Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043515
CDS Infomation

pacid=37473461 polypeptide=PGSC0003DMP400029525 locus=PGSC0003DMG400016893 ID=PGSC0003DMT400043515.v4.03 annot-version=v4.03
Sequence

ATGAATCTTCAATCTGCTTGTTCATTGCTTCAGCATGAATCTTCAATCCCCAATTTTTCT
CAATTCCAGTTTCGCAATATTTCTGTGGTGCGGAAGAATCATGGTAGAAGAAGCTATGTT
CGATTGGATAAAAGAACCCATTTGGTTCAGAATGATGTAAAATTTATTCCGTCACTGAAG
AGGGAATTGATAGTGTGTGCCTCTAATTCCAGTCCTCCGGGGAAGTTGAATTATGATGGT
GGGGAAAGTAGGGATGTGAGCAGAATCACCAGTAACGGGTCTGAACCATTTCGGGGTAAA
TCAGGTTCTGTTTCATTCCAAGGGATTACACACCAAATGGTTGAAGAAAGTAAGTTGGTG
TCATCCCCTTTTGAGGAAAAAAGAGGCTCCTTTCTATGGGTTCTTGCTCCTATTGCATTG
ATCTCTTCTTTGGTGCTTCCTCGATTCTTCATTGTGGTTGCCGTTGATGACTTGATTAAG
AATGCAACTCTTGCAGAAATTGTTTCTTCACTTTTCTCTGAGGTCATGTTTTACATTGGC
CTTGCGACATATCTTCGGGTCACTGACAGCGTTCAGAAGCCATATCTACAATTCAGTGCA
AAGAGATGGAGCCTCATAACTGGGCTTAAGGGATATATAACATCTGCTTTCTTTGTAATG
GGGTTTAAGATTTTTGCCCCACTCTTCGCTCTTTATGTTACCTGGCCTTCACTTGGCTTG
CCAGGCTTGGTTGCAGTGGCTCCTCTTTTGGTTGGCTGTTTGGTGCAGTATTTATTCGAG
AGATTGCTTGACAGACACGGATCATCTTCTTGGCCCTTGGTGCCAATTATTTTTGAGATT
TATAGGATATATCAGTTGACGAGATCCGTCCATTTTGTGGAGAAGTTGATGTTTTCTATG
AGCGGAGCTCCTGTCACGCCCGAGTTGTTTGACAGAAGTGGTGCATTGGTTGCTATGATA
GTGACTTTCCAAGTTTTAGGAGTGATTTGCTTATGGTCCTTGCTTACATTTCTTCAAAGG
CTCTTTCCTTCCAGACCTGTTTCTGAAAACTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400029525
PEP Infomation

pacid=37473461 transcript=PGSC0003DMT400043515 locus=PGSC0003DMG400016893 ID=PGSC0003DMT400043515.v4.03 annot-version=v4.03
Sequence

MNLQSACSLLQHESSIPNFSQFQFRNISVVRKNHGRRSYVRLDKRTHLVQNDVKFIPSLK
RELIVCASNSSPPGKLNYDGGESRDVSRITSNGSEPFRGKSGSVSFQGITHQMVEESKLV
SSPFEEKRGSFLWVLAPIALISSLVLPRFFIVVAVDDLIKNATLAEIVSSLFSEVMFYIG
LATYLRVTDSVQKPYLQFSAKRWSLITGLKGYITSAFFVMGFKIFAPLFALYVTWPSLGL
PGLVAVAPLLVGCLVQYLFERLLDRHGSSSWPLVPIIFEIYRIYQLTRSVHFVEKLMFSM
SGAPVTPELFDRSGALVAMIVTFQVLGVICLWSLLTFLQRLFPSRPVSENY*

Transcript Sequence

Transcript ID

PGSC0003DMT400043515
Transcript Infomation

pacid=37473461 locus=PGSC0003DMG400016893 ID=PGSC0003DMT400043515.v4.03 annot-version=v4.03
Sequence

ATGAATCTTCAATCTGCTTGTTCATTGCTTCAGCATGAATCTTCAATCCCCAATTTTTCT
CAATTCCAGTTTCGCAATATTTCTGTGGTGCGGAAGAATCATGGTAGAAGAAGCTATGTT
CGATTGGATAAAAGAACCCATTTGGTTCAGAATGATGTAAAATTTATTCCGTCACTGAAG
AGGGAATTGATAGTGTGTGCCTCTAATTCCAGTCCTCCGGGGAAGTTGAATTATGATGGT
GGGGAAAGTAGGGATGTGAGCAGAATCACCAGTAACGGGTCTGAACCATTTCGGGGTAAA
TCAGGTTCTGTTTCATTCCAAGGGATTACACACCAAATGGTTGAAGAAAGTAAGTTGGTG
TCATCCCCTTTTGAGGAAAAAAGAGGCTCCTTTCTATGGGTTCTTGCTCCTATTGCATTG
ATCTCTTCTTTGGTGCTTCCTCGATTCTTCATTGTGGTTGCCGTTGATGACTTGATTAAG
AATGCAACTCTTGCAGAAATTGTTTCTTCACTTTTCTCTGAGGTCATGTTTTACATTGGC
CTTGCGACATATCTTCGGGTCACTGACAGCGTTCAGAAGCCATATCTACAATTCAGTGCA
AAGAGATGGAGCCTCATAACTGGGCTTAAGGGATATATAACATCTGCTTTCTTTGTAATG
GGGTTTAAGATTTTTGCCCCACTCTTCGCTCTTTATGTTACCTGGCCTTCACTTGGCTTG
CCAGGCTTGGTTGCAGTGGCTCCTCTTTTGGTTGGCTGTTTGGTGCAGTATTTATTCGAG
AGATTGCTTGACAGACACGGATCATCTTCTTGGCCCTTGGTGCCAATTATTTTTGAGATT
TATAGGATATATCAGTTGACGAGATCCGTCCATTTTGTGGAGAAGTTGATGTTTTCTATG
AGCGGAGCTCCTGTCACGCCCGAGTTGTTTGACAGAAGTGGTGCATTGGTTGCTATGATA
GTGACTTTCCAAGTTTTAGGAGTGATTTGCTTATGGTCCTTGCTTACATTTCTTCAAAGG
CTCTTTCCTTCCAGACCTGTTTCTGAAAACTACTAA