAACTCAGAGGATGAGAGGAGGACAAGAATT
GGCACGCTGAAAAAGAAAGCATTAAATGCATCAACAAAATTTAAACATTCTCTTAAGAAG
AAAGGCAGAAGAAAAAGTGATGGACGAGTGAGTTCAGTTTCAATTGAGGATATTCGTGAT
GCTGAGGAGCTGCAAGCTGTTGACCAATTTAGGCAAGCACTGATTTTGGATGATTTGTTA
CCTGGGAGACATGATGACTACTATATGATGCTAAGATTTCTGAAGGCAAGGAAGTTTGAT
ATTGATAAAGCAAAGCATATGTGGGCTGATATGCTTCAGTGGAGGAAGGAATTTGGTGCT
GACACCATTATCCATGATTTTCAATTCCAAGAGCAGGATGAAGTTTCAAAATACTACCCC
CAAGGTTATCATGGGATCGATAGGGAAGGAAGACCAGTATACATTGAAAGGTTAGGGAAA
GTTGATCCCACCAAACTTATGCAAGTTACAACAATGGACCGTTACATCAGAAACCATGTA
CGAGAGTTTGAGAAAACTTTTGCAATCAAGTTTCCAGCATGTACAGTTGCTGCAAAAAGG
CAGATTGATTCAAGCACTACTATTTTGGATGTCCAGGGAGTGGGTTTGAAAAACTTTACC
AAGAGTGCTAGGGAACTCATCATGCGACTTCAGAAGATTGATGGTGATAATTATCCGGAG
ACACTTCATCAAATGCTTATCATCAATGCTGGACCTGGCTTTAGGCTGCTGTGGAGTACT
GTTAAGAGTTTTTTGGATCCCAAGACCACCTCAAAGATACATGTTCTTGGGAACAAGTAC
CAAAACAAATTGCTTGAACTAGTTGATGTTAGTGAGTTGCCAGATTTTTTGGGTGGAACC
TGTACATGTGCAAATCAAGGAGGTTGCCTTCGCTCAGATAAAGGACCATGGCAAAATCCA
GAGATATTAAAGATGATTGGTGAAGCACGGCGTGCCAGGCAGGTTGTTAAAGTTGTAAAC
AGCGAAGGAAAGGTAGTTTATGCTAAGCCTCGCTTCCCCATGCAGTCAAAAGGTAGTGAT
ACCTCCACCGCAGAATCGGGATCTGAAGCAGAAGATATTGCTTCCCCTAAAGCTGTAAGG
AATTATTCGCATCTTCGGCTTACTCCTGTCCGTGAAGAGGCTAAGGGTATTGGAATGTCT
GGCTACACTACAAACTTATCAGGATATGATGAATATGTTCCCATGGTTGACAAGGCAGTT
GATTCTGTGTTGAAGAAGCAAACATCCTTTCATAAAGCCTCCATTGCCAAAGGGATACTT
CCACCAGCAGATTCTCAAAAGCCTGCAGGTGGTCTTAGTGCTCAGCTATTCGGACTGCTT
ATGGCCTTCTTCATGACTGTGGTGATGCTTTTCCGTTCAGTGCTATGCTACATGACTAAG
AAACTTCCAGATCCATCAATTGGTCAAGACCAAGCTGTTCAAGAATTCACCTTTGATGCC
AACAATAATGAGGAGTTTCGGCCACCTTCACCAACTCCAGCCTTTACTGAAGCTCAACTG
CTTTCTGTTGTTCTGAAGAAGTTGGGTGAACTTGAGGACAAAGTAAGTACACTTCAAGAA
AAGCCATCTGAGATGCCTTATGAGAAAGAGGAACTGCTAAATGCTGCTGTTTGCCGTGTG
GATGCCCTGGAAGCTGAGTTAATTGCAACCAAGAAGGCTTTGCATGAGGCTTTGATGAGA
CAAGAGGAACTTCTTGCATACATTGATGGTCAAGAAGCTGCAAAATTTCAGAAAAAGAAG
TTTTGCTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029547
PEP Infomation

pacid=37480108 transcript=PGSC0003DMT400043547 locus=PGSC0003DMG400016909 ID=PGSC0003DMT400043547.v4.03 annot-version=v4.03
Sequence

MSGPLDRFAMPCFEGSSTHDERRERKSDFENSEDERRTRIGTLKKKALNASTKFKHSLKK
KGRRKSDGRVSSVSIEDIRDAEELQAVDQFRQALILDDLLPGRHDDYYMMLRFLKARKFD
IDKAKHMWADMLQWRKEFGADTIIHDFQFQEQDEVSKYYPQGYHGIDREGRPVYIERLGK
VDPTKLMQVTTMDRYIRNHVREFEKTFAIKFPACTVAAKRQIDSSTTILDVQGVGLKNFT
KSARELIMRLQKIDGDNYPETLHQMLIINAGPGFRLLWSTVKSFLDPKTTSKIHVLGNKY
QNKLLELVDVSELPDFLGGTCTCANQGGCLRSDKGPWQNPEILKMIGEARRARQVVKVVN
SEGKVVYAKPRFPMQSKGSDTSTAESGSEAEDIASPKAVRNYSHLRLTPVREEAKGIGMS
GYTTNLSGYDEYVPMVDKAVDSVLKKQTSFHKASIAKGILPPADSQKPAGGLSAQLFGLL
MAFFMTVVMLFRSVLCYMTKKLPDPSIGQDQAVQEFTFDANNNEEFRPPSPTPAFTEAQL
LSVVLKKLGELEDKVSTLQEKPSEMPYEKEELLNAAVCRVDALEAELIATKKALHEALMR
QEELLAYIDGQEAAKFQKKKFCF*

