Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400043395
CDS Infomation

pacid=37455659 polypeptide=PGSC0003DMP400029439 locus=PGSC0003DMG400016844 ID=PGSC0003DMT400043395.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGTTGCAGAGGGAGGAGGAGAGGCAGGAGGAGCAGCAGAGCGAAGAGAGCGTG
AAGTTGTTTGTAGGTCAAGTACCGAAGCACATGACGGAATCACAACTTGTCGAAATGTTT
CAAGAGTTTGCTATTGTTGATGAAGTCAACATCATCAAAGACAAAACTACGCGTGCTTCT
CGAGGCTGTTGTTTTGTGATCTGTCCATCTAGAGAAGAAGCGGATAAGGCAGTTAATGCA
TGCCACAACAAAAAGACGCTTCCCGGGGCTTCTAGTCCGTTGCAAGTGAAGTATGCTGAT
GGCGAGTTGGAAAGACTAGAGCACAAGCTTTTTGTTGGTATGCTTCCAAAGAATGTCTCT
GATCCTGAAGTATCTGCCTTGTTCTCTCAATATGGAGTCATTAAAGATTTGCAGATTCTC
AGAGGTTCTCAGCAAACTAGTAAAGGATGTGCTTTTCTGAAGTATGAGAAAAAAGAACAA
GCAGTTGCAGCAATAGATGCCCTCCATGGAAAGCATAAGATGGAGGGTGCTACTGTCCCT
TTGGTAGTCAAATGGGCAGATACTGAAAAGGAAAGGCAAGCCCGGAGGGCTCAGAAATCT
ATATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAGCCCTACCTATGGGC
TACATGCCACCATACAATGGCTATGGTTATCAGACTCCTGGGGCATATGGGCTCATGCAG
TATCGCCTACCATCAATGCAGAATCAGTCCGCATTTCAGAATATAGTCCCACCAATAAAC
CAAGCAAGTGCTCTACGTGGAGGTGCACCTGATCTTTCGCCTGGAATTAGCCCAAGAAAT
TATGCCATGTCACCTGGAAGTTATGGATCCGCTTACCCTGCTGTTCCAGGGATTCAGTAT
TCAATGCCATATCCTGGAGGTGTTATGAATGCCAGACCACCAAGTGGTTCTCCTGGTTCA
ATTCCCCCTAGTACGACCAACAGTCATTCTGCAGCATCTTCAAGTGTCAGTTCAAGTACA
GGGGGTCAGGTTGAAGGTCCACCTGGTGCTAATCTATTTATTTACCATATTCCTCAAGAA
TTTGGTGATCAAGAGCTTGCAAATGCATTTCAGCCTTTTGGTAGGGTTTTGAGTGCCAAG
GTTTTCGTTGACAAAGCAACTGGTGTTAGCAAATGTTTTGGATTTGTAAGTTATGACTCT
ACAGCAGCTGCACAAACTGCAATCAGTATGATGAATGGTTGCCAATTAGGTAGTAAGAAG
TTGAAGGTTCAGCTTAAAAGGGACAACAAACAGAATAAACATTATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400029439
PEP Infomation

pacid=37455659 transcript=PGSC0003DMT400043395 locus=PGSC0003DMG400016844 ID=PGSC0003DMT400043395.v4.03 annot-version=v4.03
Sequence

MAELQREEERQEEQQSEESVKLFVGQVPKHMTESQLVEMFQEFAIVDEVNIIKDKTTRAS
RGCCFVICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVS
DPEVSALFSQYGVIKDLQILRGSQQTSKGCAFLKYEKKEQAVAAIDALHGKHKMEGATVP
LVVKWADTEKERQARRAQKSISHASDSRQHPSLFGALPMGYMPPYNGYGYQTPGAYGLMQ
YRLPSMQNQSAFQNIVPPINQASALRGGAPDLSPGISPRNYAMSPGSYGSAYPAVPGIQY
SMPYPGGVMNARPPSGSPGSIPPSTTNSHSAASSSVSSSTGGQVEGPPGANLFIYHIPQE
FGDQELANAFQPFGRVLSAKVFVDKATGVSKCFGFVSYDSTAAAQTAISMMNGCQLGSKK
LKVQLKRDNKQNKHY*

Transcript Sequence

Transcript ID

PGSC0003DMT400043395
Transcript Infomation

pacid=37455659 locus=PGSC0003DMG400016844 ID=PGSC0003DMT400043395.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGTTGCAGAGGGAGGAGGAGAGGCAGGAGGAGCAGCAGAGCGAAGAGAGCGTG
AAGTTGTTTGTAGGTCAAGTACCGAAGCACATGACGGAATCACAACTTGTCGAAATGTTT
CAAGAGTTTGCTATTGTTGATGAAGTCAACATCATCAAAGACAAAACTACGCGTGCTTCT
CGAGGCTGTTGTTTTGTGATCTGTCCATCTAGAGAAGAAGCGGATAAGGCAGTTAATGCA
TGCCACAACAAAAAGACGCTTCCCGGGGCTTCTAGTCCGTTGCAAGTGAAGTATGCTGAT
GGCGAGTTGGAAAGACTAGAGCACAAGCTTTTTGTTGGTATGCTTCCAAAGAATGTCTCT
GATCCTGAAGTATCTGCCTTGTTCTCTCAATATGGAGTCATTAAAGATTTGCAGATTCTC
AGAGGTTCTCAGCAAACTAGTAAAGGATGTGCTTTTCTGAAGTATGAGAAAAAAGAACAA
GCAGTTGCAGCAATAGATGCCCTCCATGGAAAGCATAAGATGGAGGGTGCTACTGTCCCT
TTGGTAGTCAAATGGGCAGATACTGAAAAGGAAAGGCAAGCCCGGAGGGCTCAGAAATCT
ATATCTCATGCTTCCGACTCTAGACAGCATCCCTCTTTGTTTGGAGCCCTACCTATGGGC
TACATGCCACCATACAATGGCTATGGTTATCAGACTCCTGGGGCATATGGGCTCATGCAG
TATCGCCTACCATCAATGCAGAATCAGTCCGCATTTCAGAATATAGTCCCACCAATAAAC
CAAGCAAGTGCTCTACGTGGAGGTGCACCTGATCTTTCGCCTGGAATTAGCCCAAGAAAT
TATGCCATGTCACCTGGAAGTTATGGATCCGCTTACCCTGCTGTTCCAGGGATTCAGTAT
TCAATGCCATATCCTGGAGGTGTTATGAATGCCAGACCACCAAGTGGTTCTCCTGGTTCA
ATTCCCCCTAGTACGACCAACAGTCATTCTGCAGCATCTTCAAGTGTCAGTTCAAGTACA
GGGGGTCAGGTTGAAGGTCCACCTGGTGCTAATCTATTTATTTACCATATTCCTCAAGAA
TTTGGTGATCAAGAGCTTGCAAATGCATTTCAGCCTTTTGGTAGGGTTTTGAGTGCCAAG
GTTTTCGTTGACAAAGCAACTGGTGTTAGCAAATGTTTTGGATTTGTAAGTTATGACTCT
ACAGCAGCTGCACAAACTGCAATCAGTATGATGAATGGTTGCCAATTAGGTAGTAAGAAG
TTGAAGGTTCAGCTTAAAAGGGACAACAAACAGAATAAACATTATTGA