Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043495
CDS Infomation

pacid=37472915 polypeptide=PGSC0003DMP400029511 locus=PGSC0003DMG400016887 ID=PGSC0003DMT400043495.v4.03 annot-version=v4.03
Sequence

ATGGCATCAACTTCTCTTGCTCTTCCTTCTCTTAAGCTACAATTCCCCTCACATAAATCA
TCATCTTCTCGTAAAAATTCATCGTCTCATCGTGTTAGTATTCGTCCCATTCAGGCTTCA
GTGTCTGAGAGACCGCCATACATTTCATCACCATCACCATCACCATCGCCACCTGTTAAA
CAAGCAAAACTCCCAACCCGAAAAGTCCCTGGAGATTATGGACTGCCATTAGTTGGTCCA
TGGAAAGACAGACTTGATTACTTTTACAATCAGGGCAAAAATGAGTTTTTCAAATCAAGA
ATTCAGAAGCATCAGTCTACTGTTTTTCGAACGAACATGCCACCAGGTCCATTCATTTCA
TTCAATCCAAACGTTGTTGTTTTGCTCGATGGTAAAAGTTTTCCCATCCTTTTTGATGTA
TCTAAGGTTGAAAAAAAGGATCTTTTCACCGGTACTTTCATGCCCTCCACTGATCTCACA
GGCGGTTATCGTGTTCTCTCCTATCTTGATCCTTCCGAACCAAACCATGCCAAATTGAAG
AAACTCATGTTTTATCTCCTTTCATCACGGCGCAATGAAGTTATTCCAGAGTTTCACAAT
AGCTACTCCGAGCTATTTGAAACTCTGGAAAACGAACTCTCCACGAAAGGGAAAGCCAGG
CTCAATGCAGCAAATGATCAAGCTGCATTTAACTTCCTGGCTAGATCCTTATATGGCATT
AATCCTCAAGACACCAAACTTGGAACCGATGGACCTAAGTTGATCGGCAAATGGGTGCTG
TTCCAGCTTCATCCTTTGCTAATTCTCGGCCTCCCGAAGGTTCTTGAAGACCTTGTTATG
CACACTTTCAGACTTCCCCCTGCCTTGGTGAAAAAAGACTACCAGAGATTGTACAATTTC
TTCTATGAAAACTCAACTTCCGTTCTTGATGAAGCAGAAAAAATTGGCATTTCTCGCGAA
GAAGCTTGTCACAATTTGCTATTCGCAACATGTTTCAATTCATTCGGAGGGATCAAAATC
TTTTTCCCCAATATGTTGAAATGGATAGGCAGAGCAGGGGCTAAACTCCACAGCCAATTA
GCTCAAGAAATTCGTTCAGTCATTTCATCAAACAGTGGGAAGGTCACAATGGCTGCCATG
GAAAAAATGCCATTAATGAAATCAGTAGTCTACGAATCCCTCAGAATTGAACCCCCAGTA
GCATCACAATACGGCAGAGCAAAACACGACATGGTAATCGAATCCCACGACGCATCATTC
GAGATCAAAGAAGGTGAACTCCTTTATGGGTTTCAACCATTTGCAACCAAAGACCCAAAA
ATCTTCGACCGATCGGAAGAGTTCGTCGCCGATCGGTTCATCGGAGAAGAAGGAGAGAAG
CTGTTGAAACACGTGTTATGGTCAAATGGGTCGGAAACAGAGAACCCATCGATAAATAAC
AAACAGTGTGCCGGAAAAGACTTCGTCGTACTGGTTTCAAGATTGTTGTTGGTCGAATTG
TTCCTCCGATATGATTCGTTTGAGATTGAGGTCGGTGCATCTCCATTAGGAGCTGCAATT
ACCTTAACTTCTCTGAGAAGAGCCAGTTTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029511
PEP Infomation

pacid=37472915 transcript=PGSC0003DMT400043495 locus=PGSC0003DMG400016887 ID=PGSC0003DMT400043495.v4.03 annot-version=v4.03
Sequence

