Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043532
CDS Infomation

pacid=37480100 polypeptide=PGSC0003DMP400029536 locus=PGSC0003DMG400016902 ID=PGSC0003DMT400043532.v4.03 annot-version=v4.03
Sequence

ATGAGTGGCAATATGTCAGGACCTCTTGACCAACCATTCAGACCAAGTCTAGAAAAGATT
GACATGGAAAACCATGAGCATGAGAGGAAAACAAGGCTTGGGTCTCTCAAGAAGAAGGCA
GTTAATGCCTCTACCAAATTTAGACATTCTTTTACAAAAAAGGGCAGACGGAACAGCAGA
GTTATGTCTGTTATTGTTGAGGATGAGCATGATGCAGAGGAAATAAAGGCAGTTGATGCA
TTCCGACAAGCGCTTATCTTAGACGAATTACTTCCCGGAAAACATGATGATTATCATAAA
TTGTTAAGATTCTTGAAGGCTAGAAAATTCGATATTGATAAATCCAAGCAGATGTGGGCT
GATATGATCAAGTGGAGGAGCGAATTTGGTGCAGACACTATCGTGGAGGACTTCGAGTTT
AAGGAAAAGGAAGAAGTCCTTAAGTATTATCCACAAGGACATCACGGAGTTGACAAGGAG
GGAAGACCGGTTTATATTGAAAGAATTGGTCAAGTAGATTCTGTCAAGCTTTTACAAGTT
ACAACAATGGATCGCTATCTCAAGTACCACGTGCAGGAGTTCGAGAGGACCCTCAATGAC
AAGATGCCTGCCTGCTCCATTGCATCAAAAAGGCACATTGATACAAGCACAACTATTCTA
GATGTCCAAGGAGTGGGACTGAAGAACTTCAACAAATCAGCAAGGGAGCTCATTCAATGC
CTCCAATCTATTGATGGTAACAATTATCCCGAGAGCTTGTGCCGCATGTATATCATCAAT
GCTGGTTCTGGATTCAGGCTCTTATGGAACTCTGTCAAGTCATTCCTAGACCCCAAGACT
ACGGCAAAGATTCATGTTCTTGGTAACAAATACCAGAGCAAGTTGCTTGAAGTAATCGAT
GCCAGCGAGCTACCAGAATTCTTAGGTGGTACATGCACTTGCGCAGACAAGGGAGGATGC
ATGCTATCTGACAAAGGCCCGTGGAATGATCCTGAAATAATGAAGATGGTTCATAACGGT
GAACATAAATGTTCAAATAGAAATTTCATCTCAACAATTGATGAGAAAACAATCTCAGAG
GATGCAAATGTTTATGTGGCTCATACTCAACTCTCCCCTCTCCACGAGGAAGTTGACATG
AACAAAAACTACCATAGAGCATATGATCCTGAAGACTATATGCCTATAGTGGACAAGGCA
GTTGATGTAACTTGGAGTAAAGCTAACGGTAGAGATTTCTTCCCAATTCACGATGCTTCT
AAGTCACCCGAAGGATTTAGCAACCATCTATTTACCGGAGTTATGACCCTTGTTATGGGT
ATTGTGACATTAGTCAAGATGACTCGAAACATGCCAAGGAAGCTAGCTGATGCCACCCTG
CAGGCTCATGGCTATCAATTAAGTGAACTTACCATATCTTCAAGTGAATACTTCAGCATG
ATTAAACGCATGGAAGAACTCGAGGAGAAAGTCATTACTCTTACCAACAAACCTGCTTCC
TTACCTCCTGAGAAAGAGGAATTACTTAACAACGCCATGAAACGCATCGATACTTTGGAG
CAAGATCTTTCAGCTACACATAAGTCTCTTGAGTTAGCTCTGGCACATCAAGCGGAACTT
CTAGCATACATCGAGAAGAAGAGGAGGAAGAAGAAGTTCTTAGGGATATTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029536
PEP Infomation

pacid=37480100 transcript=PGSC0003DMT400043532 locus=PGSC0003DMG400016902 ID=PGSC0003DMT400043532.v4.03 annot-version=v4.03
Sequence

