Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043487
CDS Infomation

pacid=37475956 polypeptide=PGSC0003DMP400029505 locus=PGSC0003DMG400016885 ID=PGSC0003DMT400043487.v4.03 annot-version=v4.03
Sequence

ATGTCGTCGTCGTCGATGTTAAACAACAGTGTCTCTATTGCTGTCTCCGACGACGAGCCC
GACGAATTTGTCAACAAGCTTAGGGCACGAGCTCGAAGGAAGAGAAAGAAAATTGGCCTC
CGAGGCAAAACCAGTTTCTCTCATATTGTCCTGAAAAAGCTCCTCAGGTGGTGGCCTTTT
CTGCTATTCTTACTTGCAGCAGGTCTTCTCCTATTTGAAGCCTCTCGAATTGGAAGAAGA
CCTAGTTCGGTTGTTAAAAATTCGAATCCGGTGACTGGAAATAAAACTAATAAGGTTGTT
GAGAAGAAACCGCCGACGAACTTGAATCGCCTGGATCTAGTGACTCATGTTGTCCATGGA
GTTAGAGAACCTTGCTTGAAGTTACTACCAACTGAAGAGCTTGAGCATCTTGATTTCCCC
ATGGATAAAGTACCTGCCGATCCTATTAAACGGGTGGTATACATCACAGAGGCCAATCCT
GCTTCTGTAGATGATGGTATGTCATTTGAGCAACACTCGGGGGCGTCAAGATTTAATTTA
TTCACAGGAAACCAATCTCTTAAGCAAAGGGATGAAAGTTTTAAGGTGAAAGGAGCGGAT
GCATCCATCCACTGTGGTTTTTACAGTAATAAAGGAGGCTTTAGGATTTCTGTTGAAGAT
AGAAGTTATATGGAATCCTGCAAAGCTGTGGTGTCAACTTGTGCATTTGGTGGTGGAGAT
GATCTCTATCAACCTATAGGAATGTCAGAGTCATCTCTCAAGAAGGTTTGCTTTGTGGCT
TTTTGGGATGAAATTACACTTGCATCACAAGAGGCAGATGGCCATAAAGTTGGCGATGAC
CGTTATATCGGAAAGTGGCGCATCATCCTTGTTAAGAATCTACCATTTACAGATCAAAGG
TTGAATGGTAAAATCCCAAAGATGCTGGCCCATCGTCTCTTTCCGAATTCTAGATATTCC
ATTTGGGTAGACTCAAAATCCCAACTGAGGAGGGATCCGTTGGGTGTGTTGGAAGCTCTG
CTCTGGCGTTCAAACTCTGTACTAGCAATCTCAGAACATGGAGCTCGGAGTAGCGTGTAT
GATGAGGCAAAGGCTGTTGTCAAGAAAAATAAGGCCACTCCAGAGGAAGTGGCCGTGCAG
ATAGCTCAGTACCGTCAAGATGGACTCCCTGAGGATAAGAGATTCAATGGGAAAAAAGCT
CTATCTGAGGCTTCAATTATTGTGAGAGAGCACACACCATCGACTAACCTGCTCATGTGC
CTATGGTTTAATGAGGTGGTTCGCTTTACATCCCGTGATCAACTGAGTTTTCCATATGTC
CTTTGGCGGTTCAAAGAATTCAGGAATATCAACATGTTTCCTGTTTGTACACGCAAGGAT
CTCGTCAATAGCATGGGCCACATAAGAAAAGCAAAGCCTCTAACAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029505
PEP Infomation

pacid=37475956 transcript=PGSC0003DMT400043487 locus=PGSC0003DMG400016885 ID=PGSC0003DMT400043487.v4.03 annot-version=v4.03
Sequence

