Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043486
CDS Infomation

pacid=37471819 polypeptide=PGSC0003DMP400029504 locus=PGSC0003DMG400016884 ID=PGSC0003DMT400043486.v4.03 annot-version=v4.03
Sequence

ATGGATGACATGTATGGCAGTGATGAAGAATACTATAATGGAGAATACGAGGATGATTAT
GATCGTGACCCGGAACCTGAATCTGATGATGATTTATCATGTGGCAAAGCTCCTTCATGC
AGGGTAATAAGGAAGGAATCCCTTTTAGCAGCACAGAAAGAAGATCTACAGAGAGTAGTA
GACTTGCTTTCTCTGAAGGAACATCATGCACGAACATTGCTTATTCATTATCAATGGGAT
GTCGATAAGGTCTTTGCAATTTTTGTTGAAAGAGGGAAAGAAAGATTGTATGTAGAAGCT
GGTATAACACTAGAGGAGCAAAATGACAATCCTTCCTCCGACCCCTCAACTGAATATACA
TGTGAAATTTGCTTTGAAGATTTCCCTGATGAGCAAACGACGTTGATGGAATGCAATCAT
AGGTTTTGCAATGATTGTTGGACAGAGTATTTCATAGTAAAGATCAATGATGGTAAGAGT
AGACGTGTAACATGTATGGCTCAGAAGTGCAAAGCGATATGTGATGAAGGAAAGATTAGG
GATCTAGTCACTGCAAAGGATCCTAATTTGGCGGAGAAGTTTGATCGTTTTATCCTGGAA
TCATATATCGAGGATAATAAGAGGGTTAAATGGTGTCCTAGTGTTCCTCATTGTGGAAAT
GCAATTCGTGTTGAGGATGACGAGTACTGTGAAGTTGAATGTGCATGTGGTCAGCAATTC
TGTTTTAACTGCTCGTGCGAACTGCACTCACCTTGTTCGTGTGTTATGTGGGACCTTTGG
CTTAAGAAGTGTGACGATGAAGCACCCACTGTCAATTGGTTGTCAGAGAAAACCAAGCAT
TGCCCAAAATGTCATAAAATTGTGGAGAAGGATGGAGGATGCAACCTGGTACAGTGTATA
TGTGGACAGCCATTTTGTTGGCTCTGTGGTGAAGCTACTGGATTTGAGCACACATGGAAT
AGTATATCAGGTCACACTTGTGGCAGATACAAAGAAACTCATTTGAAAAGTGAAGATTCT
GTAGAGGACTATTGGCGTCTTACTCACTATTATCGTCGTTATAAGGCTCATATTGATTCG
TTGAAGATTGAAGCATCTGAATCGAAGAAAAAAATACTTGATAAAGTCCATAGCCTTGAA
GCAAAGGAGTTCCAGTTAAAAGATTTCAGCTGGGCAATGAGTGGATTCCATAGACTCGCC
TTATCAAGGCGAGTTGTCGCCTGTTCCTATCCATTTGCATACTACTATTTTGGAGATCTG
TTTGCGAATGAAATAACAAAAGAAGAAAGGGAAATAAAACAGAACCTTTTTGAGGATCAA
CAGCAGCAACTTGAAACAAATATCGAAAGACTTTCAATGTTCTTGGAAGAGCCATTTGGT
AACTATGCTGAAGATAAGCTTGTTGAGACAAGAATGAAGATTATTACTCTCTCCACAGTA
ACTGATGACCTCTGCAAAAACTTGTACGAGTGCATTGACAACGATTTGCTAGTTCCTCTA
CAACAAGCAACTCATACAATAGTTCGTTATAGATCCAATGGTGTGGAAAAAGCATCAGAA
CTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400029504
PEP Infomation

pacid=37471819 transcript=PGSC0003DMT400043486 locus=PGSC0003DMG400016884 ID=PGSC0003DMT400043486.v4.03 annot-version=v4.03
Sequence