MSGNMSGPLDQPFRPSLEKIDMENHEHERKTRLGSLKKKAVNASTKFRHSFTKKGRRNSR
VMSVIVEDEHDAEEIKAVDAFRQALILDELLPGKHDDYHKLLRFLKARKFDIDKSKQMWA
DMIKWRSEFGADTIVEDFEFKEKEEVLKYYPQGHHGVDKEGRPVYIERIGQVDSVKLLQV
TTMDRYLKYHVQEFERTLNDKMPACSIASKRHIDTSTTILDVQGVGLKNFNKSARELIQC
LQSIDGNNYPESLCRMYIINAGSGFRLLWNSVKSFLDPKTTAKIHVLGNKYQSKLLEVID
ASELPEFLGGTCTCADKGGCMLSDKGPWNDPEIMKMVHNGEHKCSNRNFISTIDEKTISE
DANVYVAHTQLSPLHEEVDMNKNYHRAYDPEDYMPIVDKAVDVTWSKANGRDFFPIHDAS
KSPEGFSNHLFTGVMTLVMGIVTLVKMTRNMPRKLADATLQAHGYQLSELTISSSEYFSM
IKRMEELEEKVITLTNKPASLPPEKEELLNNAMKRIDTLEQDLSATHKSLELALAHQAEL
LAYIEKKRRKKKFLGIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400043532
Transcript Infomation

pacid=37480100 locus=PGSC0003DMG400016902 ID=PGSC0003DMT400043532.v4.03 annot-version=v4.03
Sequence

ATGAGTGGCAATATGTCAGGACCTCTTGACCAACCATTCAGACCAAGTCTAGAAAAGATT
GACATGGAAAACCATGAGCATGAGAGGAAAACAAGGCTTGGGTCTCTCAAGAAGAAGGCA
GTTAATGCCTCTACCAAATTTAGACATTCTTTTACAAAAAAGGGCAGACGGAACAGCAGA
GTTATGTCTGTTATTGTTGAGGATGAGCATGATGCAGAGGAAATAAAGGCAGTTGATGCA
TTCCGACAAGCGCTTATCTTAGACGAATTACTTCCCGGAAAACATGATGATTATCATAAA
TTGTTAAGATTCTTGAAGGCTAGAAAATTCGATATTGATAAATCCAAGCAGATGTGGGCT
GATATGATCAAGTGGAGGAGCGAATTTGGTGCAGACACTATCGTGGAGGACTTCGAGTTT
AAGGAAAAGGAAGAAGTCCTTAAGTATTATCCACAAGGACATCACGGAGTTGACAAGGAG
GGAAGACCGGTTTATATTGAAAGAATTGGTCAAGTAGATTCTGTCAAGCTTTTACAAGTT
ACAACAATGGATCGCTATCTCAAGTACCACGTGCAGGAGTTCGAGAGGACCCTCAATGAC
AAGATGCCTGCCTGCTCCATTGCATCAAAAAGGCACATTGATACAAGCACAACTATTCTA
GATGTCCAAGGAGTGGGACTGAAGAACTTCAACAAATCAGCAAGGGAGCTCATTCAATGC
CTCCAATCTATTGATGGTAACAATTATCCCGAGAGCTTGTGCCGCATGTATATCATCAAT
GCTGGTTCTGGATTCAGGCTCTTATGGAACTCTGTCAAGTCATTCCTAGACCCCAAGACT
ACGGCAAAGATTCATGTTCTTGGTAACAAATACCAGAGCAAGTTGCTTGAAGTAATCGAT
GCCAGCGAGCTACCAGAATTCTTAGGTGGTACATGCACTTGCGCAGACAAGGGAGGATGC
ATGCTATCTGACAAAGGCCCGTGGAATGATCCTGAAATAATGAAGATGGTTCATAACGGT
GAACATAAATGTTCAAATAGAAATTTCATCTCAACAATTGATGAGAAAACAATCTCAGAG
GATGCAAATGTTTATGTGGCTCATACTCAACTCTCCCCTCTCCACGAGGAAGTTGACATG
AACAAAAACTACCATAGAGCATATGATCCTGAAGACTATATGCCTATAGTGGACAAGGCA
GTTGATGTAACTTGGAGTAAAGCTAACGGTAGAGATTTCTTCCCAATTCACGATGCTTCT
AAGTCACCCGAAGGATTTAGCAACCATCTATTTACCGGAGTTATGACCCTTGTTATGGGT
ATTGTGACATTAGTCAAGATGACTCGAAACATGCCAAGGAAGCTAGCTGATGCCACCCTG
CAGGCTCATGGCTATCAATTAAGTGAACTTACCATATCTTCAAGTGAATACTTCAGCATG
ATTAAACGCATGGAAGAACTCGAGGAGAAAGTCATTACTCTTACCAACAAACCTGCTTCC
TTACCTCCTGAGAAAGAGGAATTACTTAACAACGCCATGAAACGCATCGATACTTTGGAG
CAAGATCTTTCAGCTACACATAAGTCTCTTGAGTTAGCTCTGGCACATCAAGCGGAACTT
CTAGCATACATCGAGAAGAAGAGGAGGAAGAAGAAGTTCTTAGGGATATTTTGA