MSSSSMLNNSVSIAVSDDEPDEFVNKLRARARRKRKKIGLRGKTSFSHIVLKKLLRWWPF
LLFLLAAGLLLFEASRIGRRPSSVVKNSNPVTGNKTNKVVEKKPPTNLNRLDLVTHVVHG
VREPCLKLLPTEELEHLDFPMDKVPADPIKRVVYITEANPASVDDGMSFEQHSGASRFNL
FTGNQSLKQRDESFKVKGADASIHCGFYSNKGGFRISVEDRSYMESCKAVVSTCAFGGGD
DLYQPIGMSESSLKKVCFVAFWDEITLASQEADGHKVGDDRYIGKWRIILVKNLPFTDQR
LNGKIPKMLAHRLFPNSRYSIWVDSKSQLRRDPLGVLEALLWRSNSVLAISEHGARSSVY
DEAKAVVKKNKATPEEVAVQIAQYRQDGLPEDKRFNGKKALSEASIIVREHTPSTNLLMC
LWFNEVVRFTSRDQLSFPYVLWRFKEFRNINMFPVCTRKDLVNSMGHIRKAKPLTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400043487
Transcript Infomation

pacid=37475956 locus=PGSC0003DMG400016885 ID=PGSC0003DMT400043487.v4.03 annot-version=v4.03
Sequence

ATGTCGTCGTCGTCGATGTTAAACAACAGTGTCTCTATTGCTGTCTCCGACGACGAGCCC
GACGAATTTGTCAACAAGCTTAGGGCACGAGCTCGAAGGAAGAGAAAGAAAATTGGCCTC
CGAGGCAAAACCAGTTTCTCTCATATTGTCCTGAAAAAGCTCCTCAGGTGGTGGCCTTTT
CTGCTATTCTTACTTGCAGCAGGTCTTCTCCTATTTGAAGCCTCTCGAATTGGAAGAAGA
CCTAGTTCGGTTGTTAAAAATTCGAATCCGGTGACTGGAAATAAAACTAATAAGGTTGTT
GAGAAGAAACCGCCGACGAACTTGAATCGCCTGGATCTAGTGACTCATGTTGTCCATGGA
GTTAGAGAACCTTGCTTGAAGTTACTACCAACTGAAGAGCTTGAGCATCTTGATTTCCCC
ATGGATAAAGTACCTGCCGATCCTATTAAACGGGTGGTATACATCACAGAGGCCAATCCT
GCTTCTGTAGATGATGGTATGTCATTTGAGCAACACTCGGGGGCGTCAAGATTTAATTTA
TTCACAGGAAACCAATCTCTTAAGCAAAGGGATGAAAGTTTTAAGGTGAAAGGAGCGGAT
GCATCCATCCACTGTGGTTTTTACAGTAATAAAGGAGGCTTTAGGATTTCTGTTGAAGAT
AGAAGTTATATGGAATCCTGCAAAGCTGTGGTGTCAACTTGTGCATTTGGTGGTGGAGAT
GATCTCTATCAACCTATAGGAATGTCAGAGTCATCTCTCAAGAAGGTTTGCTTTGTGGCT
TTTTGGGATGAAATTACACTTGCATCACAAGAGGCAGATGGCCATAAAGTTGGCGATGAC
CGTTATATCGGAAAGTGGCGCATCATCCTTGTTAAGAATCTACCATTTACAGATCAAAGG
TTGAATGGTAAAATCCCAAAGATGCTGGCCCATCGTCTCTTTCCGAATTCTAGATATTCC
ATTTGGGTAGACTCAAAATCCCAACTGAGGAGGGATCCGTTGGGTGTGTTGGAAGCTCTG
CTCTGGCGTTCAAACTCTGTACTAGCAATCTCAGAACATGGAGCTCGGAGTAGCGTGTAT
GATGAGGCAAAGGCTGTTGTCAAGAAAAATAAGGCCACTCCAGAGGAAGTGGCCGTGCAG
ATAGCTCAGTACCGTCAAGATGGACTCCCTGAGGATAAGAGATTCAATGGGAAAAAAGCT
CTATCTGAGGCTTCAATTATTGTGAGAGAGCACACACCATCGACTAACCTGCTCATGTGC
CTATGGTTTAATGAGGTGGTTCGCTTTACATCCCGTGATCAACTGAGTTTTCCATATGTC
CTTTGGCGGTTCAAAGAATTCAGGAATATCAACATGTTTCCTGTTTGTACACGCAAGGAT
CTCGTCAATAGCATGGGCCACATAAGAAAAGCAAAGCCTCTAACAAGTTGA