MDDMYGSDEEYYNGEYEDDYDRDPEPESDDDLSCGKAPSCRVIRKESLLAAQKEDLQRVV
DLLSLKEHHARTLLIHYQWDVDKVFAIFVERGKERLYVEAGITLEEQNDNPSSDPSTEYT
CEICFEDFPDEQTTLMECNHRFCNDCWTEYFIVKINDGKSRRVTCMAQKCKAICDEGKIR
DLVTAKDPNLAEKFDRFILESYIEDNKRVKWCPSVPHCGNAIRVEDDEYCEVECACGQQF
CFNCSCELHSPCSCVMWDLWLKKCDDEAPTVNWLSEKTKHCPKCHKIVEKDGGCNLVQCI
CGQPFCWLCGEATGFEHTWNSISGHTCGRYKETHLKSEDSVEDYWRLTHYYRRYKAHIDS
LKIEASESKKKILDKVHSLEAKEFQLKDFSWAMSGFHRLALSRRVVACSYPFAYYYFGDL
FANEITKEEREIKQNLFEDQQQQLETNIERLSMFLEEPFGNYAEDKLVETRMKIITLSTV
TDDLCKNLYECIDNDLLVPLQQATHTIVRYRSNGVEKASEL*

Transcript Sequence

Transcript ID

PGSC0003DMT400043486
Transcript Infomation

pacid=37471819 locus=PGSC0003DMG400016884 ID=PGSC0003DMT400043486.v4.03 annot-version=v4.03
Sequence

ATGGATGACATGTATGGCAGTGATGAAGAATACTATAATGGAGAATACGAGGATGATTAT
GATCGTGACCCGGAACCTGAATCTGATGATGATTTATCATGTGGCAAAGCTCCTTCATGC
AGGGTAATAAGGAAGGAATCCCTTTTAGCAGCACAGAAAGAAGATCTACAGAGAGTAGTA
GACTTGCTTTCTCTGAAGGAACATCATGCACGAACATTGCTTATTCATTATCAATGGGAT
GTCGATAAGGTCTTTGCAATTTTTGTTGAAAGAGGGAAAGAAAGATTGTATGTAGAAGCT
GGTATAACACTAGAGGAGCAAAATGACAATCCTTCCTCCGACCCCTCAACTGAATATACA
TGTGAAATTTGCTTTGAAGATTTCCCTGATGAGCAAACGACGTTGATGGAATGCAATCAT
AGGTTTTGCAATGATTGTTGGACAGAGTATTTCATAGTAAAGATCAATGATGGTAAGAGT
AGACGTGTAACATGTATGGCTCAGAAGTGCAAAGCGATATGTGATGAAGGAAAGATTAGG
GATCTAGTCACTGCAAAGGATCCTAATTTGGCGGAGAAGTTTGATCGTTTTATCCTGGAA
TCATATATCGAGGATAATAAGAGGGTTAAATGGTGTCCTAGTGTTCCTCATTGTGGAAAT
GCAATTCGTGTTGAGGATGACGAGTACTGTGAAGTTGAATGTGCATGTGGTCAGCAATTC
TGTTTTAACTGCTCGTGCGAACTGCACTCACCTTGTTCGTGTGTTATGTGGGACCTTTGG
CTTAAGAAGTGTGACGATGAAGCACCCACTGTCAATTGGTTGTCAGAGAAAACCAAGCAT
TGCCCAAAATGTCATAAAATTGTGGAGAAGGATGGAGGATGCAACCTGGTACAGTGTATA
TGTGGACAGCCATTTTGTTGGCTCTGTGGTGAAGCTACTGGATTTGAGCACACATGGAAT
AGTATATCAGGTCACACTTGTGGCAGATACAAAGAAACTCATTTGAAAAGTGAAGATTCT
GTAGAGGACTATTGGCGTCTTACTCACTATTATCGTCGTTATAAGGCTCATATTGATTCG
TTGAAGATTGAAGCATCTGAATCGAAGAAAAAAATACTTGATAAAGTCCATAGCCTTGAA
GCAAAGGAGTTCCAGTTAAAAGATTTCAGCTGGGCAATGAGTGGATTCCATAGACTCGCC
TTATCAAGGCGAGTTGTCGCCTGTTCCTATCCATTTGCATACTACTATTTTGGAGATCTG
TTTGCGAATGAAATAACAAAAGAAGAAAGGGAAATAAAACAGAACCTTTTTGAGGATCAA
CAGCAGCAACTTGAAACAAATATCGAAAGACTTTCAATGTTCTTGGAAGAGCCATTTGGT
AACTATGCTGAAGATAAGCTTGTTGAGACAAGAATGAAGATTATTACTCTCTCCACAGTA
ACTGATGACCTCTGCAAAAACTTGTACGAGTGCATTGACAACGATTTGCTAGTTCCTCTA
CAACAAGCAACTCATACAATAGTTCGTTATAGATCCAATGGTGTGGAAAAAGCATCAGAA
CTATAG