MASTSLALPSLKLQFPSHKSSSSRKNSSSHRVSIRPIQASVSERPPYISSPSPSPSPPVK
QAKLPTRKVPGDYGLPLVGPWKDRLDYFYNQGKNEFFKSRIQKHQSTVFRTNMPPGPFIS
FNPNVVVLLDGKSFPILFDVSKVEKKDLFTGTFMPSTDLTGGYRVLSYLDPSEPNHAKLK
KLMFYLLSSRRNEVIPEFHNSYSELFETLENELSTKGKARLNAANDQAAFNFLARSLYGI
NPQDTKLGTDGPKLIGKWVLFQLHPLLILGLPKVLEDLVMHTFRLPPALVKKDYQRLYNF
FYENSTSVLDEAEKIGISREEACHNLLFATCFNSFGGIKIFFPNMLKWIGRAGAKLHSQL
AQEIRSVISSNSGKVTMAAMEKMPLMKSVVYESLRIEPPVASQYGRAKHDMVIESHDASF
EIKEGELLYGFQPFATKDPKIFDRSEEFVADRFIGEEGEKLLKHVLWSNGSETENPSINN
KQCAGKDFVVLVSRLLLVELFLRYDSFEIEVGASPLGAAITLTSLRRASF*

Transcript Sequence

Transcript ID

PGSC0003DMT400043495
Transcript Infomation

pacid=37472915 locus=PGSC0003DMG400016887 ID=PGSC0003DMT400043495.v4.03 annot-version=v4.03
Sequence

ATGGCATCAACTTCTCTTGCTCTTCCTTCTCTTAAGCTACAATTCCCCTCACATAAATCA
TCATCTTCTCGTAAAAATTCATCGTCTCATCGTGTTAGTATTCGTCCCATTCAGGCTTCA
GTGTCTGAGAGACCGCCATACATTTCATCACCATCACCATCACCATCGCCACCTGTTAAA
CAAGCAAAACTCCCAACCCGAAAAGTCCCTGGAGATTATGGACTGCCATTAGTTGGTCCA
TGGAAAGACAGACTTGATTACTTTTACAATCAGGGCAAAAATGAGTTTTTCAAATCAAGA
ATTCAGAAGCATCAGTCTACTGTTTTTCGAACGAACATGCCACCAGGTCCATTCATTTCA
TTCAATCCAAACGTTGTTGTTTTGCTCGATGGTAAAAGTTTTCCCATCCTTTTTGATGTA
TCTAAGGTTGAAAAAAAGGATCTTTTCACCGGTACTTTCATGCCCTCCACTGATCTCACA
GGCGGTTATCGTGTTCTCTCCTATCTTGATCCTTCCGAACCAAACCATGCCAAATTGAAG
AAACTCATGTTTTATCTCCTTTCATCACGGCGCAATGAAGTTATTCCAGAGTTTCACAAT
AGCTACTCCGAGCTATTTGAAACTCTGGAAAACGAACTCTCCACGAAAGGGAAAGCCAGG
CTCAATGCAGCAAATGATCAAGCTGCATTTAACTTCCTGGCTAGATCCTTATATGGCATT
AATCCTCAAGACACCAAACTTGGAACCGATGGACCTAAGTTGATCGGCAAATGGGTGCTG
TTCCAGCTTCATCCTTTGCTAATTCTCGGCCTCCCGAAGGTTCTTGAAGACCTTGTTATG
CACACTTTCAGACTTCCCCCTGCCTTGGTGAAAAAAGACTACCAGAGATTGTACAATTTC
TTCTATGAAAACTCAACTTCCGTTCTTGATGAAGCAGAAAAAATTGGCATTTCTCGCGAA
GAAGCTTGTCACAATTTGCTATTCGCAACATGTTTCAATTCATTCGGAGGGATCAAAATC
TTTTTCCCCAATATGTTGAAATGGATAGGCAGAGCAGGGGCTAAACTCCACAGCCAATTA
GCTCAAGAAATTCGTTCAGTCATTTCATCAAACAGTGGGAAGGTCACAATGGCTGCCATG
GAAAAAATGCCATTAATGAAATCAGTAGTCTACGAATCCCTCAGAATTGAACCCCCAGTA
GCATCACAATACGGCAGAGCAAAACACGACATGGTAATCGAATCCCACGACGCATCATTC
GAGATCAAAGAAGGTGAACTCCTTTATGGGTTTCAACCATTTGCAACCAAAGACCCAAAA
ATCTTCGACCGATCGGAAGAGTTCGTCGCCGATCGGTTCATCGGAGAAGAAGGAGAGAAG
CTGTTGAAACACGTGTTATGGTCAAATGGGTCGGAAACAGAGAACCCATCGATAAATAAC
AAACAGTGTGCCGGAAAAGACTTCGTCGTACTGGTTTCAAGATTGTTGTTGGTCGAATTG
TTCCTCCGATATGATTCGTTTGAGATTGAGGTCGGTGCATCTCCATTAGGAGCTGCAATT
ACCTTAACTTCTCTGAGAAGAGCCAGTTTTTGA