Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043474
CDS Infomation

pacid=37472515 polypeptide=PGSC0003DMP400029494 locus=PGSC0003DMG400016880 ID=PGSC0003DMT400043474.v4.03 annot-version=v4.03
Sequence

ATGAAGCCACAAAGACAGCTCCCTTTACTATTTATTTTCATTTCTTTTTTCATCACCACC
ACCGCCGCCGCCAGTATTCGCAATGCCGCCGCTGCGCCACCGCAACAGTTCAGAGAAGCT
CCTGAATTCTACAACTCAGCTGAATGTCCTTCAATTGAAAATACCCATGAATTAATTTGC
TCCGAGGAAACTGTTCATGCAGCAATGACACTTGATTCCGCTTATATCCGTGGATCAATG
GCTGCTATTCTCTCTATTCTTCAACATTCTTCTTGCCCACAAAACATAATTTTTCACTTC
GTTGCTTCTGCCTCCGCAGACGCGTCACATCTACGCGCCACCATTTTAGCTTCCTTTCCT
TATTTGAAATTCGAAGTTTATCGATTTGATGATTCCTCTGTTTCTGGCCTAATTTCTACT
TCTATTCGTTCAGCTCTCGATTGCCCTTTGAACTATGCGAGAAGTTACTTAGCTAATATT
TTACCTTTATGTGTTCGGAAAGTTGTGTATTTGGATTCCGATTTGGTTTTAGTTGACGAT
ATTGCGAAACTATCAGCAACTCCACTTGGGGAAAATCAAATCCTTGCTGCTCCTGAATAC
TGTAATGCGAATTTCACTTCGTATTTTACTCCAACTTTCTGGTCTAACCCATCTCTATCT
CTTACATTTGCGGATCGGAAAGCTTGTTATTTCAACACAGGGGTAATGGTAATCGATCTC
GATCGATGGAGAAACGGTGATTACACAAGGAAGATTGAAGAATGGATGGAATTACAAAAA
CGTATGAGAATTTACGAATTGGGTTCGTTACCGCCGTTTTTACTTGTGTTCGCCGGAGAT
ATAGCTCCGGTAGATCATAAATGGAATCAGCATGGACTTGGTGGAGACAATTTTCGAGGA
CTCTGTAGAGATTTACATCCGGGTCCGGTAAGTTTACTGCATTGGAGTGGAAAAGGAAAA
CCTTGGGCTCGGCTTGATGCTAATCGGCCATGTCCGTTAGATGCTCTTTGGGCTCCTTAT
GATCTGTTAAAACTTCCATTTTCGTTCGATTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029494
PEP Infomation

pacid=37472515 transcript=PGSC0003DMT400043474 locus=PGSC0003DMG400016880 ID=PGSC0003DMT400043474.v4.03 annot-version=v4.03
Sequence

MKPQRQLPLLFIFISFFITTTAAASIRNAAAAPPQQFREAPEFYNSAECPSIENTHELIC
SEETVHAAMTLDSAYIRGSMAAILSILQHSSCPQNIIFHFVASASADASHLRATILASFP
YLKFEVYRFDDSSVSGLISTSIRSALDCPLNYARSYLANILPLCVRKVVYLDSDLVLVDD
IAKLSATPLGENQILAAPEYCNANFTSYFTPTFWSNPSLSLTFADRKACYFNTGVMVIDL
DRWRNGDYTRKIEEWMELQKRMRIYELGSLPPFLLVFAGDIAPVDHKWNQHGLGGDNFRG
LCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWAPYDLLKLPFSFDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400043474
Transcript Infomation

pacid=37472515 locus=PGSC0003DMG400016880 ID=PGSC0003DMT400043474.v4.03 annot-version=v4.03
Sequence

ATGAAGCCACAAAGACAGCTCCCTTTACTATTTATTTTCATTTCTTTTTTCATCACCACC
ACCGCCGCCGCCAGTATTCGCAATGCCGCCGCTGCGCCACCGCAACAGTTCAGAGAAGCT
CCTGAATTCTACAACTCAGCTGAATGTCCTTCAATTGAAAATACCCATGAATTAATTTGC
TCCGAGGAAACTGTTCATGCAGCAATGACACTTGATTCCGCTTATATCCGTGGATCAATG
GCTGCTATTCTCTCTATTCTTCAACATTCTTCTTGCCCACAAAACATAATTTTTCACTTC
GTTGCTTCTGCCTCCGCAGACGCGTCACATCTACGCGCCACCATTTTAGCTTCCTTTCCT
TATTTGAAATTCGAAGTTTATCGATTTGATGATTCCTCTGTTTCTGGCCTAATTTCTACT
TCTATTCGTTCAGCTCTCGATTGCCCTTTGAACTATGCGAGAAGTTACTTAGCTAATATT
TTACCTTTATGTGTTCGGAAAGTTGTGTATTTGGATTCCGATTTGGTTTTAGTTGACGAT
ATTGCGAAACTATCAGCAACTCCACTTGGGGAAAATCAAATCCTTGCTGCTCCTGAATAC
TGTAATGCGAATTTCACTTCGTATTTTACTCCAACTTTCTGGTCTAACCCATCTCTATCT
CTTACATTTGCGGATCGGAAAGCTTGTTATTTCAACACAGGGGTAATGGTAATCGATCTC
GATCGATGGAGAAACGGTGATTACACAAGGAAGATTGAAGAATGGATGGAATTACAAAAA
CGTATGAGAATTTACGAATTGGGTTCGTTACCGCCGTTTTTACTTGTGTTCGCCGGAGAT
ATAGCTCCGGTAGATCATAAATGGAATCAGCATGGACTTGGTGGAGACAATTTTCGAGGA
CTCTGTAGAGATTTACATCCGGGTCCGGTAAGTTTACTGCATTGGAGTGGAAAAGGAAAA
CCTTGGGCTCGGCTTGATGCTAATCGGCCATGTCCGTTAGATGCTCTTTGGGCTCCTTAT
GATCTGTTAAAACTTCCATTTTCGTTCGATTCTTGA