Transcript Sequence

Transcript ID

PGSC0003DMT400043547
Transcript Infomation

pacid=37480108 locus=PGSC0003DMG400016909 ID=PGSC0003DMT400043547.v4.03 annot-version=v4.03
Sequence

ATGTCAGGTCCATTAGATCGATTTGCGATGCCCTGCTTTGAGGGGTCGTCCACACACGAT
GAGAGAAGAGAAAGAAAATCTGATTTCGAGAACTCAGAGGATGAGAGGAGGACAAGAATT
GGCACGCTGAAAAAGAAAGCATTAAATGCATCAACAAAATTTAAACATTCTCTTAAGAAG
AAAGGCAGAAGAAAAAGTGATGGACGAGTGAGTTCAGTTTCAATTGAGGATATTCGTGAT
GCTGAGGAGCTGCAAGCTGTTGACCAATTTAGGCAAGCACTGATTTTGGATGATTTGTTA
CCTGGGAGACATGATGACTACTATATGATGCTAAGATTTCTGAAGGCAAGGAAGTTTGAT
ATTGATAAAGCAAAGCATATGTGGGCTGATATGCTTCAGTGGAGGAAGGAATTTGGTGCT
GACACCATTATCCATGATTTTCAATTCCAAGAGCAGGATGAAGTTTCAAAATACTACCCC
CAAGGTTATCATGGGATCGATAGGGAAGGAAGACCAGTATACATTGAAAGGTTAGGGAAA
GTTGATCCCACCAAACTTATGCAAGTTACAACAATGGACCGTTACATCAGAAACCATGTA
CGAGAGTTTGAGAAAACTTTTGCAATCAAGTTTCCAGCATGTACAGTTGCTGCAAAAAGG
CAGATTGATTCAAGCACTACTATTTTGGATGTCCAGGGAGTGGGTTTGAAAAACTTTACC
AAGAGTGCTAGGGAACTCATCATGCGACTTCAGAAGATTGATGGTGATAATTATCCGGAG
ACACTTCATCAAATGCTTATCATCAATGCTGGACCTGGCTTTAGGCTGCTGTGGAGTACT
GTTAAGAGTTTTTTGGATCCCAAGACCACCTCAAAGATACATGTTCTTGGGAACAAGTAC
CAAAACAAATTGCTTGAACTAGTTGATGTTAGTGAGTTGCCAGATTTTTTGGGTGGAACC
TGTACATGTGCAAATCAAGGAGGTTGCCTTCGCTCAGATAAAGGACCATGGCAAAATCCA
GAGATATTAAAGATGATTGGTGAAGCACGGCGTGCCAGGCAGGTTGTTAAAGTTGTAAAC
AGCGAAGGAAAGGTAGTTTATGCTAAGCCTCGCTTCCCCATGCAGTCAAAAGGTAGTGAT
ACCTCCACCGCAGAATCGGGATCTGAAGCAGAAGATATTGCTTCCCCTAAAGCTGTAAGG
AATTATTCGCATCTTCGGCTTACTCCTGTCCGTGAAGAGGCTAAGGGTATTGGAATGTCT
GGCTACACTACAAACTTATCAGGATATGATGAATATGTTCCCATGGTTGACAAGGCAGTT
GATTCTGTGTTGAAGAAGCAAACATCCTTTCATAAAGCCTCCATTGCCAAAGGGATACTT
CCACCAGCAGATTCTCAAAAGCCTGCAGGTGGTCTTAGTGCTCAGCTATTCGGACTGCTT
ATGGCCTTCTTCATGACTGTGGTGATGCTTTTCCGTTCAGTGCTATGCTACATGACTAAG
AAACTTCCAGATCCATCAATTGGTCAAGACCAAGCTGTTCAAGAATTCACCTTTGATGCC
AACAATAATGAGGAGTTTCGGCCACCTTCACCAACTCCAGCCTTTACTGAAGCTCAACTG
CTTTCTGTTGTTCTGAAGAAGTTGGGTGAACTTGAGGACAAAGTAAGTACACTTCAAGAA
AAGCCATCTGAGATGCCTTATGAGAAAGAGGAACTGCTAAATGCTGCTGTTTGCCGTGTG
GATGCCCTGGAAGCTGAGTTAATTGCAACCAAGAAGGCTTTGCATGAGGCTTTGATGAGA
CAAGAGGAACTTCTTGCATACATTGATGGTCAAGAAGCTGCAAAATTTCAGAAAAAGAAG
TTTTGCTTTTAA