Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043469
CDS Infomation

pacid=37472849 polypeptide=PGSC0003DMP400029489 locus=PGSC0003DMG400016878 ID=PGSC0003DMT400043469.v4.03 annot-version=v4.03
Sequence

ATGGCGATTCGCCGGATTTTAGCGAAACGCTTATCTAGTACCCTAAAATTAGATCCGCTT
CCACCTCTTACGGTTCTAGAACGTTCTCACATTCCGGCGACACCGCCGGATTCCGTCAAC
GGTGATTTCTTCCGACGGTTTCTCCAGAGGAGAGAAATCAATCATGTGGCGAGACTGCCG
GAGTTTTTATCTATTCCGGTTGGAGAAAAATTGAGAGAGAAATTGAGATCTATGAATGTT
ACCGGAGAAAGGATTAGATTCGAACGCCTAGCTCCACCGGCTCCATCTACGGCAACGGCG
TTGCTGCCGGCGGAGACGATGGGGAAGATAACCGTGAATGATGCTAAGAAGATATTGAAA
ATTTCGCAGTTGGAGAAAGTGAAATCGAGACTGAGAGAGATACCGATGAACTCAATTTCG
TACTCCGAATTCGTTGAGATTTGTGATGAATTTTGTTGTAACAGAGAACAGAGCTTGGAT
TTCGCAAAAATGTTGGACGAATCCGGTAGCGTCATCGTTTTGGGTGACGTCGTTTTTCTC
CGTCCATATCAGGTGGCAAAATCAATGAACAAAATAATATCAGAATCCATAGCATCACCA
AACGACCCAAGAAGAAGAGAACTTGAACAAATGGAAAAACAAAAGGCCTTGATTGATCAA
AAAGCCCAATCACTTGTAAGAGGTGAACTTTACTTTGGGCTGGGCTTTTTAGTTCTCCAA
ACATTGGGCTTTATGAGGTTAACATTTTGGGAATTGACTTGGGATGTGATGGAGCCCATT
TGCTTTTTTGTGACTTCAATTCACGTTGTTCTTGCATATGGATTCTTCTTAAGAACATCA
ACAGAGCCCACTTTTGAAGGGTATTTCCAAAGACGATTCAAAGTTAAACAAAAGAACCTC
ATGAAGTCATACGATTTCGATCTCGAAAAGTATAATAAACTACGAGAAGTATTTTATCCA
ACTTATAATAACCAAACATATTATGGATTTTCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400029489
PEP Infomation

pacid=37472849 transcript=PGSC0003DMT400043469 locus=PGSC0003DMG400016878 ID=PGSC0003DMT400043469.v4.03 annot-version=v4.03
Sequence

MAIRRILAKRLSSTLKLDPLPPLTVLERSHIPATPPDSVNGDFFRRFLQRREINHVARLP
EFLSIPVGEKLREKLRSMNVTGERIRFERLAPPAPSTATALLPAETMGKITVNDAKKILK
ISQLEKVKSRLREIPMNSISYSEFVEICDEFCCNREQSLDFAKMLDESGSVIVLGDVVFL
RPYQVAKSMNKIISESIASPNDPRRRELEQMEKQKALIDQKAQSLVRGELYFGLGFLVLQ
TLGFMRLTFWELTWDVMEPICFFVTSIHVVLAYGFFLRTSTEPTFEGYFQRRFKVKQKNL
MKSYDFDLEKYNKLREVFYPTYNNQTYYGFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400043469
Transcript Infomation

pacid=37472849 locus=PGSC0003DMG400016878 ID=PGSC0003DMT400043469.v4.03 annot-version=v4.03
Sequence

ATGGCGATTCGCCGGATTTTAGCGAAACGCTTATCTAGTACCCTAAAATTAGATCCGCTT
CCACCTCTTACGGTTCTAGAACGTTCTCACATTCCGGCGACACCGCCGGATTCCGTCAAC
GGTGATTTCTTCCGACGGTTTCTCCAGAGGAGAGAAATCAATCATGTGGCGAGACTGCCG
GAGTTTTTATCTATTCCGGTTGGAGAAAAATTGAGAGAGAAATTGAGATCTATGAATGTT
ACCGGAGAAAGGATTAGATTCGAACGCCTAGCTCCACCGGCTCCATCTACGGCAACGGCG
TTGCTGCCGGCGGAGACGATGGGGAAGATAACCGTGAATGATGCTAAGAAGATATTGAAA
ATTTCGCAGTTGGAGAAAGTGAAATCGAGACTGAGAGAGATACCGATGAACTCAATTTCG
TACTCCGAATTCGTTGAGATTTGTGATGAATTTTGTTGTAACAGAGAACAGAGCTTGGAT
TTCGCAAAAATGTTGGACGAATCCGGTAGCGTCATCGTTTTGGGTGACGTCGTTTTTCTC
CGTCCATATCAGGTGGCAAAATCAATGAACAAAATAATATCAGAATCCATAGCATCACCA
AACGACCCAAGAAGAAGAGAACTTGAACAAATGGAAAAACAAAAGGCCTTGATTGATCAA
AAAGCCCAATCACTTGTAAGAGGTGAACTTTACTTTGGGCTGGGCTTTTTAGTTCTCCAA
ACATTGGGCTTTATGAGGTTAACATTTTGGGAATTGACTTGGGATGTGATGGAGCCCATT
TGCTTTTTTGTGACTTCAATTCACGTTGTTCTTGCATATGGATTCTTCTTAAGAACATCA
ACAGAGCCCACTTTTGAAGGGTATTTCCAAAGACGATTCAAAGTTAAACAAAAGAACCTC
ATGAAGTCATACGATTTCGATCTCGAAAAGTATAATAAACTACGAGAAGTATTTTATCCA
ACTTATAATAACCAAACATATTATGGATTTTCTTAG